SEQF3629.1|SWFJ01000002.1	CCTyper	repeat_region	96180	97272	1093	+	.	ID=SEQF3629.1|SWFJ01000002.1_1;Genome_ID=SEQF3629.1;Note=Predictor:CCtyper;Start:96180;End:97272;Consensus_Repeat:GTCTCAATTCCTTATAGGTAAGGTAGAAC;Number_of_Repeats:15;Repeat_Length:29;Average_Spacer_Length:47;Repeat_Identity:87.0;Spacer_Identity:43.3;Spacer_Length_Sem:1.0;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.965;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96180	96208	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT1;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=AAAACAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96209	96249	41	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER1;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=CAAAAGTGTGCGGTGTGTTCGAGTGTGGTGAACTCGAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96250	96278	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT2;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96279	96324	46	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER2;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=TTTATCAAGAGAATTTCCCACAACGTGCTGAGAAGGAGAAATTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96325	96353	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT3;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96354	96395	42	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER3;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=AGATCAATGGGATAAAGAAGCACAAGCTCATTACAACGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96396	96424	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT4;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96425	96473	49	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER4;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=ATACTGCAAAACAAGAGCAGGAGAAATCCAAGGTTGAGGCTGAAACTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96474	96502	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT5;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTTTAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96503	96543	41	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER5;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GATTGCAAAGAACTTTACAAGAGTTCGCCGAAGAGAAAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96544	96572	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT6;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96573	96622	50	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER6;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=ACGTCATTAGTGTATTTGTATATGATGCCTCAAAGCATAGTTTATGCTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96623	96651	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT7;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTATAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96652	96703	52	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER7;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=ATATTGAAGGATATCAAGTGGTATCGAACTATTCATGGATGCCAGACTATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96704	96732	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT8;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96733	96781	49	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER8;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=TCACATCAACTACCAAGAAGAGTGTTTAGATGCCATGGCTCGTATGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96782	96810	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT9;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTATTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96811	96853	43	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER9;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=AAGTTGAACGTATTGCAAGTGGGAATGTTGAAAATACATTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96854	96882	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT10;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96883	96932	50	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER10;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=ACAGTGGTCAACAACATTCCTAAGTTTGAGACTAAGAAAGATATCGTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	96933	96961	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT11;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTATAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	96962	97012	51	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER11;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=TTCCTCCAAAATTAGCATTCCCAAAGAAATAGCAATTAAAATGGGCTACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	97013	97041	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT12;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTATAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	97042	97091	50	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER12;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=ACTTTTTGGCGTTTTGGCTGAATGTGTAAAGGCAGTAGTCTGCAAAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	97092	97120	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT13;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTGTAGGTAAGGTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	97121	97167	47	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER13;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=TTTTGGGGTTTAAACCCTGGCGAAACGGTTAATATCTATAAAGATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	97168	97196	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT14;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	binding_site	97197	97243	47	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_SPACER14;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=AAAGAAGAAAACCGTATCTTTGCGTCTTGGGGTCAGTCAGGTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	direct_repeat	97244	97272	29	+	.	ID=SEQF3629.1|SWFJ01000002.1_1_REPEAT15;Parent=SEQF3629.1|SWFJ01000002.1_1;Note=GTCTCAATTCCTTATAGGTAAGGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3629.1|SWFJ01000002.1	CCTyper	OPERON	92991	108907	15917	-	.	ID=SEQF3629.1|SWFJ01000002.1@2;Genome_ID=SEQF3629.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-B;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-B;Best_score=16.0;Genes=Cas11b_0_CAS-I-B,CorA_0_CAS-III-B-III-D,Cmr6gr7_1_CAS-III-B-III-C,Cmr5gr11_1_CAS-III-B,Cmr4gr7_0_CAS-III-B-III-C,Cmr3gr5_1_CAS-III-B-III-C,Cas10_4_CAS-III,Cmr1gr7_5_CAS-III-B-III-C,Cas6_7_CAS-I-II-III-IV-V-VI,DEDDh_0_CAS-I-II-III-IV-V-VI,Csa3_1_CAS-I-II-III-IV-V-VI;Positions=87,89,90,91,92,93,94,95,96,99,100;E-values=2.40e-03,2.70e-59,4.10e-36,4.30e-35,5.50e-40,5.70e-25,1.90e-36,3.70e-87,1.90e-48,2.60e-22,4.30e-03;CoverageSeq=0.5,0.907,0.757,0.949,0.675,0.5,0.412,0.819,0.992,0.787,0.61;CoverageHMM=0.365,0.835,0.904,0.985,0.61,0.648,0.304,0.997,0.983,0.994,0.602;Strand_Interference=-1;Strand_Adaptation=NA
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	100758	102395	546	-	.	ID=SEQF3629.1|SWFJ01000002.1_94_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cas10_4_CAS-III;coding_strand=-;E-value=1.9000000000000002e-36;Score=122.2;Coverage_Seq=0.41208791208791207;Coverage_Hmm=0.30440414507772023
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	92991	93344	118	-	.	ID=SEQF3629.1|SWFJ01000002.1_87_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cas11b_0_CAS-I-B;coding_strand=-;E-value=0.0024;Score=14.5;Coverage_Seq=0.5;Coverage_Hmm=0.36470588235294116
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	103617	104345	243	-	.	ID=SEQF3629.1|SWFJ01000002.1_96_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cas6_7_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.9e-48;Score=162.3;Coverage_Seq=0.9917695473251029;Coverage_Hmm=0.983402489626556
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	102396	103607	404	-	.	ID=SEQF3629.1|SWFJ01000002.1_95_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cmr1gr7_5_CAS-III-B-III-C;coding_strand=-;E-value=3.7e-87;Score=289.7;Coverage_Seq=0.8193069306930693;Coverage_Hmm=0.9970588235294118
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	99481	100758	426	-	.	ID=SEQF3629.1|SWFJ01000002.1_93_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cmr3gr5_1_CAS-III-B-III-C;coding_strand=-;E-value=5.6999999999999995e-25;Score=85.5;Coverage_Seq=0.5;Coverage_Hmm=0.6481481481481481
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	98776	99477	234	-	.	ID=SEQF3629.1|SWFJ01000002.1_92_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cmr4gr7_0_CAS-III-B-III-C;coding_strand=-;E-value=5.5e-40;Score=134.5;Coverage_Seq=0.6752136752136753;Coverage_Hmm=0.6099290780141844
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	98370	98783	138	-	.	ID=SEQF3629.1|SWFJ01000002.1_91_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cmr5gr11_1_CAS-III-B;coding_strand=-;E-value=4.2999999999999996e-35;Score=117.3;Coverage_Seq=0.9492753623188406;Coverage_Hmm=0.9854014598540146
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	97561	98364	268	-	.	ID=SEQF3629.1|SWFJ01000002.1_90_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Cmr6gr7_1_CAS-III-B-III-C;coding_strand=-;E-value=4.1e-36;Score=121.4;Coverage_Seq=0.7574626865671642;Coverage_Hmm=0.9036697247706422
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	94616	96091	492	-	.	ID=SEQF3629.1|SWFJ01000002.1_89_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : CorA_0_CAS-III-B-III-D;coding_strand=-;E-value=2.7000000000000003e-59;Score=198.0;Coverage_Seq=0.9065040650406504;Coverage_Hmm=0.8348457350272233
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	108416	108907	164	-	.	ID=SEQF3629.1|SWFJ01000002.1_100_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : Csa3_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=0.0043;Score=14.2;Coverage_Seq=0.6097560975609756;Coverage_Hmm=0.6016949152542372
SEQF3629.1|SWFJ01000002.1	CCTyper	CDS	107727	108317	197	-	.	ID=SEQF3629.1|SWFJ01000002.1_99_cas;Genome_ID=SEQF3629.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.6e-22;Score=76.4;Coverage_Seq=0.7868020304568528;Coverage_Hmm=0.99375