SEQF4120.1|RQVH01000010.1	CCTyper	repeat_region	74212	74436	225	+	.	ID=SEQF4120.1|RQVH01000010.1_1;Genome_ID=SEQF4120.1;Note=Predictor:CCtyper;Start:74212;End:74436;Consensus_Repeat:ATTTACAGAATCACACTACTCTCAAAC;Number_of_Repeats:4;Repeat_Length:27;Average_Spacer_Length:39.0;Repeat_Identity:92.9;Spacer_Identity:51.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.701;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	direct_repeat	74212	74238	27	+	.	ID=SEQF4120.1|RQVH01000010.1_1_REPEAT1;Parent=SEQF4120.1|RQVH01000010.1_1;Note=ATTTACGGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	binding_site	74239	74277	39	+	.	ID=SEQF4120.1|RQVH01000010.1_1_SPACER1;Parent=SEQF4120.1|RQVH01000010.1_1;Note=GCTCCATTTTTTAACATCATCATTAGAGATGTTTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	direct_repeat	74278	74304	27	+	.	ID=SEQF4120.1|RQVH01000010.1_1_REPEAT2;Parent=SEQF4120.1|RQVH01000010.1_1;Note=ATTTACAAAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	binding_site	74305	74343	39	+	.	ID=SEQF4120.1|RQVH01000010.1_1_SPACER2;Parent=SEQF4120.1|RQVH01000010.1_1;Note=TATCTGAAGTTCAATCTCTTTAGTGCGTTGGTTTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	direct_repeat	74344	74370	27	+	.	ID=SEQF4120.1|RQVH01000010.1_1_REPEAT3;Parent=SEQF4120.1|RQVH01000010.1_1;Note=ATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	binding_site	74371	74409	39	+	.	ID=SEQF4120.1|RQVH01000010.1_1_SPACER3;Parent=SEQF4120.1|RQVH01000010.1_1;Note=TTGTACTCTGCCAAAAGATCTTGTGTTTTCGTTTGAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000010.1	CCTyper	direct_repeat	74410	74436	27	+	.	ID=SEQF4120.1|RQVH01000010.1_1_REPEAT4;Parent=SEQF4120.1|RQVH01000010.1_1;Note=ATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	repeat_region	53879	54141	263	+	.	ID=SEQF4120.1|RQVH01000011.1_2;Genome_ID=SEQF4120.1;Note=Predictor:CCtyper;Start:53879;End:54141;Consensus_Repeat:GATAAAAAATAATCCCCAGTACGGGGACGGAAAC;Number_of_Repeats:4;Repeat_Length:34;Average_Spacer_Length:42.3;Repeat_Identity:85.0;Spacer_Identity:40.7;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.992;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	direct_repeat	53879	53912	34	+	.	ID=SEQF4120.1|RQVH01000011.1_2_REPEAT1;Parent=SEQF4120.1|RQVH01000011.1_2;Note=GATAAAAAATAATCCCCAGTACGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	binding_site	53913	53954	42	+	.	ID=SEQF4120.1|RQVH01000011.1_2_SPACER1;Parent=SEQF4120.1|RQVH01000011.1_2;Note=TCATGCACAAAATCTATTCCCATGTGTATCATTGCGTCTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	direct_repeat	53955	53988	34	+	.	ID=SEQF4120.1|RQVH01000011.1_2_REPEAT2;Parent=SEQF4120.1|RQVH01000011.1_2;Note=GATAAAAAATAATCCCCAGTACGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	binding_site	53989	54030	42	+	.	ID=SEQF4120.1|RQVH01000011.1_2_SPACER2;Parent=SEQF4120.1|RQVH01000011.1_2;Note=AAATATAAACCTCCAATATAATGTCCAATGTTAACTTTTTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	direct_repeat	54031	54064	34	+	.	ID=SEQF4120.1|RQVH01000011.1_2_REPEAT3;Parent=SEQF4120.1|RQVH01000011.1_2;Note=GATAAAAAATAATCCCCAGTACGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	binding_site	54065	54107	43	+	.	ID=SEQF4120.1|RQVH01000011.1_2_SPACER3;Parent=SEQF4120.1|RQVH01000011.1_2;Note=TACTTGATGGGGTTGTTTTGTTAATCTCATTAAAAAATATCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000011.1	CCTyper	direct_repeat	54108	54141	34	+	.	ID=SEQF4120.1|RQVH01000011.1_2_REPEAT4;Parent=SEQF4120.1|RQVH01000011.1_2;Note=TAAAAAAAATAAACCACAGTACTGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000034.1	CCTyper	repeat_region	74	247	174	+	.	ID=SEQF4120.1|RQVH01000034.1_3;Genome_ID=SEQF4120.1;Note=Predictor:CCtyper;Start:74;End:247;Consensus_Repeat:GTTTCAGTCCCCTCAATGGGGAAGTAATTCTAAAG;Number_of_Repeats:3;Repeat_Length:35;Average_Spacer_Length:34.5;Repeat_Identity:100.0;Spacer_Identity:35.3;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.499;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000034.1	CCTyper	direct_repeat	74	108	35	+	.	ID=SEQF4120.1|RQVH01000034.1_3_REPEAT1;Parent=SEQF4120.1|RQVH01000034.1_3;Note=GTTTCAGTCCCCTCAATGGGGAAGTAATTCTAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000034.1	CCTyper	binding_site	109	142	34	+	.	ID=SEQF4120.1|RQVH01000034.1_3_SPACER1;Parent=SEQF4120.1|RQVH01000034.1_3;Note=GGCTACGATTTAATCAAGAAAATTAAATAATGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000034.1	CCTyper	direct_repeat	143	177	35	+	.	ID=SEQF4120.1|RQVH01000034.1_3_REPEAT2;Parent=SEQF4120.1|RQVH01000034.1_3;Note=GTTTCAGTCCCCTCAATGGGGAAGTAATTCTAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000034.1	CCTyper	binding_site	178	212	35	+	.	ID=SEQF4120.1|RQVH01000034.1_3_SPACER2;Parent=SEQF4120.1|RQVH01000034.1_3;Note=CCGCCCCAATAACTTTCGCCGTTGCCAATTGGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000034.1	CCTyper	direct_repeat	213	247	35	+	.	ID=SEQF4120.1|RQVH01000034.1_3_REPEAT3;Parent=SEQF4120.1|RQVH01000034.1_3;Note=GTTTCAGTCCCCTCAATGGGGAAGTAATTCTAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	repeat_region	94	335	242	+	.	ID=SEQF4120.1|RQVH01000047.1_4;Genome_ID=SEQF4120.1;Note=Predictor:CCtyper;Start:94;End:335;Consensus_Repeat:CTTTAGAATTACTTCCCCATTGAGGGGACTGAAAC;Number_of_Repeats:4;Repeat_Length:35;Average_Spacer_Length:34.0;Repeat_Identity:100.0;Spacer_Identity:42.7;Spacer_Length_Sem:1.2;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.499;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	direct_repeat	94	128	35	+	.	ID=SEQF4120.1|RQVH01000047.1_4_REPEAT1;Parent=SEQF4120.1|RQVH01000047.1_4;Note=CTTTAGAATTACTTCCCCATTGAGGGGACTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	binding_site	129	164	36	+	.	ID=SEQF4120.1|RQVH01000047.1_4_SPACER1;Parent=SEQF4120.1|RQVH01000047.1_4;Note=TTAAAATAGGAACTGAAATTAACAAGTTTGCGTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	direct_repeat	165	199	35	+	.	ID=SEQF4120.1|RQVH01000047.1_4_REPEAT2;Parent=SEQF4120.1|RQVH01000047.1_4;Note=CTTTAGAATTACTTCCCCATTGAGGGGACTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	binding_site	200	231	32	+	.	ID=SEQF4120.1|RQVH01000047.1_4_SPACER2;Parent=SEQF4120.1|RQVH01000047.1_4;Note=GTCTTATTTTCAAGACCTAAATATTTGATTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	direct_repeat	232	266	35	+	.	ID=SEQF4120.1|RQVH01000047.1_4_REPEAT3;Parent=SEQF4120.1|RQVH01000047.1_4;Note=CTTTAGAATTACTTCCCCATTGAGGGGACTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	binding_site	267	300	34	+	.	ID=SEQF4120.1|RQVH01000047.1_4_SPACER3;Parent=SEQF4120.1|RQVH01000047.1_4;Note=AAGTCGTCTTCAATCTCGACAGATTGAACCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000047.1	CCTyper	direct_repeat	301	335	35	+	.	ID=SEQF4120.1|RQVH01000047.1_4_REPEAT4;Parent=SEQF4120.1|RQVH01000047.1_4;Note=CTTTAGAATTACTTCCCCATTGAGGGGACTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	repeat_region	274	451	178	+	.	ID=SEQF4120.1|RQVH01000016.1-1_5;Genome_ID=SEQF4120.1;Note=Predictor:CCtyper;Start:274;End:451;Consensus_Repeat:CTTTAGAATTACTTCCTCATTGAGGGGACTGAAA;Number_of_Repeats:3;Repeat_Length:33;Average_Spacer_Length:39.5;Repeat_Identity:85.1;Spacer_Identity:46.3;Spacer_Length_Sem:4.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.345;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	direct_repeat	274	307	34	+	.	ID=SEQF4120.1|RQVH01000016.1-1_5_REPEAT1;Parent=SEQF4120.1|RQVH01000016.1-1_5;Note=CTTTAGAATTACTTCCCCATTGTGGGGACTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	binding_site	308	342	35	+	.	ID=SEQF4120.1|RQVH01000016.1-1_5_SPACER1;Parent=SEQF4120.1|RQVH01000016.1-1_5;Note=TCTTTCTACGGAGTAGTTTCTTTCATCTACTTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	direct_repeat	343	376	34	+	.	ID=SEQF4120.1|RQVH01000016.1-1_5_REPEAT2;Parent=SEQF4120.1|RQVH01000016.1-1_5;Note=CTTTAGAATTACTTCCTCATTGAGGGGACTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	binding_site	377	420	44	+	.	ID=SEQF4120.1|RQVH01000016.1-1_5_SPACER2;Parent=SEQF4120.1|RQVH01000016.1-1_5;Note=CGTGATATAGCTAAGGTATGCATACGATTGACTATGTGCAAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	direct_repeat	421	451	31	+	.	ID=SEQF4120.1|RQVH01000016.1-1_5_REPEAT3;Parent=SEQF4120.1|RQVH01000016.1-1_5;Note=CTTTAGAATTACTTCCCCATTGCGGGGACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4120.1|RQVH01000016.1	CCTyper	OPERON	4580	13761	9182	-	.	ID=SEQF4120.1|RQVH01000016.1@1;Genome_ID=SEQF4120.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-D;Complete_Interference=67%;Complete_Adaptation=NA;Best_type=III-D;Best_score=12.0;Genes=Cas2_2_CAS-I-II-III-IV-V-VI,Csm3gr7_4_CAS-III-A-III-D,Csx19_1_CAS-III-D,Csm3gr7_2_CAS-III-A-III-D,Csx10gr5_1_CAS-III-D,Csm3gr7_11_CAS-III-A-III-D,Cas10_7_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI;Positions=5,6,7,8,10,11,12,13;E-values=1.60e-18,1.70e-89,2.50e-29,7.40e-15,1.30e-22,1.40e-31,4.60e-98,4.20e-17;CoverageSeq=0.761,0.921,0.74,0.562,0.545,0.949,0.78,0.723;CoverageHMM=0.886,0.909,0.79,0.894,0.774,0.912,0.99,0.871;Strand_Interference=-1;Strand_Adaptation=NA
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	11156	12856	567	-	.	ID=SEQF4120.1|RQVH01000016.1_12_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Cas10_7_CAS-III;coding_strand=-;E-value=4.6e-98;Score=325.4;Coverage_Seq=0.7795414462081128;Coverage_Hmm=0.9902439024390244
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	4580	4855	92	-	.	ID=SEQF4120.1|RQVH01000016.1_5_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.6e-18;Score=63.3;Coverage_Seq=0.7608695652173914;Coverage_Hmm=0.8860759493670886
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	12982	13761	260	+	.	ID=SEQF4120.1|RQVH01000016.1_13_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=4.2e-17;Score=59.7;Coverage_Seq=0.7230769230769231;Coverage_Hmm=0.8711340206185567
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	10496	11137	214	-	.	ID=SEQF4120.1|RQVH01000016.1_11_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_11_CAS-III-A-III-D;coding_strand=-;E-value=1.4e-31;Score=106.1;Coverage_Seq=0.9485981308411215;Coverage_Hmm=0.9120370370370371
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	7445	8560	372	-	.	ID=SEQF4120.1|RQVH01000016.1_8_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_2_CAS-III-A-III-D;coding_strand=-;E-value=7.4e-15;Score=52.4;Coverage_Seq=0.5618279569892473;Coverage_Hmm=0.8944444444444445
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	4988	6841	618	-	.	ID=SEQF4120.1|RQVH01000016.1_6_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_4_CAS-III-A-III-D;coding_strand=-;E-value=1.7e-89;Score=298.0;Coverage_Seq=0.9207119741100324;Coverage_Hmm=0.909375
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	8923	10479	519	-	.	ID=SEQF4120.1|RQVH01000016.1_10_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Csx10gr5_1_CAS-III-D;coding_strand=-;E-value=1.3e-22;Score=77.1;Coverage_Seq=0.5452793834296724;Coverage_Hmm=0.7735368956743003
SEQF4120.1|RQVH01000016.1	CCTyper	CDS	6846	7433	196	-	.	ID=SEQF4120.1|RQVH01000016.1_7_cas;Genome_ID=SEQF4120.1;Feature_type=CDS;Product=Cas Prediction : Csx19_1_CAS-III-D;coding_strand=-;E-value=2.5e-29;Score=98.6;Coverage_Seq=0.7397959183673469;Coverage_Hmm=0.79