SEQF4259.1|JACAWI010000044.1	CCTyper	repeat_region	18690	19187	498	+	.	ID=SEQF4259.1|JACAWI010000044.1_1;Genome_ID=SEQF4259.1;Note=Predictor:CCtyper;Start:18690;End:19187;Consensus_Repeat:GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Number_of_Repeats:8;Repeat_Length:32;Average_Spacer_Length:34.6;Repeat_Identity:98.5;Spacer_Identity:39.7;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-C;Cas_Subtype_Prediction:I-C;Subtype_Probability:0.972;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	18690	18721	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT1;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACGCACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	18722	18755	34	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER1;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=TTCCAAACCAATTTTAGTGCGTAATTCATCACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	18756	18787	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT2;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	18788	18821	34	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER2;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=TACCAAAATGCAAGGCGGTATTAACCAAGCGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	18822	18853	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT3;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	18854	18889	36	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER3;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=TTTGAACACGTTGCCTGCTTATATAAATTTTTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	18890	18921	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT4;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	18922	18956	35	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER4;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=CGACTGCTTATGCTGATAAAGCTAAAAATATTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	18957	18988	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT5;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	18989	19022	34	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER5;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=ATCAAGCGAGGCGCGCAACCTTGGGCGGGCGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	19023	19054	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT6;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	19055	19088	34	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER6;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=TCATGAAAAAAGTTATCTTGTGACTTACCATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	19089	19120	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT7;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	binding_site	19121	19155	35	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_SPACER7;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GGATTGCTTAAATGGCTTTTTGATTCGGTTGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	direct_repeat	19156	19187	32	+	.	ID=SEQF4259.1|JACAWI010000044.1_1_REPEAT8;Parent=SEQF4259.1|JACAWI010000044.1_1;Note=GTTTCAACACACAGCCACCTGAAGGTGGCTGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	repeat_region	95132	95428	297	+	.	ID=SEQF4259.1|JACAWI010000051.1_2;Genome_ID=SEQF4259.1;Note=Predictor:CCtyper;Start:95132;End:95428;Consensus_Repeat:GCGGCCATCTTCGGGTGACTGTGTGTTGAAAC;Number_of_Repeats:5;Repeat_Length:32;Average_Spacer_Length:34.2;Repeat_Identity:93.1;Spacer_Identity:44.3;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.328;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	direct_repeat	95132	95163	32	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_REPEAT1;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=GCGGCCATCTTCGGGTGACTGTGTGTTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	binding_site	95164	95196	33	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_SPACER1;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=CTTAATAACAGGTGCCGATAACGACACTGTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	direct_repeat	95197	95228	32	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_REPEAT2;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=GCGGCCATCTTCGGGTGACTGTGTGTTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	binding_site	95229	95263	35	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_SPACER2;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=ACTTACAATTAGCCGTACTTTTGTAGGTATCGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	direct_repeat	95264	95295	32	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_REPEAT3;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=GCGGCCATCTTCGGGTGACTGTGTGTTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	binding_site	95296	95330	35	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_SPACER3;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=TCCATTAATAAGATTTAGCAGTTGTCTTTCTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	direct_repeat	95331	95362	32	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_REPEAT4;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=GCGGCCATCTTCGGGTGACTGTGTGTTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	binding_site	95363	95396	34	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_SPACER4;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=AATCTAAAATCCCCAAAACGCCCGTGAATTTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000051.1	CCTyper	direct_repeat	95397	95428	32	+	.	ID=SEQF4259.1|JACAWI010000051.1_2_REPEAT5;Parent=SEQF4259.1|JACAWI010000051.1_2;Note=GCGGCCATCTTCGGGTGACTATGTGCTGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4259.1|JACAWI010000044.1	CCTyper	OPERON	19379	29366	9988	-	.	ID=SEQF4259.1|JACAWI010000044.1@1;Genome_ID=SEQF4259.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-C;Best_score=21.0;Genes=Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_IC,Cas4_0_I-II,Cas7_0_IC,Cas8c_1_CAS-I-C,Cas5_1_CAS-I-C,Cas3_1_CAS-I;Positions=18,19,21,22,23,24,25;E-values=8.60e-27,7.10e-148,5.20e-41,4.80e-109,1.10e-153,5.30e-76,8.40e-55;CoverageSeq=0.847,0.988,0.818,0.956,0.971,0.939,0.441;CoverageHMM=0.987,1.0,1.0,0.979,1.0,0.99,0.497;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4259.1|JACAWI010000051.1	CCTyper	OPERON	76742	94016	17275	+	.	ID=SEQF4259.1|JACAWI010000051.1@3;Genome_ID=SEQF4259.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-C;Complete_Interference=100%;Complete_Adaptation=0%;Best_type=I-C;Best_score=14.0;Genes=AbiEii_0_CAS-III,Cas3_0_CAS-I,PD_DExK_0_CAS-I-II-III-IV-V-VI,Cas5_1_CAS-I-C,Cas8c_1_CAS-I-C,Cas7_1_CAS-I-C;Positions=93,97,101,103,104,105;E-values=1.10e-05,1.10e-06,7.10e-54,2.80e-85,8.20e-187,1.70e-116;CoverageSeq=0.461,0.353,0.69,0.942,0.976,0.969;CoverageHMM=0.465,0.541,0.975,1.0,0.998,0.996;Strand_Interference=1;Strand_Adaptation=NA
SEQF4259.1|JACAWI010000051.1	CCTyper	CDS	76742	77632	297	-	.	ID=SEQF4259.1|JACAWI010000051.1_93_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=1.1e-05;Score=22.2;Coverage_Seq=0.4612794612794613;Coverage_Hmm=0.4647887323943662
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	19676	20689	338	-	.	ID=SEQF4259.1|JACAWI010000044.1_19_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IC;coding_strand=-;E-value=7.1e-148;Score=489.3;Coverage_Seq=0.9881656804733728;Coverage_Hmm=1.0
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	19379	19672	98	-	.	ID=SEQF4259.1|JACAWI010000044.1_18_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.6e-27;Score=90.3;Coverage_Seq=0.8469387755102041;Coverage_Hmm=0.9873417721518988
SEQF4259.1|JACAWI010000051.1	CCTyper	CDS	80514	82163	550	+	.	ID=SEQF4259.1|JACAWI010000051.1_97_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=1.1e-06;Score=25.0;Coverage_Seq=0.3527272727272727;Coverage_Hmm=0.5410764872521246
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	26871	29366	832	-	.	ID=SEQF4259.1|JACAWI010000044.1_25_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=8.399999999999999e-55;Score=183.4;Coverage_Seq=0.4411057692307692;Coverage_Hmm=0.4966442953020134
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	22614	23273	220	-	.	ID=SEQF4259.1|JACAWI010000044.1_21_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas4_0_I-II;coding_strand=-;E-value=5.2e-41;Score=137.4;Coverage_Seq=0.8181818181818182;Coverage_Hmm=1.0
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	26163	26846	228	-	.	ID=SEQF4259.1|JACAWI010000044.1_24_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-C;coding_strand=-;E-value=5.3e-76;Score=252.0;Coverage_Seq=0.9385964912280702;Coverage_Hmm=0.98989898989899
SEQF4259.1|JACAWI010000051.1	CCTyper	CDS	90688	91362	225	+	.	ID=SEQF4259.1|JACAWI010000051.1_103_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-C;coding_strand=+;E-value=2.8e-85;Score=282.2;Coverage_Seq=0.9422222222222222;Coverage_Hmm=1.0
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	23515	24396	294	-	.	ID=SEQF4259.1|JACAWI010000044.1_22_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IC;coding_strand=-;E-value=4.8e-109;Score=361.1;Coverage_Seq=0.95578231292517;Coverage_Hmm=0.9788732394366197
SEQF4259.1|JACAWI010000051.1	CCTyper	CDS	93150	94016	289	+	.	ID=SEQF4259.1|JACAWI010000051.1_105_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-C;coding_strand=+;E-value=1.7e-116;Score=385.4;Coverage_Seq=0.9688581314878892;Coverage_Hmm=0.9964028776978417
SEQF4259.1|JACAWI010000044.1	CCTyper	CDS	24409	26166	586	-	.	ID=SEQF4259.1|JACAWI010000044.1_23_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_1_CAS-I-C;coding_strand=-;E-value=1.1e-153;Score=509.9;Coverage_Seq=0.9709897610921502;Coverage_Hmm=1.0
SEQF4259.1|JACAWI010000051.1	CCTyper	CDS	91359	93137	593	+	.	ID=SEQF4259.1|JACAWI010000051.1_104_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_1_CAS-I-C;coding_strand=+;E-value=8.199999999999999e-187;Score=619.2;Coverage_Seq=0.9763912310286678;Coverage_Hmm=0.9982456140350877
SEQF4259.1|JACAWI010000051.1	CCTyper	CDS	86680	87735	352	+	.	ID=SEQF4259.1|JACAWI010000051.1_101_cas;Genome_ID=SEQF4259.1;Feature_type=CDS;Product=Cas Prediction : PD_DExK_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.1e-54;Score=179.1;Coverage_Seq=0.6903409090909091;Coverage_Hmm=0.9748427672955975