SEQF3628.1|RJPX01000024.1	CCTyper	repeat_region	7216	8637	1422	+	.	ID=SEQF3628.1|RJPX01000024.1_1;Genome_ID=SEQF3628.1;Note=Predictor:CCtyper;Start:7216;End:8637;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:22;Repeat_Length:36.0;Average_Spacer_Length:30.0;Repeat_Identity:98.9;Spacer_Identity:45.4;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7216	7251	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT1;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7252	7281	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER1;Parent=SEQF3628.1|RJPX01000024.1_1;Note=ATTTGAACTTCTTTACCGTCAAGGACTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7282	7317	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT2;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7318	7347	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER2;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TAGTCAATCCTGATATTTTCTCCACTCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7348	7383	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT3;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7384	7413	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER3;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GCAAGGTCATTCTCTGTACTTCCGCTATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7414	7449	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT4;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7450	7479	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER4;Parent=SEQF3628.1|RJPX01000024.1_1;Note=ATGTTGCTGGCACTCATGCCCCTCTGTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7480	7515	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT5;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7516	7545	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER5;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TAAATAGATGAATTGCTCCCCTTTCTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7546	7581	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT6;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7582	7611	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER6;Parent=SEQF3628.1|RJPX01000024.1_1;Note=AGATACCAATTGGAATCGGACAAAAGATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7612	7647	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT7;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7648	7677	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER7;Parent=SEQF3628.1|RJPX01000024.1_1;Note=AGCTTTGTTGACGAAATATTGGCCGGAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7678	7713	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT8;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7714	7743	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER8;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TAAATTGCTTGTCAGCTTCCAGTCGCTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7744	7779	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT9;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7780	7809	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER9;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TATGGCTATCCTGGAACAAGCTACAGCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7810	7845	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT10;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7846	7875	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER10;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TTCCATGTTCGTTGCCGTTCCACTATCAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7876	7911	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT11;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7912	7940	29	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER11;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GGAGGTCTTCAAGATATGACTGACCACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	7941	7976	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT12;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	7977	8007	31	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER12;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTACTAGCCATCTTATGCTTAACTGCATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8008	8043	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT13;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8044	8073	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER13;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TATCCTTGAGCGTTTCAAAATCAATAGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8074	8109	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT14;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8110	8139	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER14;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TTAGGTCAGATGTATATCGAGCTAGGGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8140	8175	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT15;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8176	8205	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER15;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TCCACGCATCATTCATCTGCTTCACGGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8206	8241	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT16;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8242	8271	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER16;Parent=SEQF3628.1|RJPX01000024.1_1;Note=CGATGTCTTACAACCTCGTAATAAGTCGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8272	8307	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT17;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8308	8337	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER17;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TCCACGCATCATTCATCTGCTTCACGGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8338	8373	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT18;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8374	8403	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER18;Parent=SEQF3628.1|RJPX01000024.1_1;Note=CGATGTCTTACAACCTCGTAATAAGTCGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8404	8439	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT19;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8440	8469	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER19;Parent=SEQF3628.1|RJPX01000024.1_1;Note=CAAGACCGACCTTTCAGCGCTATCTGAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8470	8505	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT20;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8506	8535	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER20;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TTTCTGCGAGGTCTAGCGCCACTTTGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8536	8571	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT21;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	binding_site	8572	8601	30	+	.	ID=SEQF3628.1|RJPX01000024.1_1_SPACER21;Parent=SEQF3628.1|RJPX01000024.1_1;Note=TTACCGACTGATACAACACCTTCATCATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	direct_repeat	8602	8637	36	+	.	ID=SEQF3628.1|RJPX01000024.1_1_REPEAT22;Parent=SEQF3628.1|RJPX01000024.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	repeat_region	80	774	695	+	.	ID=SEQF3628.1|RJPX01000096.1_2;Genome_ID=SEQF3628.1;Note=Predictor:CCtyper;Start:80;End:774;Consensus_Repeat:TCAGCTTCAACAAGCAACTCAGT;Number_of_Repeats:13;Repeat_Length:23.0;Average_Spacer_Length:33.0;Repeat_Identity:96.7;Spacer_Identity:72.5;Spacer_Length_Sem:1.3;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.334;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	80	102	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT1;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	103	133	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER1;Parent=SEQF3628.1|RJPX01000096.1_2;Note=GAGTGAATCTGCATCTAAACGTACCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	134	156	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT2;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	157	187	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER2;Parent=SEQF3628.1|RJPX01000096.1_2;Note=AAGTGAGTCAGCGTCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	188	210	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT3;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	211	241	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER3;Parent=SEQF3628.1|RJPX01000096.1_2;Note=GAGTGAATCTGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	242	264	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT4;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	265	307	43	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER4;Parent=SEQF3628.1|RJPX01000096.1_2;Note=AAGCGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	308	330	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT5;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	331	361	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER5;Parent=SEQF3628.1|RJPX01000096.1_2;Note=GAGTGAATCTGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	362	384	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT6;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	385	427	43	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER6;Parent=SEQF3628.1|RJPX01000096.1_2;Note=AAGCGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	428	450	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT7;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	451	481	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER7;Parent=SEQF3628.1|RJPX01000096.1_2;Note=GAGTGAGTCAGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	482	504	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT8;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	505	535	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER8;Parent=SEQF3628.1|RJPX01000096.1_2;Note=AAGTGAGTCAGCATCTAAAGTAGNTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	536	558	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT9;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCNTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	559	589	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER9;Parent=SEQF3628.1|RJPX01000096.1_2;Note=NAGTGAGTCNGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	590	612	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT10;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	613	643	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER10;Parent=SEQF3628.1|RJPX01000096.1_2;Note=AAGTGAGTCAGCNTCTAAACGTACCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	644	666	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT11;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	667	697	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER11;Parent=SEQF3628.1|RJPX01000096.1_2;Note=AAGTGAGTCAGCTTCTAAGAAAGCCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	698	720	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT12;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCGGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	binding_site	721	751	31	+	.	ID=SEQF3628.1|RJPX01000096.1_2_SPACER12;Parent=SEQF3628.1|RJPX01000096.1_2;Note=GAGTGAATCTGCATCTAAACTTACCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000096.1	CCTyper	direct_repeat	752	774	23	+	.	ID=SEQF3628.1|RJPX01000096.1_2_REPEAT13;Parent=SEQF3628.1|RJPX01000096.1_2;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	repeat_region	61	772	712	+	.	ID=SEQF3628.1|RJPX01000099.1_3;Genome_ID=SEQF3628.1;Note=Predictor:CCtyper;Start:61;End:772;Consensus_Repeat:AGTCAGCTTCAACAAGCAACTCAGTAAG;Number_of_Repeats:13;Repeat_Length:28.0;Average_Spacer_Length:29.0;Repeat_Identity:93.7;Spacer_Identity:71.1;Spacer_Length_Sem:1.6;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.203;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	61	88	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT1;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	89	126	38	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER1;Parent=SEQF3628.1|RJPX01000099.1_3;Note=CGAATCTGCATCTAAACGTGCTTCAGAAGTAGCTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	127	154	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT2;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AATCAGCTTCAACAAGCAACTCAGTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	155	180	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER2;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCATCTAAAGTAGCTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	181	208	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT3;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	209	234	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER3;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAATCNGCATCTAAACGTACCTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	235	262	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT4;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	263	288	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER4;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCGTCTAAAGTAGCTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	289	316	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT5;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	317	342	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER5;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCGTCTAAAGTAGCTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	343	370	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT6;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	371	396	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER6;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCATCTAAACTTACATCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	397	424	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT7;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AATCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	425	462	38	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER7;Parent=SEQF3628.1|RJPX01000099.1_3;Note=CGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	463	490	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT8;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AATCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	491	516	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER8;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAATCTGCATCTAAAGTAGCTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	517	544	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT9;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	545	582	38	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER9;Parent=SEQF3628.1|RJPX01000099.1_3;Note=CGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	583	610	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT10;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AATCAGCTTCAACAAGCAACTCAGTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	611	636	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER10;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCATCTAAAGTAGNTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	637	664	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT11;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCCTCAACAAGCAACTCAGTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	665	690	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER11;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCATCTAAAGTAGCTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	691	718	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT12;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	binding_site	719	744	26	+	.	ID=SEQF3628.1|RJPX01000099.1_3_SPACER12;Parent=SEQF3628.1|RJPX01000099.1_3;Note=TGAGTCAGCGTCTAAACGTACCTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000099.1	CCTyper	direct_repeat	745	772	28	+	.	ID=SEQF3628.1|RJPX01000099.1_3_REPEAT13;Parent=SEQF3628.1|RJPX01000099.1_3;Note=AGTCAGCTTCAACAAGCAACTCAGTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	repeat_region	78	556	479	+	.	ID=SEQF3628.1|RJPX01000114.1_4;Genome_ID=SEQF3628.1;Note=Predictor:CCtyper;Start:78;End:556;Consensus_Repeat:TCAGCTTCAACAAGCAACTCAGT;Number_of_Repeats:9;Repeat_Length:23.0;Average_Spacer_Length:34.0;Repeat_Identity:100.0;Spacer_Identity:63.0;Spacer_Length_Sem:2.0;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.334;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	78	100	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT1;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	101	131	31	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER1;Parent=SEQF3628.1|RJPX01000114.1_4;Note=GAGTGAATCTGCATCTAAACGTACCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	132	154	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT2;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	155	185	31	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER2;Parent=SEQF3628.1|RJPX01000114.1_4;Note=NAGTGAGTCAGCNTCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	186	208	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT3;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	209	239	31	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER3;Parent=SEQF3628.1|RJPX01000114.1_4;Note=NAGTGANTCNGCATCTAAACTTACATCAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	240	262	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT4;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	263	305	43	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER4;Parent=SEQF3628.1|RJPX01000114.1_4;Note=AAGCGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	306	328	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT5;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	329	359	31	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER5;Parent=SEQF3628.1|RJPX01000114.1_4;Note=GAGTGANTCAGCATCTAAANTNNCATCAGAN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	360	382	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT6;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	383	413	31	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER6;Parent=SEQF3628.1|RJPX01000114.1_4;Note=AAGTGAATCTGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	414	436	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT7;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	437	479	43	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER7;Parent=SEQF3628.1|RJPX01000114.1_4;Note=AAGCGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	480	502	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT8;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	binding_site	503	533	31	+	.	ID=SEQF3628.1|RJPX01000114.1_4_SPACER8;Parent=SEQF3628.1|RJPX01000114.1_4;Note=GAGTGAGTCAGCATCTAAACTTACCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000114.1	CCTyper	direct_repeat	534	556	23	+	.	ID=SEQF3628.1|RJPX01000114.1_4_REPEAT9;Parent=SEQF3628.1|RJPX01000114.1_4;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	repeat_region	35	501	467	+	.	ID=SEQF3628.1|RJPX01000120.1_5;Genome_ID=SEQF3628.1;Note=Predictor:CCtyper;Start:35;End:501;Consensus_Repeat:TCAGCTTCAACAAGCAACTCAGT;Number_of_Repeats:9;Repeat_Length:23.0;Average_Spacer_Length:32.5;Repeat_Identity:95.0;Spacer_Identity:70.3;Spacer_Length_Sem:1.5;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.334;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	35	57	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT1;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	58	88	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER1;Parent=SEQF3628.1|RJPX01000120.1_5;Note=AAGTGAGTCAGCTTCTAAGAAAGCCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	89	111	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT2;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCGGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	112	142	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER2;Parent=SEQF3628.1|RJPX01000120.1_5;Note=GAGTGAATCTGCATCTAAACTTACCTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	143	165	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT3;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	166	196	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER3;Parent=SEQF3628.1|RJPX01000120.1_5;Note=GAGTGAGTCAGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	197	219	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT4;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCGGCTTCAACAAGCAATTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	220	250	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER4;Parent=SEQF3628.1|RJPX01000120.1_5;Note=AAGTGAGTCAGCATCTAAACTTACATCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	251	273	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT5;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	274	304	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER5;Parent=SEQF3628.1|RJPX01000120.1_5;Note=GAGTGAGTCAGCATCTAAACTTACATCAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	305	327	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT6;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	328	358	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER6;Parent=SEQF3628.1|RJPX01000120.1_5;Note=AAGTGAATCTGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	359	381	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT7;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	382	424	43	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER7;Parent=SEQF3628.1|RJPX01000120.1_5;Note=AAGCGAATCAGCATCTAAACGTGCTTCAGAAGTAGCTTCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	425	447	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT8;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	binding_site	448	478	31	+	.	ID=SEQF3628.1|RJPX01000120.1_5_SPACER8;Parent=SEQF3628.1|RJPX01000120.1_5;Note=GAGTGAGTCAGCATCTAAAGTAGCTTCAGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000120.1	CCTyper	direct_repeat	479	501	23	+	.	ID=SEQF3628.1|RJPX01000120.1_5_REPEAT9;Parent=SEQF3628.1|RJPX01000120.1_5;Note=TCAGCTTCAACAAGCAACTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	repeat_region	35335	36033	699	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6;Genome_ID=SEQF3628.1;Note=Predictor:CCtyper;Start:35335;End:36033;Consensus_Repeat:GTTTCCGTCCCCTCTCGAGGCAGATAGGTTCTTATAC;Number_of_Repeats:10;Repeat_Length:33.4;Average_Spacer_Length:40.6;Repeat_Identity:71.5;Spacer_Identity:45.4;Spacer_Length_Sem:2.0;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.988;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35335	35361	27	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT1;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTCGCGAGGTAGATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35362	35410	49	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER1;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=AGTGTTTTACGATAAGCCAGAGTTCACAATAGAGCCTGAAGGGGTTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35411	35446	36	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT2;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=TTTCCGTCCCCTACCGAGGTGAATAGGGTGTTTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35447	35481	35	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER2;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTAAATATCGTTTCACTTGTAGGTCGCACAACTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35482	35504	23	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT3;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTACCGAGGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35505	35553	49	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER3;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=ATTGGGTGGTCTACCAAGAAATTGATACTGCGCAGGAACAAGAAAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35554	35590	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT4;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGGCCCCTCTCAAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35591	35627	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER4;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=TGGAAACGTCGTTATTTATCAGTAAAAGAAGCATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35628	35664	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT5;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35665	35699	35	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER5;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=AATATTGTCGATCAAAATTTCGATGAAAAGAAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35700	35736	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT6;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTCTCGAGGTGAATAGGGTGTCTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35737	35773	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER6;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=AGAAGGATAATTATGAAGAAATTCATGAGCCAGTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35774	35810	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT7;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTCTCGAGGCAGATAGGTTCTTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35811	35846	36	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER7;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=TTATTTTTCAATTAACTTCAGATGAAGAATCTTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35847	35883	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT8;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTCTCGAGGCAGATAGGTTCTTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35884	35924	41	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER8;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=TTGATCGGACACATTAATTTGATTGATGGTGAAATTGTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35925	35950	26	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT9;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTACCGAGGTAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	binding_site	35951	35996	46	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_SPACER9;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=AGTTGTTTTAGACTTTGCATGAAAATGGAATTGTAGATTTTTAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000009.1	CCTyper	direct_repeat	35997	36033	37	+	.	ID=SEQF3628.1|RJPX01000009.1-1_6_REPEAT10;Parent=SEQF3628.1|RJPX01000009.1-1_6;Note=GTTTCCGTCCCCTACCGAGGTGAATAGGGTGTCTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3628.1|RJPX01000024.1	CCTyper	OPERON	8728	19544	10817	-	.	ID=SEQF3628.1|RJPX01000024.1@1;Genome_ID=SEQF3628.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II,AbiEii_0_CAS-III;Positions=10,11,12,13,17;E-values=1.50e-100,8.30e-50,5.10e-102,0.00e+00,4.90e-08;CoverageSeq=0.982,0.93,0.931,0.994,0.524;CoverageHMM=0.995,0.94,0.996,0.998,0.401;Strand_Interference=-1;Strand_Adaptation=-1
SEQF3628.1|RJPX01000009.1	CCTyper	OPERON	26604	41376	14773	-	.	ID=SEQF3628.1|RJPX01000009.1@2;Genome_ID=SEQF3628.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=19.0;Genes=Csm6_1_CAS-III,Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_8_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI,AbiEii_0_CAS-III;Positions=23,24,25,26,27,28,29,30,32,33,37;E-values=5.30e-86,1.00e-69,3.60e-31,3.10e-41,1.50e-72,4.30e-23,9.60e-168,1.20e-27,1.10e-18,5.10e-78,1.00e-04;CoverageSeq=0.858,0.848,0.694,0.987,0.9,0.921,0.83,0.91,0.636,0.941,0.316;CoverageHMM=0.983,0.911,0.685,0.984,0.963,0.982,1.0,0.829,0.873,0.987,0.415;Strand_Interference=-1;Strand_Adaptation=NA
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	40219	41376	386	-	.	ID=SEQF3628.1|RJPX01000009.1_37_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=0.0001;Score=18.9;Coverage_Seq=0.3160621761658031;Coverage_Hmm=0.4154929577464789
SEQF3628.1|RJPX01000024.1	CCTyper	CDS	18864	19544	227	+	.	ID=SEQF3628.1|RJPX01000024.1_17_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=4.9e-08;Score=29.8;Coverage_Seq=0.5242290748898678;Coverage_Hmm=0.4014084507042254
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	32092	34332	747	-	.	ID=SEQF3628.1|RJPX01000009.1_29_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=9.6e-168;Score=556.6;Coverage_Seq=0.8299866131191432;Coverage_Hmm=1.0
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	36457	37470	338	-	.	ID=SEQF3628.1|RJPX01000009.1_33_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.1e-78;Score=259.3;Coverage_Seq=0.9408284023668639;Coverage_Hmm=0.9873817034700315
SEQF3628.1|RJPX01000024.1	CCTyper	CDS	9721	10587	289	-	.	ID=SEQF3628.1|RJPX01000024.1_12_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.1e-102;Score=337.7;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	36128	36457	110	-	.	ID=SEQF3628.1|RJPX01000009.1_32_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-18;Score=64.2;Coverage_Seq=0.6363636363636364;Coverage_Hmm=0.8734177215189873
SEQF3628.1|RJPX01000024.1	CCTyper	CDS	9380	9724	115	-	.	ID=SEQF3628.1|RJPX01000024.1_11_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.3000000000000005e-50;Score=164.9;Coverage_Seq=0.9304347826086956;Coverage_Hmm=0.9396551724137931
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	34313	35044	244	-	.	ID=SEQF3628.1|RJPX01000009.1_30_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas6_8_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.2e-27;Score=94.0;Coverage_Seq=0.9098360655737705;Coverage_Hmm=0.8290909090909091
SEQF3628.1|RJPX01000024.1	CCTyper	CDS	10587	14765	1393	-	.	ID=SEQF3628.1|RJPX01000024.1_13_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1097.5;Coverage_Seq=0.994256999282125;Coverage_Hmm=0.9982142857142857
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	31708	32088	127	-	.	ID=SEQF3628.1|RJPX01000009.1_28_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=4.3e-23;Score=79.4;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	31046	31708	221	-	.	ID=SEQF3628.1|RJPX01000009.1_27_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=1.5e-72;Score=240.8;Coverage_Seq=0.9004524886877828;Coverage_Hmm=0.9627906976744186
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	30139	31044	302	-	.	ID=SEQF3628.1|RJPX01000009.1_26_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=3.1e-41;Score=138.6;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	29063	30142	360	-	.	ID=SEQF3628.1|RJPX01000009.1_25_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=3.5999999999999996e-31;Score=105.7;Coverage_Seq=0.6944444444444444;Coverage_Hmm=0.684931506849315
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	26604	27893	430	-	.	ID=SEQF3628.1|RJPX01000009.1_23_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=5.3000000000000004e-86;Score=285.7;Coverage_Seq=0.858139534883721;Coverage_Hmm=0.9833333333333333
SEQF3628.1|RJPX01000009.1	CCTyper	CDS	27906	29066	387	-	.	ID=SEQF3628.1|RJPX01000009.1_24_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=1e-69;Score=232.1;Coverage_Seq=0.8475452196382429;Coverage_Hmm=0.9111111111111111
SEQF3628.1|RJPX01000024.1	CCTyper	CDS	8728	9390	221	-	.	ID=SEQF3628.1|RJPX01000024.1_10_cas;Genome_ID=SEQF3628.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1.5e-100;Score=332.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973