SEQF4038.1|LR735429.1	CCTyper	repeat_region	69068	70157	1090	+	.	ID=SEQF4038.1|LR735429.1_1;Genome_ID=SEQF4038.1;Note=Predictor:CCtyper;Start:69068;End:70157;Consensus_Repeat:GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Number_of_Repeats:17;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:42.8;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.972;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69068	69103	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT1;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69104	69132	29	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER1;Parent=SEQF4038.1|LR735429.1_1;Note=CAAAAGTTTTTCCAAATGATGGGCACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69133	69168	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT2;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69169	69198	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER2;Parent=SEQF4038.1|LR735429.1_1;Note=ATTGATTCAGTTTGTAGCACTTTTCACTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69199	69234	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT3;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69235	69264	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER3;Parent=SEQF4038.1|LR735429.1_1;Note=TATTAAAGATTTGGTTTACTATCGCTATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69265	69300	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT4;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69301	69329	29	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER4;Parent=SEQF4038.1|LR735429.1_1;Note=ACTTATCGCTGCATGAACAGCACCCATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69330	69365	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT5;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69366	69395	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER5;Parent=SEQF4038.1|LR735429.1_1;Note=TTGGACTGGTTATCATGTTTAATCCATTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69396	69431	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT6;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69432	69461	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER6;Parent=SEQF4038.1|LR735429.1_1;Note=AAGGCGAAACAGATCATGACAAACTAGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69462	69497	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT7;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69498	69527	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER7;Parent=SEQF4038.1|LR735429.1_1;Note=CATCTTACCTTGCTATTATGACGGTAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69528	69563	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT8;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69564	69593	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER8;Parent=SEQF4038.1|LR735429.1_1;Note=TATCTTTTATGTTGGAACCAAATTCAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69594	69629	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT9;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69630	69659	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER9;Parent=SEQF4038.1|LR735429.1_1;Note=TTGTAAAAGCTAAAAATGAGGAAGAACTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69660	69695	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT10;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69696	69725	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER10;Parent=SEQF4038.1|LR735429.1_1;Note=CAACCGAAATAGAACAAGCTATAAAAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69726	69761	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT11;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69762	69791	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER11;Parent=SEQF4038.1|LR735429.1_1;Note=GAAAAATTCATTCACTCAATGGGAAATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69792	69827	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT12;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69828	69857	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER12;Parent=SEQF4038.1|LR735429.1_1;Note=GATAAGACGTTTACTCATAACAGAAACAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69858	69893	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT13;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69894	69923	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER13;Parent=SEQF4038.1|LR735429.1_1;Note=TCTTGCCTCTTTGAACAGACCAGAATACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69924	69959	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT14;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	69960	69989	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER14;Parent=SEQF4038.1|LR735429.1_1;Note=TGTTTATTCAGTTTTGTGATTTATATAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	69990	70025	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT15;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	70026	70055	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER15;Parent=SEQF4038.1|LR735429.1_1;Note=AAATCGCTCATGCGCATCACTACACAGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	70056	70091	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT16;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	binding_site	70092	70121	30	+	.	ID=SEQF4038.1|LR735429.1_1_SPACER16;Parent=SEQF4038.1|LR735429.1_1;Note=CTCGATTGAAGTTATAAAATAATTTAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	direct_repeat	70122	70157	36	+	.	ID=SEQF4038.1|LR735429.1_1_REPEAT17;Parent=SEQF4038.1|LR735429.1_1;Note=GTTTTAGTACTCTGTATTTTAGGTATAAGGTATACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4038.1|LR735429.1	CCTyper	OPERON	63643	69037	5395	+	.	ID=SEQF4038.1|LR735429.1@2;Genome_ID=SEQF4038.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=8.0;Genes=Cas9_0_II,Cas1_0_II,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_8_CAS-II-A;Positions=49,50,51,52;E-values=4.20e-139,2.10e-84,1.40e-36,1.00e-141;CoverageSeq=0.888,0.911,0.99,0.997;CoverageHMM=0.988,1.0,0.879,0.988;Strand_Interference=1;Strand_Adaptation=1
SEQF4038.1|LR735429.1	CCTyper	CDS	66812	67717	302	+	.	ID=SEQF4038.1|LR735429.1_50_cas;Genome_ID=SEQF4038.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_II;coding_strand=+;E-value=2.1e-84;Score=280.2;Coverage_Seq=0.9105960264900662;Coverage_Hmm=1.0
SEQF4038.1|LR735429.1	CCTyper	CDS	67729	68037	103	+	.	ID=SEQF4038.1|LR735429.1_51_cas;Genome_ID=SEQF4038.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.4e-36;Score=122.3;Coverage_Seq=0.9902912621359223;Coverage_Hmm=0.8793103448275862
SEQF4038.1|LR735429.1	CCTyper	CDS	63643	66804	1054	+	.	ID=SEQF4038.1|LR735429.1_49_cas;Genome_ID=SEQF4038.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=4.1999999999999994e-139;Score=462.4;Coverage_Seq=0.888045540796964;Coverage_Hmm=0.9879518072289156
SEQF4038.1|LR735429.1	CCTyper	CDS	68048	69037	330	+	.	ID=SEQF4038.1|LR735429.1_52_cas;Genome_ID=SEQF4038.1;Feature_type=CDS;Product=Cas Prediction : Csn2_8_CAS-II-A;coding_strand=+;E-value=1e-141;Score=468.9;Coverage_Seq=0.996969696969697;Coverage_Hmm=0.9880597014925373