SEQF4127.1|KQ960768.1	CCTyper	repeat_region	82017	82377	361	+	.	ID=SEQF4127.1|KQ960768.1_1;Genome_ID=SEQF4127.1;Note=Predictor:CCtyper;Start:82017;End:82377;Consensus_Repeat:AGACATTTACAGAATCACACTACTCTCAAAC;Number_of_Repeats:6;Repeat_Length:31;Average_Spacer_Length:35;Repeat_Identity:80.3;Spacer_Identity:44.8;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.291;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82017	82047	31	+	.	ID=SEQF4127.1|KQ960768.1_1_REPEAT1;Parent=SEQF4127.1|KQ960768.1_1;Note=NNNCATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82048	82082	35	+	.	ID=SEQF4127.1|KQ960768.1_1_SPACER1;Parent=SEQF4127.1|KQ960768.1_1;Note=CCATCCTCAATATCAGGTTGTTGCCTAATCGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82083	82113	31	+	.	ID=SEQF4127.1|KQ960768.1_1_REPEAT2;Parent=SEQF4127.1|KQ960768.1_1;Note=AGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82114	82148	35	+	.	ID=SEQF4127.1|KQ960768.1_1_SPACER2;Parent=SEQF4127.1|KQ960768.1_1;Note=TACTAGGAAAGCCTATCAACCGCTGATATAGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82149	82179	31	+	.	ID=SEQF4127.1|KQ960768.1_1_REPEAT3;Parent=SEQF4127.1|KQ960768.1_1;Note=AGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82180	82214	35	+	.	ID=SEQF4127.1|KQ960768.1_1_SPACER3;Parent=SEQF4127.1|KQ960768.1_1;Note=AGCGACTTTTGCAAGACTATTCGTGACGGCGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82215	82245	31	+	.	ID=SEQF4127.1|KQ960768.1_1_REPEAT4;Parent=SEQF4127.1|KQ960768.1_1;Note=AGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82246	82280	35	+	.	ID=SEQF4127.1|KQ960768.1_1_SPACER4;Parent=SEQF4127.1|KQ960768.1_1;Note=CCTAGCTTCACTACCCATTCCATCAAAATGGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82281	82311	31	+	.	ID=SEQF4127.1|KQ960768.1_1_REPEAT5;Parent=SEQF4127.1|KQ960768.1_1;Note=AGACATTTATAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82312	82346	35	+	.	ID=SEQF4127.1|KQ960768.1_1_SPACER5;Parent=SEQF4127.1|KQ960768.1_1;Note=ATGTTGATTTTGGTATAGGTAGATACACGTGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82347	82377	31	+	.	ID=SEQF4127.1|KQ960768.1_1_REPEAT6;Parent=SEQF4127.1|KQ960768.1_1;Note=AGACATTTACAGAATCACACTACTNNNNNNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	repeat_region	82463	82762	300	+	.	ID=SEQF4127.1|KQ960768.1_2;Genome_ID=SEQF4127.1;Note=Predictor:CCtyper;Start:82463;End:82762;Consensus_Repeat:GTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:70.7;Spacer_Identity:43.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82463	82498	36	+	.	ID=SEQF4127.1|KQ960768.1_2_REPEAT1;Parent=SEQF4127.1|KQ960768.1_2;Note=NNNNNNNNCATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82499	82528	30	+	.	ID=SEQF4127.1|KQ960768.1_2_SPACER1;Parent=SEQF4127.1|KQ960768.1_2;Note=CGATGGGCCAGTTTTTTGTACGTTCTTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82529	82564	36	+	.	ID=SEQF4127.1|KQ960768.1_2_REPEAT2;Parent=SEQF4127.1|KQ960768.1_2;Note=GTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82565	82594	30	+	.	ID=SEQF4127.1|KQ960768.1_2_SPACER2;Parent=SEQF4127.1|KQ960768.1_2;Note=AGAACAGGTTGAGGTTGGATCTGACGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82595	82630	36	+	.	ID=SEQF4127.1|KQ960768.1_2_REPEAT3;Parent=SEQF4127.1|KQ960768.1_2;Note=GTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82631	82660	30	+	.	ID=SEQF4127.1|KQ960768.1_2_SPACER3;Parent=SEQF4127.1|KQ960768.1_2;Note=CTTGCGTCAATATTTGCGATTGCGTCATTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82661	82696	36	+	.	ID=SEQF4127.1|KQ960768.1_2_REPEAT4;Parent=SEQF4127.1|KQ960768.1_2;Note=GTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82697	82726	30	+	.	ID=SEQF4127.1|KQ960768.1_2_SPACER4;Parent=SEQF4127.1|KQ960768.1_2;Note=AAGACTAGCACTATCACTTTTTAGGGTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82727	82762	36	+	.	ID=SEQF4127.1|KQ960768.1_2_REPEAT5;Parent=SEQF4127.1|KQ960768.1_2;Note=GTTTGAGACATTTACAGAATCACACTANNNNNNNNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	repeat_region	82846	83146	301	+	.	ID=SEQF4127.1|KQ960768.1_3;Genome_ID=SEQF4127.1;Note=Predictor:CCtyper;Start:82846;End:83146;Consensus_Repeat:CGTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Number_of_Repeats:5;Repeat_Length:37;Average_Spacer_Length:29;Repeat_Identity:71.3;Spacer_Identity:46.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.813;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82846	82882	37	+	.	ID=SEQF4127.1|KQ960768.1_3_REPEAT1;Parent=SEQF4127.1|KQ960768.1_3;Note=NNNNNNNNACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82883	82911	29	+	.	ID=SEQF4127.1|KQ960768.1_3_SPACER1;Parent=SEQF4127.1|KQ960768.1_3;Note=TGCCCTCAAATAAGTAAGCACCTGTAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82912	82948	37	+	.	ID=SEQF4127.1|KQ960768.1_3_REPEAT2;Parent=SEQF4127.1|KQ960768.1_3;Note=CGTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	82949	82977	29	+	.	ID=SEQF4127.1|KQ960768.1_3_SPACER2;Parent=SEQF4127.1|KQ960768.1_3;Note=AACCGTGGAGAATACCACGTTATCTCCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	82978	83014	37	+	.	ID=SEQF4127.1|KQ960768.1_3_REPEAT3;Parent=SEQF4127.1|KQ960768.1_3;Note=CGTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	83015	83043	29	+	.	ID=SEQF4127.1|KQ960768.1_3_SPACER3;Parent=SEQF4127.1|KQ960768.1_3;Note=AATGCAATCTGTAGCGACTTCACGATACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	83044	83080	37	+	.	ID=SEQF4127.1|KQ960768.1_3_REPEAT4;Parent=SEQF4127.1|KQ960768.1_3;Note=CGTTTGAGACATTTACAGAATCACACTACTCTCAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	binding_site	83081	83109	29	+	.	ID=SEQF4127.1|KQ960768.1_3_SPACER4;Parent=SEQF4127.1|KQ960768.1_3;Note=CGTAGATACGCCACTTCGTACATCTTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	direct_repeat	83110	83146	37	+	.	ID=SEQF4127.1|KQ960768.1_3_REPEAT5;Parent=SEQF4127.1|KQ960768.1_3;Note=CGTTTGAGACATTTACAGAATCACACTANNNNNNNNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4127.1|KQ960768.1	CCTyper	OPERON	83399	89397	5999	-	.	ID=SEQF4127.1|KQ960768.1@3;Genome_ID=SEQF4127.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_0_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=68,69,70,71;E-values=1.90e-69,3.90e-36,1.80e-89,1.60e-175;CoverageSeq=0.996,0.99,0.922,0.809;CoverageHMM=1.0,1.0,0.996,0.984;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4127.1|KQ960768.1	CCTyper	CDS	84380	85258	293	-	.	ID=SEQF4127.1|KQ960768.1_70_cas;Genome_ID=SEQF4127.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.8e-89;Score=296.0;Coverage_Seq=0.9215017064846417;Coverage_Hmm=0.9963636363636363
SEQF4127.1|KQ960768.1	CCTyper	CDS	84070	84375	102	-	.	ID=SEQF4127.1|KQ960768.1_69_cas;Genome_ID=SEQF4127.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.9e-36;Score=119.8;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF4127.1|KQ960768.1	CCTyper	CDS	85267	89397	1377	-	.	ID=SEQF4127.1|KQ960768.1_71_cas;Genome_ID=SEQF4127.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.6e-175;Score=582.2;Coverage_Seq=0.8090050835148874;Coverage_Hmm=0.9843373493975903
SEQF4127.1|KQ960768.1	CCTyper	CDS	83399	84073	225	-	.	ID=SEQF4127.1|KQ960768.1_68_cas;Genome_ID=SEQF4127.1;Feature_type=CDS;Product=Cas Prediction : Csn2_0_CAS-II-A;coding_strand=-;E-value=1.9e-69;Score=230.0;Coverage_Seq=0.9955555555555555;Coverage_Hmm=1.0