SEQF4321.1|RQOY01000003.1	CCTyper	repeat_region	98460	99420	961	+	.	ID=SEQF4321.1|RQOY01000003.1_1;Genome_ID=SEQF4321.1;Note=Predictor:CCtyper;Start:98460;End:99420;Consensus_Repeat:GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:30.1;Repeat_Identity:97.8;Spacer_Identity:41.9;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.994;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98460	98495	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT1;Parent=SEQF4321.1|RQOY01000003.1_1;Note=ATTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98496	98525	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER1;Parent=SEQF4321.1|RQOY01000003.1_1;Note=ACGATTGCCGACGGTTTGGAGAAATCTAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98526	98561	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT2;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAATATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98562	98591	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER2;Parent=SEQF4321.1|RQOY01000003.1_1;Note=TGCCATTTACGCGCACGTTTCCAGATTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98592	98627	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT3;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98628	98658	31	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER3;Parent=SEQF4321.1|RQOY01000003.1_1;Note=TGTCTAAATTCTGCTAGCTTGGCTTCACTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98659	98694	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT4;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98695	98724	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER4;Parent=SEQF4321.1|RQOY01000003.1_1;Note=AGCGTCCAATGCTTCTCGAGTGCGAGTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98725	98760	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT5;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98761	98790	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER5;Parent=SEQF4321.1|RQOY01000003.1_1;Note=AGATCAGCTAAGATGCCGTCCATATTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98791	98826	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT6;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98827	98856	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER6;Parent=SEQF4321.1|RQOY01000003.1_1;Note=CAAAGACTTGCTAATGAAGAAAAATTTGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98857	98892	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT7;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98893	98922	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER7;Parent=SEQF4321.1|RQOY01000003.1_1;Note=TGTTAAAACGTAACTTTCCTGAGGATGGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98923	98958	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT8;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	98959	98988	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER8;Parent=SEQF4321.1|RQOY01000003.1_1;Note=TTTAATTCTGTGCTAGCACCGCTCCCACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	98989	99024	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT9;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	99025	99054	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER9;Parent=SEQF4321.1|RQOY01000003.1_1;Note=TTGCTCTATAAGTTTGTTAGTCAGGGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	99055	99090	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT10;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	99091	99120	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER10;Parent=SEQF4321.1|RQOY01000003.1_1;Note=ATTCTATGGTTGGTAGGACAGTTATTGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	99121	99156	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT11;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	99157	99186	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER11;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTCAGTGTCGCTCTATAGGCCAAGGCCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	99187	99222	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT12;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	99223	99252	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER12;Parent=SEQF4321.1|RQOY01000003.1_1;Note=TTCTGAGATAACTTTATCCCAATCCCAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	99253	99288	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT13;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	99289	99318	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER13;Parent=SEQF4321.1|RQOY01000003.1_1;Note=ATTTGTCCTTTAGCGTGTGCCCAAAGTTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	99319	99354	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT14;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	binding_site	99355	99384	30	+	.	ID=SEQF4321.1|RQOY01000003.1_1_SPACER14;Parent=SEQF4321.1|RQOY01000003.1_1;Note=AAAGAGATATCAGACCGATTAGGCCATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	direct_repeat	99385	99420	36	+	.	ID=SEQF4321.1|RQOY01000003.1_1_REPEAT15;Parent=SEQF4321.1|RQOY01000003.1_1;Note=GTTTTGGGACCATTCGAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4321.1|RQOY01000003.1	CCTyper	OPERON	99511	105470	5960	-	.	ID=SEQF4321.1|RQOY01000003.1@2;Genome_ID=SEQF4321.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=98,99,100,101;E-values=5.70e-99,5.30e-50,2.20e-98,0.00e+00;CoverageSeq=0.982,0.965,0.933,0.996;CoverageHMM=0.995,0.983,0.975,0.999;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4321.1|RQOY01000003.1	CCTyper	CDS	100504	101349	282	-	.	ID=SEQF4321.1|RQOY01000003.1_100_cas;Genome_ID=SEQF4321.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.2e-98;Score=325.5;Coverage_Seq=0.9326241134751773;Coverage_Hmm=0.9745454545454545
SEQF4321.1|RQOY01000003.1	CCTyper	CDS	100163	100507	115	-	.	ID=SEQF4321.1|RQOY01000003.1_99_cas;Genome_ID=SEQF4321.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.3e-50;Score=165.2;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF4321.1|RQOY01000003.1	CCTyper	CDS	101370	105470	1367	-	.	ID=SEQF4321.1|RQOY01000003.1_101_cas;Genome_ID=SEQF4321.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1246.1;Coverage_Seq=0.9956108266276518;Coverage_Hmm=0.9991071428571429
SEQF4321.1|RQOY01000003.1	CCTyper	CDS	99511	100173	221	-	.	ID=SEQF4321.1|RQOY01000003.1_98_cas;Genome_ID=SEQF4321.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=5.6999999999999995e-99;Score=326.9;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973