SEQF4172.1|AP018405.1	CCTyper	repeat_region	1552980	1553478	499	+	.	ID=SEQF4172.1|AP018405.1_1;Genome_ID=SEQF4172.1;Note=Predictor:CCtyper;Start:1552980;End:1553478;Consensus_Repeat:GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Number_of_Repeats:8;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:100.0;Spacer_Identity:43.0;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1552980	1553015	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT1;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553016	1553045	30	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER1;Parent=SEQF4172.1|AP018405.1_1;Note=TCCTTTCCTTATATATGTTTATAGTATAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553046	1553081	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT2;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553082	1553112	31	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER2;Parent=SEQF4172.1|AP018405.1_1;Note=TACGGTACTCAATTACGATTAGATAATACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553113	1553148	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT3;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553149	1553178	30	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER3;Parent=SEQF4172.1|AP018405.1_1;Note=GTAATTGTGGCTACGGCATTCTTAATTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553179	1553214	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT4;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553215	1553244	30	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER4;Parent=SEQF4172.1|AP018405.1_1;Note=GTAATTGTGGCTACGGCATTCTTAATTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553245	1553280	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT5;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553281	1553310	30	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER5;Parent=SEQF4172.1|AP018405.1_1;Note=CCTTGCAAGCACCGCTGCTGCCACAAACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553311	1553346	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT6;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553347	1553376	30	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER6;Parent=SEQF4172.1|AP018405.1_1;Note=CACCCTCGTGGTTCGACACAGCCTTTTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553377	1553412	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT7;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	binding_site	1553413	1553442	30	+	.	ID=SEQF4172.1|AP018405.1_1_SPACER7;Parent=SEQF4172.1|AP018405.1_1;Note=CAGCCCAATTCTCACCAGCAGAACTAGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	direct_repeat	1553443	1553478	36	+	.	ID=SEQF4172.1|AP018405.1_1_REPEAT8;Parent=SEQF4172.1|AP018405.1_1;Note=GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4172.1|AP018405.1	CCTyper	OPERON	1553503	1559636	6134	-	.	ID=SEQF4172.1|AP018405.1@26;Genome_ID=SEQF4172.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=1487,1488,1489,1490;E-values=2.90e-72,1.30e-49,8.40e-81,1.10e-168;CoverageSeq=0.973,0.99,0.884,0.752;CoverageHMM=1.0,1.0,0.993,0.972;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4172.1|AP018405.1	CCTyper	CDS	1554460	1555365	302	-	.	ID=SEQF4172.1|AP018405.1_1489_cas;Genome_ID=SEQF4172.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.400000000000001e-81;Score=268.7;Coverage_Seq=0.8841059602649006;Coverage_Hmm=0.9927272727272727
SEQF4172.1|AP018405.1	CCTyper	CDS	1554177	1554482	102	-	.	ID=SEQF4172.1|AP018405.1_1488_cas;Genome_ID=SEQF4172.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3e-49;Score=164.1;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF4172.1|AP018405.1	CCTyper	CDS	1555560	1559636	1359	-	.	ID=SEQF4172.1|AP018405.1_1490_cas;Genome_ID=SEQF4172.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.1000000000000001e-168;Score=560.8;Coverage_Seq=0.7520235467255335;Coverage_Hmm=0.9722891566265061
SEQF4172.1|AP018405.1	CCTyper	CDS	1553503	1554180	226	-	.	ID=SEQF4172.1|AP018405.1_1487_cas;Genome_ID=SEQF4172.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=2.9e-72;Score=240.5;Coverage_Seq=0.9734513274336283;Coverage_Hmm=1.0