SEQF4063.1|CP052975.1	CCTyper	repeat_region	78698	79020	323	+	.	ID=SEQF4063.1|CP052975.1_1;Genome_ID=SEQF4063.1;Note=Predictor:CCtyper;Start:78698;End:79020;Consensus_Repeat:GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:35.8;Repeat_Identity:93.8;Spacer_Identity:46.8;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.682;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	78698	78733	36	+	.	ID=SEQF4063.1|CP052975.1_1_REPEAT1;Parent=SEQF4063.1|CP052975.1_1;Note=GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	78734	78768	35	+	.	ID=SEQF4063.1|CP052975.1_1_SPACER1;Parent=SEQF4063.1|CP052975.1_1;Note=ACGAAAATGTTTTTAATAATCAAATTATTTCTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	78769	78804	36	+	.	ID=SEQF4063.1|CP052975.1_1_REPEAT2;Parent=SEQF4063.1|CP052975.1_1;Note=GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	78805	78840	36	+	.	ID=SEQF4063.1|CP052975.1_1_SPACER2;Parent=SEQF4063.1|CP052975.1_1;Note=TCCAGTTTCTTGTATTTCTTTGCTAAATAAACCACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	78841	78876	36	+	.	ID=SEQF4063.1|CP052975.1_1_REPEAT3;Parent=SEQF4063.1|CP052975.1_1;Note=GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	78877	78911	35	+	.	ID=SEQF4063.1|CP052975.1_1_SPACER3;Parent=SEQF4063.1|CP052975.1_1;Note=GATAAATATCTATAATTAACAATTTTCTTATTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	78912	78947	36	+	.	ID=SEQF4063.1|CP052975.1_1_REPEAT4;Parent=SEQF4063.1|CP052975.1_1;Note=GATCGATAACTATCCCGAAGAACAGGGGATGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	78948	78984	37	+	.	ID=SEQF4063.1|CP052975.1_1_SPACER4;Parent=SEQF4063.1|CP052975.1_1;Note=TCCAACTTACTATTTCCTTCTTGAAAAGTAAACTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	78985	79020	36	+	.	ID=SEQF4063.1|CP052975.1_1_REPEAT5;Parent=SEQF4063.1|CP052975.1_1;Note=ATTCGATAACTACCCCGGAGAACAGGGGATGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	repeat_region	116299	117050	752	+	.	ID=SEQF4063.1|CP052975.1_2;Genome_ID=SEQF4063.1;Note=Predictor:CCtyper;Start:116299;End:117050;Consensus_Repeat:GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Number_of_Repeats:11;Repeat_Length:36;Average_Spacer_Length:35.6;Repeat_Identity:94.3;Spacer_Identity:44.1;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116299	116334	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT1;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116335	116370	36	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER1;Parent=SEQF4063.1|CP052975.1_2;Note=TGTTTCTTGCTCTGTACTTTCATTCACACTTATTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116371	116406	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT2;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116407	116443	37	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER2;Parent=SEQF4063.1|CP052975.1_2;Note=CACTATTCTTGATTACTTGATTAGTATTCAAGATAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116444	116479	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT3;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116480	116515	36	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER3;Parent=SEQF4063.1|CP052975.1_2;Note=AATATAAGCGTAAAAAGTATTGTCTTTATATTGACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116516	116551	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT4;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116552	116588	37	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER4;Parent=SEQF4063.1|CP052975.1_2;Note=CTTTAAGGTAACTGAAATTGATAACACTCTTCCAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116589	116624	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT5;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116625	116658	34	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER5;Parent=SEQF4063.1|CP052975.1_2;Note=GGTGCCAACCTGTGCCCCCTAAATCATTTCTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116659	116694	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT6;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116695	116729	35	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER6;Parent=SEQF4063.1|CP052975.1_2;Note=CATTTCAATCATATCCTTTTTAATAATTTTTTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116730	116765	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT7;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116766	116802	37	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER7;Parent=SEQF4063.1|CP052975.1_2;Note=TGTTCGTCTATGCCGTCATAATGTAAATCACTTACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116803	116838	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT8;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116839	116872	34	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER8;Parent=SEQF4063.1|CP052975.1_2;Note=TTCAATAGCCCAATTAATAACATCTTTCTTCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116873	116908	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT9;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116909	116943	35	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER9;Parent=SEQF4063.1|CP052975.1_2;Note=TTAACTTCATTTTCACGACCTACTAATGGACCTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	116944	116979	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT10;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACCACCCCGAAGAAAAGGGGACGAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	binding_site	116980	117014	35	+	.	ID=SEQF4063.1|CP052975.1_2_SPACER10;Parent=SEQF4063.1|CP052975.1_2;Note=ACATCGTCAGCCATGTGGTTTGGTAAGTTTACAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	direct_repeat	117015	117050	36	+	.	ID=SEQF4063.1|CP052975.1_2_REPEAT11;Parent=SEQF4063.1|CP052975.1_2;Note=GATCGATAACTACCCCGAAGAAAAGGGGGCAGAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4063.1|CP052975.1	CCTyper	OPERON	117126	130545	13420	+	.	ID=SEQF4063.1|CP052975.1@2;Genome_ID=SEQF4063.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=23.0;Genes=Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_0_I-II-III,Cas10_0_IIIA,Csm2gr11_0_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_0_IIIA,Cas6_0_CAS-I-II-III-IV-V-VI,AbiEii_0_CAS-III;Positions=99,100,101,102,103,104,105,106,107,111;E-values=3.70e-97,6.60e-28,1.10e-215,1.20e-25,2.50e-83,4.30e-51,3.20e-29,7.80e-172,3.20e-27,1.70e-07;CoverageSeq=0.917,0.98,0.846,0.676,0.953,0.987,0.727,0.853,0.816,0.599;CoverageHMM=0.996,1.0,1.0,1.0,0.991,0.971,0.655,1.0,0.99,0.553;Strand_Interference=1;Strand_Adaptation=NA
SEQF4063.1|CP052975.1	CCTyper	CDS	129640	130545	302	+	.	ID=SEQF4063.1|CP052975.1_111_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=1.7e-07;Score=28.1;Coverage_Seq=0.5993377483443708;Coverage_Hmm=0.5528169014084507
SEQF4063.1|CP052975.1	CCTyper	CDS	118349	120622	758	+	.	ID=SEQF4063.1|CP052975.1_101_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Cas10_0_IIIA;coding_strand=+;E-value=1.1e-215;Score=715.2;Coverage_Seq=0.8456464379947229;Coverage_Hmm=1.0
SEQF4063.1|CP052975.1	CCTyper	CDS	117126	118031	302	+	.	ID=SEQF4063.1|CP052975.1_99_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.7e-97;Score=321.8;Coverage_Seq=0.9172185430463576;Coverage_Hmm=0.9963636363636363
SEQF4063.1|CP052975.1	CCTyper	CDS	118031	118336	102	+	.	ID=SEQF4063.1|CP052975.1_100_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Cas2_0_I-II-III;coding_strand=+;E-value=6.6e-28;Score=93.9;Coverage_Seq=0.9803921568627451;Coverage_Hmm=1.0
SEQF4063.1|CP052975.1	CCTyper	CDS	124905	125639	245	+	.	ID=SEQF4063.1|CP052975.1_107_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.2000000000000003e-27;Score=93.3;Coverage_Seq=0.8163265306122449;Coverage_Hmm=0.9896907216494846
SEQF4063.1|CP052975.1	CCTyper	CDS	120625	121050	142	+	.	ID=SEQF4063.1|CP052975.1_102_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_0_CAS-III-A;coding_strand=+;E-value=1.2e-25;Score=87.4;Coverage_Seq=0.676056338028169;Coverage_Hmm=1.0
SEQF4063.1|CP052975.1	CCTyper	CDS	121052	121696	215	+	.	ID=SEQF4063.1|CP052975.1_103_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=2.5e-83;Score=276.1;Coverage_Seq=0.9534883720930233;Coverage_Hmm=0.9906976744186047
SEQF4063.1|CP052975.1	CCTyper	CDS	121707	122615	303	+	.	ID=SEQF4063.1|CP052975.1_104_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=4.3e-51;Score=171.0;Coverage_Seq=0.9867986798679867;Coverage_Hmm=0.9714285714285714
SEQF4063.1|CP052975.1	CCTyper	CDS	122618	123640	341	+	.	ID=SEQF4063.1|CP052975.1_105_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=3.1999999999999997e-29;Score=99.3;Coverage_Seq=0.7272727272727273;Coverage_Hmm=0.6547945205479452
SEQF4063.1|CP052975.1	CCTyper	CDS	123640	124908	423	+	.	ID=SEQF4063.1|CP052975.1_106_cas;Genome_ID=SEQF4063.1;Feature_type=CDS;Product=Cas Prediction : Csm6_0_IIIA;coding_strand=+;E-value=7.8e-172;Score=568.2;Coverage_Seq=0.8534278959810875;Coverage_Hmm=1.0