SEQF3643.1|WIJW01000021.1	CCTyper	repeat_region	10778	11182	405	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1;Genome_ID=SEQF3643.1;Note=Predictor:CCtyper;Start:10778;End:11182;Consensus_Repeat:AGTATAAGAACCTATCTACCTCGGTAGGGGCCGGAAAC;Number_of_Repeats:6;Repeat_Length:33.5;Average_Spacer_Length:40.8;Repeat_Identity:72.7;Spacer_Identity:44.4;Spacer_Length_Sem:4.0;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.766;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	10778	10814	37	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_REPEAT1;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=GTATAAGAACCTATCTGCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	10815	10852	38	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_SPACER1;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=TCCGCTGGTTTTTCAGCTTTTGGTTCCACTGGTTTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	10853	10888	36	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_REPEAT2;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=GTATAAGAACCTATCTGCCTCGAGAGGGGACGGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	10889	10941	53	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_SPACER2;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=GTCAATTCCTGCTTATTCATCTTCCAACTCCTCAACTCAGTAGAACACCCTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	10942	10964	23	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_REPEAT3;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=TCACCTCGGTAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	10965	11011	47	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_SPACER3;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=TCATATACTCTTCCTGATATGCTTTATTCGATAATACCAGTAAGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	11012	11040	29	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_REPEAT4;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=ACCTATCTACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	11041	11074	34	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_SPACER4;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=CGGTTTTTTCTCTAGGTTTATTAATAAATCCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	11075	11112	38	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_REPEAT5;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=AGTATAAGAACCTATCTACCTCGGTAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	11113	11144	32	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_SPACER5;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=GTCGTAATTTTTTCCATTGTCTTAGTTTGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	11145	11182	38	+	.	ID=SEQF3643.1|WIJW01000021.1-1_1_REPEAT6;Parent=SEQF3643.1|WIJW01000021.1-1_1;Note=AGTATAAGAACCTATCTACCTCGCGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	repeat_region	12034	12205	172	+	.	ID=SEQF3643.1|WIJW01000021.1-1_3;Genome_ID=SEQF3643.1;Note=Predictor:CCtyper;Start:12034;End:12205;Consensus_Repeat:CCTATCTACCTCGCGAGGGGACAGTTT;Number_of_Repeats:3;Repeat_Length:28.3;Average_Spacer_Length:43.5;Repeat_Identity:68.8;Spacer_Identity:40.3;Spacer_Length_Sem:1.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.837;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	12034	12062	29	+	.	ID=SEQF3643.1|WIJW01000021.1-1_3_REPEAT1;Parent=SEQF3643.1|WIJW01000021.1-1_3;Note=ACCTATCTACCTCGCGAGGGGCCAGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	12063	12104	42	+	.	ID=SEQF3643.1|WIJW01000021.1-1_3_SPACER1;Parent=SEQF3643.1|WIJW01000021.1-1_3;Note=CATGTTTTTTCCTCCTTAGAAATTATTTATAATTGTATATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	12105	12133	29	+	.	ID=SEQF3643.1|WIJW01000021.1-1_3_REPEAT2;Parent=SEQF3643.1|WIJW01000021.1-1_3;Note=ACCTATCAACCTCGAGAGGGGCCGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	binding_site	12134	12178	45	+	.	ID=SEQF3643.1|WIJW01000021.1-1_3_SPACER2;Parent=SEQF3643.1|WIJW01000021.1-1_3;Note=ACGCTACGCATAGGAATACGGAACGGAATCAAGTCAGTATAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	direct_repeat	12179	12205	27	+	.	ID=SEQF3643.1|WIJW01000021.1-1_3_REPEAT3;Parent=SEQF3643.1|WIJW01000021.1-1_3;Note=CCTATCTACCTCGCGAGGGGACAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3643.1|WIJW01000021.1	CCTyper	OPERON	5435	20762	15328	+	.	ID=SEQF3643.1|WIJW01000021.1@1;Genome_ID=SEQF3643.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=19.0;Genes=AbiEii_0_CAS-III,Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_1_CAS-III-A-III-D,Csm6_1_CAS-III,Csm6_1_CAS-III;Positions=6,10,11,12,13,14,15,16,17,18,19;E-values=5.40e-05,6.30e-81,2.40e-18,1.90e-27,8.10e-166,1.10e-23,3.60e-72,3.70e-42,1.60e-30,8.50e-71,5.20e-87;CoverageSeq=0.316,0.946,0.627,0.791,0.81,0.914,0.919,0.987,0.778,0.832,0.858;CoverageHMM=0.415,0.994,0.861,0.912,1.0,0.982,0.981,0.984,0.745,0.9,0.983;Strand_Interference=1;Strand_Adaptation=NA
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	5435	6592	386	+	.	ID=SEQF3643.1|WIJW01000021.1_6_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=5.4e-05;Score=19.7;Coverage_Seq=0.3160621761658031;Coverage_Hmm=0.4154929577464789
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	12980	15274	765	+	.	ID=SEQF3643.1|WIJW01000021.1_13_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=8.099999999999999e-166;Score=550.1;Coverage_Seq=0.8104575163398693;Coverage_Hmm=1.0
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	9349	10356	336	+	.	ID=SEQF3643.1|WIJW01000021.1_10_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.3e-81;Score=268.7;Coverage_Seq=0.9464285714285714;Coverage_Hmm=0.9936908517350158
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	10356	10685	110	+	.	ID=SEQF3643.1|WIJW01000021.1_11_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.4e-18;Score=63.0;Coverage_Seq=0.6272727272727273;Coverage_Hmm=0.8607594936708861
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	12268	12999	244	+	.	ID=SEQF3643.1|WIJW01000021.1_12_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.9e-27;Score=93.8;Coverage_Seq=0.7909836065573771;Coverage_Hmm=0.9123711340206185
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	15275	15658	128	+	.	ID=SEQF3643.1|WIJW01000021.1_14_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.1e-23;Score=81.2;Coverage_Seq=0.9140625;Coverage_Hmm=0.9818181818181818
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	15655	16317	221	+	.	ID=SEQF3643.1|WIJW01000021.1_15_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=3.6e-72;Score=239.5;Coverage_Seq=0.918552036199095;Coverage_Hmm=0.9813953488372092
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	16319	17224	302	+	.	ID=SEQF3643.1|WIJW01000021.1_16_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=3.7e-42;Score=141.5;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	17221	18303	361	+	.	ID=SEQF3643.1|WIJW01000021.1_17_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.6e-30;Score=103.9;Coverage_Seq=0.778393351800554;Coverage_Hmm=0.7452574525745257
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	18300	19460	387	+	.	ID=SEQF3643.1|WIJW01000021.1_18_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=8.5e-71;Score=235.6;Coverage_Seq=0.8320413436692506;Coverage_Hmm=0.9
SEQF3643.1|WIJW01000021.1	CCTyper	CDS	19473	20762	430	+	.	ID=SEQF3643.1|WIJW01000021.1_19_cas;Genome_ID=SEQF3643.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=5.2e-87;Score=288.9;Coverage_Seq=0.858139534883721;Coverage_Hmm=0.9833333333333333