SEQF3673.1|AP023349.1	CCTyper	repeat_region	786912	787747	836	+	.	ID=SEQF3673.1|AP023349.1_1;Genome_ID=SEQF3673.1;Note=Predictor:CCtyper;Start:786912;End:787747;Consensus_Repeat:ATTCACCTCGGTAGGGGACGGAAAC;Number_of_Repeats:12;Repeat_Length:25;Average_Spacer_Length:48.7;Repeat_Identity:78.8;Spacer_Identity:47.7;Spacer_Length_Sem:0.7;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.939;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	786912	786936	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT1;Parent=SEQF3673.1|AP023349.1_1;Note=ATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	786937	786984	48	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER1;Parent=SEQF3673.1|AP023349.1_1;Note=TGATTTTGACCTTGACCTTGGTTTTGACCTTGACCCGTATAAGAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	786985	787009	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT2;Parent=SEQF3673.1|AP023349.1_1;Note=ATCTGCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787010	787057	48	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER2;Parent=SEQF3673.1|AP023349.1_1;Note=CTTCCTCGATTTGGTTTGAAACGTTTTCCATTGACAGTATAAGAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787058	787082	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT3;Parent=SEQF3673.1|AP023349.1_1;Note=ATCTACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787083	787131	49	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER3;Parent=SEQF3673.1|AP023349.1_1;Note=ACCTCATCCCCAACTCTTACCTTTTCTTACTGCTCCTGTAAAACCACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787132	787156	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT4;Parent=SEQF3673.1|AP023349.1_1;Note=ATTCACCTCAGTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787157	787209	53	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER4;Parent=SEQF3673.1|AP023349.1_1;Note=TTAACTGGTTCTGCCGGTTTAGCAGGTTCAACAGGTTTTGTGTAGAACATCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787210	787234	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT5;Parent=SEQF3673.1|AP023349.1_1;Note=ATTCACCTCGGTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787235	787282	48	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER5;Parent=SEQF3673.1|AP023349.1_1;Note=GAATCTGAATAAGGATGATCAGTGATTAAACAATCAGTAGAACAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787283	787307	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT6;Parent=SEQF3673.1|AP023349.1_1;Note=ATCCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787308	787359	52	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER6;Parent=SEQF3673.1|AP023349.1_1;Note=TTTTATACCTTTCCTAAATTGTAATGAAAGAGCAGGTCTGGTAGAACACCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787360	787384	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT7;Parent=SEQF3673.1|AP023349.1_1;Note=ATTCACCTCGGTAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787385	787428	44	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER7;Parent=SEQF3673.1|AP023349.1_1;Note=CCTTTCTCGACGACCTTACCGAATATCTCAGCGTAGAACACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787429	787453	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT8;Parent=SEQF3673.1|AP023349.1_1;Note=ATTCACCTTGAGAGAGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787454	787501	48	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER8;Parent=SEQF3673.1|AP023349.1_1;Note=AAACTTCATATAATTCCATGCTTAAATCCTTCTTTCGTAGAACACCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787502	787526	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT9;Parent=SEQF3673.1|AP023349.1_1;Note=ATTCACCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787527	787575	49	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER9;Parent=SEQF3673.1|AP023349.1_1;Note=AATTCAGGTTTCGCATACCAACTTACATCTAAACCATAAAGAACACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787576	787600	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT10;Parent=SEQF3673.1|AP023349.1_1;Note=ACGCACCTCGGTAGAGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787601	787649	49	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER10;Parent=SEQF3673.1|AP023349.1_1;Note=TTTCCTAAATTGTAGTACATGAGCAAGTCAGGGATTTGTAGAACACCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787650	787674	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT11;Parent=SEQF3673.1|AP023349.1_1;Note=GTTCACCTTGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	binding_site	787675	787722	48	+	.	ID=SEQF3673.1|AP023349.1_1_SPACER11;Parent=SEQF3673.1|AP023349.1_1;Note=GAGTTACAAGACCCATCAAAAGCCCAATCATCTTGCGTAGAACAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	direct_repeat	787723	787747	25	+	.	ID=SEQF3673.1|AP023349.1_1_REPEAT12;Parent=SEQF3673.1|AP023349.1_1;Note=ATTCACCTCGGTAGAGGACGGGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF3673.1|AP023349.1	CCTyper	OPERON	786476	796475	10000	+	.	ID=SEQF3673.1|AP023349.1@25;Genome_ID=SEQF3673.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=17.0;Genes=Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_1_CAS-III,Csm6_1_CAS-III,Csm6_1_CAS-III;Positions=796,797,798,800,801,802,803,804,805,806;E-values=1.10e-19,1.80e-28,5.60e-140,4.20e-23,2.90e-73,1.80e-42,9.70e-31,4.90e-56,4.90e-08,5.90e-87;CoverageSeq=0.616,0.783,0.926,0.921,0.9,0.987,0.806,0.792,0.923,0.858;CoverageHMM=0.861,0.912,0.878,0.982,0.963,0.984,0.789,0.558,0.303,0.983;Strand_Interference=1;Strand_Adaptation=NA
SEQF3673.1|AP023349.1	CCTyper	CDS	788748	790535	596	+	.	ID=SEQF3673.1|AP023349.1_798_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=5.5999999999999995e-140;Score=464.8;Coverage_Seq=0.9261744966442953;Coverage_Hmm=0.8776758409785933
SEQF3673.1|AP023349.1	CCTyper	CDS	786476	786811	112	+	.	ID=SEQF3673.1|AP023349.1_796_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.1e-19;Score=67.3;Coverage_Seq=0.6160714285714286;Coverage_Hmm=0.8607594936708861
SEQF3673.1|AP023349.1	CCTyper	CDS	788036	788767	244	+	.	ID=SEQF3673.1|AP023349.1_797_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.8000000000000002e-28;Score=97.1;Coverage_Seq=0.7827868852459017;Coverage_Hmm=0.9123711340206185
SEQF3673.1|AP023349.1	CCTyper	CDS	790991	791371	127	+	.	ID=SEQF3673.1|AP023349.1_800_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=4.2e-23;Score=79.4;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF3673.1|AP023349.1	CCTyper	CDS	791371	792033	221	+	.	ID=SEQF3673.1|AP023349.1_801_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=2.9e-73;Score=243.1;Coverage_Seq=0.9004524886877828;Coverage_Hmm=0.9627906976744186
SEQF3673.1|AP023349.1	CCTyper	CDS	792035	792940	302	+	.	ID=SEQF3673.1|AP023349.1_802_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=1.8e-42;Score=142.6;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF3673.1|AP023349.1	CCTyper	CDS	792937	794016	360	+	.	ID=SEQF3673.1|AP023349.1_803_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=9.7e-31;Score=104.2;Coverage_Seq=0.8055555555555556;Coverage_Hmm=0.7890410958904109
SEQF3673.1|AP023349.1	CCTyper	CDS	794013	794777	255	+	.	ID=SEQF3673.1|AP023349.1_804_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=4.9e-56;Score=187.0;Coverage_Seq=0.792156862745098;Coverage_Hmm=0.5583333333333333
SEQF3673.1|AP023349.1	CCTyper	CDS	794823	795173	117	+	.	ID=SEQF3673.1|AP023349.1_805_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=4.9e-08;Score=29.1;Coverage_Seq=0.9230769230769231;Coverage_Hmm=0.30277777777777776
SEQF3673.1|AP023349.1	CCTyper	CDS	795186	796475	430	+	.	ID=SEQF3673.1|AP023349.1_806_cas;Genome_ID=SEQF3673.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=5.9000000000000005e-87;Score=288.8;Coverage_Seq=0.858139534883721;Coverage_Hmm=0.9833333333333333