SEQF4164.1|CP028226.1	CCTyper	repeat_region	2343368	2344010	643	+	.	ID=SEQF4164.1|CP028226.1_1;Genome_ID=SEQF4164.1;Note=Predictor:CCtyper;Start:2343368;End:2344010;Consensus_Repeat:GGATCACCCCCGTATACACGGGGAACAG;Number_of_Repeats:11;Repeat_Length:28;Average_Spacer_Length:33.5;Repeat_Identity:97.3;Spacer_Identity:42.6;Spacer_Length_Sem:0.4;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.951;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343368	2343395	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT1;Parent=SEQF4164.1|CP028226.1_1;Note=AGATTACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343396	2343428	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER1;Parent=SEQF4164.1|CP028226.1_1;Note=GTTGAGCCAGAAGCACCTATCTACAATGACACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343429	2343456	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT2;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343457	2343489	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER2;Parent=SEQF4164.1|CP028226.1_1;Note=TAAGCTGAACTAACAAGCTGGTTGATATCCAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343490	2343517	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT3;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343518	2343550	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER3;Parent=SEQF4164.1|CP028226.1_1;Note=ACGTACAAAAAACTGTTGGTAATCTGGAAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343551	2343578	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT4;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343579	2343611	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER4;Parent=SEQF4164.1|CP028226.1_1;Note=CCCATACCAATATCGGAGGACCAATTACTATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343612	2343639	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT5;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343640	2343672	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER5;Parent=SEQF4164.1|CP028226.1_1;Note=AATTGCATTTCCCTGTCGGTAAGATTCCCACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343673	2343700	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT6;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343701	2343733	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER6;Parent=SEQF4164.1|CP028226.1_1;Note=CGTCTACCTATTCCGCCACAAGCACACGTTAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343734	2343761	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT7;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343762	2343794	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER7;Parent=SEQF4164.1|CP028226.1_1;Note=ATGGAAGCGATGAGATGAGAGAAAAATACCATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343795	2343822	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT8;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343823	2343859	37	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER8;Parent=SEQF4164.1|CP028226.1_1;Note=TTCCAGTCCGTGATATAAGTAACTAAGTCATCGTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343860	2343887	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT9;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343888	2343921	34	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER9;Parent=SEQF4164.1|CP028226.1_1;Note=TAGTCGGGTGCCACGAATATGAGCAAAGTTGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343922	2343949	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT10;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2343950	2343982	33	+	.	ID=SEQF4164.1|CP028226.1_1_SPACER10;Parent=SEQF4164.1|CP028226.1_1;Note=TGGTAGGTGATTAAATGGGGCTAATACAGCGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2343983	2344010	28	+	.	ID=SEQF4164.1|CP028226.1_1_REPEAT11;Parent=SEQF4164.1|CP028226.1_1;Note=GGATCACCCCCGTATACACGGGGAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	repeat_region	2348497	2348829	333	+	.	ID=SEQF4164.1|CP028226.1_2;Genome_ID=SEQF4164.1;Note=Predictor:CCtyper;Start:2348497;End:2348829;Consensus_Repeat:GGATCACCCCCGCATACACGGGGAATAG;Number_of_Repeats:6;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:89.6;Spacer_Identity:43.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.979;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2348497	2348524	28	+	.	ID=SEQF4164.1|CP028226.1_2_REPEAT1;Parent=SEQF4164.1|CP028226.1_2;Note=GGGTTACCCCCGTATACACGGGGAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2348525	2348557	33	+	.	ID=SEQF4164.1|CP028226.1_2_SPACER1;Parent=SEQF4164.1|CP028226.1_2;Note=TTTTTAAACCAGTCGAAATCGACGGGTTTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2348558	2348585	28	+	.	ID=SEQF4164.1|CP028226.1_2_REPEAT2;Parent=SEQF4164.1|CP028226.1_2;Note=GGAGCACCCCCACATACACGGGGAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2348586	2348618	33	+	.	ID=SEQF4164.1|CP028226.1_2_SPACER2;Parent=SEQF4164.1|CP028226.1_2;Note=CCACCATTCGGATACTTAGAAGTGTCGATCGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2348619	2348646	28	+	.	ID=SEQF4164.1|CP028226.1_2_REPEAT3;Parent=SEQF4164.1|CP028226.1_2;Note=GGATCACCCCCGCATACACGGGGAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2348647	2348679	33	+	.	ID=SEQF4164.1|CP028226.1_2_SPACER3;Parent=SEQF4164.1|CP028226.1_2;Note=TACCCGGCAATAACTGCACTAGCTGTTTCGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2348680	2348707	28	+	.	ID=SEQF4164.1|CP028226.1_2_REPEAT4;Parent=SEQF4164.1|CP028226.1_2;Note=GGATCACCCCCGCATACACGGGGAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2348708	2348740	33	+	.	ID=SEQF4164.1|CP028226.1_2_SPACER4;Parent=SEQF4164.1|CP028226.1_2;Note=CCAAGTCCCAATGGGCTTTCGATGTTGATGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2348741	2348768	28	+	.	ID=SEQF4164.1|CP028226.1_2_REPEAT5;Parent=SEQF4164.1|CP028226.1_2;Note=GGATCACCCCCGCATACACGGGGAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2348769	2348801	33	+	.	ID=SEQF4164.1|CP028226.1_2_SPACER5;Parent=SEQF4164.1|CP028226.1_2;Note=CAGCTAGCGAATTGGTTGGATAATGGCGGTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2348802	2348829	28	+	.	ID=SEQF4164.1|CP028226.1_2_REPEAT6;Parent=SEQF4164.1|CP028226.1_2;Note=GGATCACCCCCGCATACACGGGGAATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	repeat_region	2357132	2357467	336	+	.	ID=SEQF4164.1|CP028226.1_3;Genome_ID=SEQF4164.1;Note=Predictor:CCtyper;Start:2357132;End:2357467;Consensus_Repeat:GTGTTCCCCATGTATGCGGGGGTGATCC;Number_of_Repeats:6;Repeat_Length:28;Average_Spacer_Length:33.6;Repeat_Identity:93.5;Spacer_Identity:43.5;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2357132	2357159	28	+	.	ID=SEQF4164.1|CP028226.1_3_REPEAT1;Parent=SEQF4164.1|CP028226.1_3;Note=GTGTTCCCCATGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2357160	2357193	34	+	.	ID=SEQF4164.1|CP028226.1_3_SPACER1;Parent=SEQF4164.1|CP028226.1_3;Note=TGACTGACATTGCGAAGTTGAGTGATCGCGATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2357194	2357221	28	+	.	ID=SEQF4164.1|CP028226.1_3_REPEAT2;Parent=SEQF4164.1|CP028226.1_3;Note=GTGTTCCCCATGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2357222	2357254	33	+	.	ID=SEQF4164.1|CP028226.1_3_SPACER2;Parent=SEQF4164.1|CP028226.1_3;Note=TGAGCCTACTGCTGCTAAAGATGCAGTCGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2357255	2357282	28	+	.	ID=SEQF4164.1|CP028226.1_3_REPEAT3;Parent=SEQF4164.1|CP028226.1_3;Note=GTGTTCCCCATGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2357283	2357316	34	+	.	ID=SEQF4164.1|CP028226.1_3_SPACER3;Parent=SEQF4164.1|CP028226.1_3;Note=ACGTGAATTTTGCCATTACATTTCATCCTCTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2357317	2357344	28	+	.	ID=SEQF4164.1|CP028226.1_3_REPEAT4;Parent=SEQF4164.1|CP028226.1_3;Note=GTGTTCCCCATGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2357345	2357378	34	+	.	ID=SEQF4164.1|CP028226.1_3_SPACER4;Parent=SEQF4164.1|CP028226.1_3;Note=TACGCTTAAAACTCAAGTTTTCAAGTATGTTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2357379	2357406	28	+	.	ID=SEQF4164.1|CP028226.1_3_REPEAT5;Parent=SEQF4164.1|CP028226.1_3;Note=GTGTTCCCCATGTATGCGGGGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	binding_site	2357407	2357439	33	+	.	ID=SEQF4164.1|CP028226.1_3_SPACER5;Parent=SEQF4164.1|CP028226.1_3;Note=CGACTGTTCCAGCCTTGCCCGTGAAGCTAAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	direct_repeat	2357440	2357467	28	+	.	ID=SEQF4164.1|CP028226.1_3_REPEAT6;Parent=SEQF4164.1|CP028226.1_3;Note=GTGTTCCCCGTGTATGCGGGGGTGTGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4164.1|CP028226.1	CCTyper	OPERON	2346560	2356934	10375	+	.	ID=SEQF4164.1|CP028226.1@38;Genome_ID=SEQF4164.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas1_0_IE,Cas2_10_CAS-I-II-III-IV-V-VI,DEDDh_0_CAS-I-II-III-IV-V-VI,Cas3_0_CAS-I,Cas8e_1_CAS-I-E,Cse2gr11_5_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_CAS-I-E,Cas6e_1_CAS-I-II-III-IV-V-VI;Positions=2151,2152,2153,2154,2155,2156,2157,2158,2159;E-values=1.40e-108,1.20e-31,1.10e-16,6.40e-62,2.50e-105,2.60e-72,1.00e-118,4.60e-41,1.30e-50;CoverageSeq=0.845,0.515,0.857,0.505,0.906,0.975,0.883,0.669,0.982;CoverageHMM=0.993,1.0,0.613,0.992,0.996,0.975,0.93,0.984,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF4164.1|CP028226.1	CCTyper	CDS	2346560	2347510	317	+	.	ID=SEQF4164.1|CP028226.1_2151_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=1.4e-108;Score=359.5;Coverage_Seq=0.8454258675078864;Coverage_Hmm=0.9925650557620818
SEQF4164.1|CP028226.1	CCTyper	CDS	2347507	2348001	165	+	.	ID=SEQF4164.1|CP028226.1_2152_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-31;Score=106.1;Coverage_Seq=0.5151515151515151;Coverage_Hmm=1.0
SEQF4164.1|CP028226.1	CCTyper	CDS	2349380	2352127	916	+	.	ID=SEQF4164.1|CP028226.1_2154_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=6.3999999999999996e-62;Score=207.0;Coverage_Seq=0.5054585152838428;Coverage_Hmm=0.9915014164305949
SEQF4164.1|CP028226.1	CCTyper	CDS	2355542	2356249	236	+	.	ID=SEQF4164.1|CP028226.1_2158_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=+;E-value=4.6e-41;Score=138.0;Coverage_Seq=0.6694915254237288;Coverage_Hmm=0.9835164835164835
SEQF4164.1|CP028226.1	CCTyper	CDS	2356263	2356934	224	+	.	ID=SEQF4164.1|CP028226.1_2159_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-50;Score=169.8;Coverage_Seq=0.9821428571428571;Coverage_Hmm=1.0
SEQF4164.1|CP028226.1	CCTyper	CDS	2354482	2355561	360	+	.	ID=SEQF4164.1|CP028226.1_2157_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=1e-118;Score=394.3;Coverage_Seq=0.8833333333333333;Coverage_Hmm=0.9303621169916435
SEQF4164.1|CP028226.1	CCTyper	CDS	2352133	2353863	577	+	.	ID=SEQF4164.1|CP028226.1_2155_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=+;E-value=2.5e-105;Score=350.7;Coverage_Seq=0.9064124783362218;Coverage_Hmm=0.9957805907172996
SEQF4164.1|CP028226.1	CCTyper	CDS	2353877	2354482	202	+	.	ID=SEQF4164.1|CP028226.1_2156_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_5_CAS-I-E;coding_strand=+;E-value=2.6e-72;Score=240.0;Coverage_Seq=0.9752475247524752;Coverage_Hmm=0.9748743718592965
SEQF4164.1|CP028226.1	CCTyper	CDS	2348061	2348396	112	+	.	ID=SEQF4164.1|CP028226.1_2153_cas;Genome_ID=SEQF4164.1;Feature_type=CDS;Product=Cas Prediction : DEDDh_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.1e-16;Score=58.8;Coverage_Seq=0.8571428571428571;Coverage_Hmm=0.6125