SEQF3659.1|WIJM01000021.1	CCTyper	repeat_region	29609	29780	172	+	.	ID=SEQF3659.1|WIJM01000021.1-1_1;Genome_ID=SEQF3659.1;Note=Predictor:CCtyper;Start:29609;End:29780;Consensus_Repeat:GTTTCTGGCCCCTCGCGAGGTAGATAGGT;Number_of_Repeats:3;Repeat_Length:28.3;Average_Spacer_Length:43.5;Repeat_Identity:68.8;Spacer_Identity:40.3;Spacer_Length_Sem:1.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.963;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	29609	29635	27	+	.	ID=SEQF3659.1|WIJM01000021.1-1_1_REPEAT1;Parent=SEQF3659.1|WIJM01000021.1-1_1;Note=AAACTGTCCCCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	29636	29680	45	+	.	ID=SEQF3659.1|WIJM01000021.1-1_1_SPACER1;Parent=SEQF3659.1|WIJM01000021.1-1_1;Note=GATCTATACTGACTTGATTCCGTTCCGTATTCCTATGCGTAGCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	29681	29709	29	+	.	ID=SEQF3659.1|WIJM01000021.1-1_1_REPEAT2;Parent=SEQF3659.1|WIJM01000021.1-1_1;Note=GTTTCCGGCCCCTCTCGAGGTTGATAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	29710	29751	42	+	.	ID=SEQF3659.1|WIJM01000021.1-1_1_SPACER2;Parent=SEQF3659.1|WIJM01000021.1-1_1;Note=GGATATACAATTATAAATAATTTCTAAGGAGGAAAAAACATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	29752	29780	29	+	.	ID=SEQF3659.1|WIJM01000021.1-1_1_REPEAT3;Parent=SEQF3659.1|WIJM01000021.1-1_1;Note=GTTTCTGGCCCCTCGCGAGGTAGATAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	repeat_region	30632	31036	405	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3;Genome_ID=SEQF3659.1;Note=Predictor:CCtyper;Start:30632;End:31036;Consensus_Repeat:TTTCCGTCCCCTCTCGAGGCAGATAGGTTCTTATAC;Number_of_Repeats:6;Repeat_Length:33.5;Average_Spacer_Length:40.8;Repeat_Identity:72.7;Spacer_Identity:44.4;Spacer_Length_Sem:4.0;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.99;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	30632	30669	38	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_REPEAT1;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTTCTTATACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	30670	30701	32	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_SPACER1;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GTTCAAACTAAGACAATGGAAAAAATTACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	30702	30739	38	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_REPEAT2;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GTTTCCGGCCCCTACCGAGGTAGATAGGTTCTTATACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	30740	30773	34	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_SPACER2;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=ATTGGATTTATTAATAAACCTAGAGAAAAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	30774	30802	29	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_REPEAT3;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	30803	30849	47	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_SPACER3;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=TGTCTTACTGGTATTATCGAATAAAGCATATCAGGAAGAGTATATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	30850	30872	23	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_REPEAT4;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GTTTCCGGCCCCTACCGAGGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	30873	30925	53	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_SPACER4;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=ATAGGGTGTTCTACTGAGTTGAGGAGTTGGAAGATGAATAAGCAGGAATTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	30926	30961	36	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_REPEAT5;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=TTTCCGTCCCCTCTCGAGGCAGATAGGTTCTTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	binding_site	30962	30999	38	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_SPACER5;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GAAAAACCAGTGGAACCAAAAGCTGAAAAACCAGCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	direct_repeat	31000	31036	37	+	.	ID=SEQF3659.1|WIJM01000021.1-1_3_REPEAT6;Parent=SEQF3659.1|WIJM01000021.1-1_3;Note=GTTTCCGTCCCCTCTCGAGGCAGATAGGTTCTTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3659.1|WIJM01000021.1	CCTyper	OPERON	21052	36379	15328	-	.	ID=SEQF3659.1|WIJM01000021.1@2;Genome_ID=SEQF3659.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=19.0;Genes=Csm6_1_CAS-III,Csm6_1_CAS-III,Csm5gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI,AbiEii_0_CAS-III;Positions=18,19,20,21,22,23,24,25,26,27,31;E-values=5.20e-87,8.50e-71,1.60e-30,3.80e-42,3.60e-72,1.10e-23,8.10e-166,1.90e-27,2.40e-18,5.70e-81,5.50e-05;CoverageSeq=0.858,0.832,0.778,0.987,0.919,0.914,0.81,0.791,0.627,0.946,0.316;CoverageHMM=0.983,0.9,0.745,0.984,0.981,0.982,1.0,0.912,0.861,0.994,0.415;Strand_Interference=-1;Strand_Adaptation=NA
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	35222	36379	386	-	.	ID=SEQF3659.1|WIJM01000021.1_31_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=5.5e-05;Score=19.7;Coverage_Seq=0.3160621761658031;Coverage_Hmm=0.4154929577464789
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	26540	28834	765	-	.	ID=SEQF3659.1|WIJM01000021.1_24_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=8.099999999999999e-166;Score=550.1;Coverage_Seq=0.8104575163398693;Coverage_Hmm=1.0
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	31458	32465	336	-	.	ID=SEQF3659.1|WIJM01000021.1_27_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.7e-81;Score=268.9;Coverage_Seq=0.9464285714285714;Coverage_Hmm=0.9936908517350158
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	31129	31458	110	-	.	ID=SEQF3659.1|WIJM01000021.1_26_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.4e-18;Score=63.0;Coverage_Seq=0.6272727272727273;Coverage_Hmm=0.8607594936708861
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	28815	29546	244	-	.	ID=SEQF3659.1|WIJM01000021.1_25_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.9e-27;Score=93.8;Coverage_Seq=0.7909836065573771;Coverage_Hmm=0.9123711340206185
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	26156	26539	128	-	.	ID=SEQF3659.1|WIJM01000021.1_23_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=1.1e-23;Score=81.2;Coverage_Seq=0.9140625;Coverage_Hmm=0.9818181818181818
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	25497	26159	221	-	.	ID=SEQF3659.1|WIJM01000021.1_22_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.6e-72;Score=239.5;Coverage_Seq=0.918552036199095;Coverage_Hmm=0.9813953488372092
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	24590	25495	302	-	.	ID=SEQF3659.1|WIJM01000021.1_21_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=3.8e-42;Score=141.5;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	23511	24593	361	-	.	ID=SEQF3659.1|WIJM01000021.1_20_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=1.6e-30;Score=103.9;Coverage_Seq=0.778393351800554;Coverage_Hmm=0.7452574525745257
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	21052	22341	430	-	.	ID=SEQF3659.1|WIJM01000021.1_18_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=5.2e-87;Score=288.9;Coverage_Seq=0.858139534883721;Coverage_Hmm=0.9833333333333333
SEQF3659.1|WIJM01000021.1	CCTyper	CDS	22354	23514	387	-	.	ID=SEQF3659.1|WIJM01000021.1_19_cas;Genome_ID=SEQF3659.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=8.5e-71;Score=235.6;Coverage_Seq=0.8320413436692506;Coverage_Hmm=0.9