SEQF4401.1|RJNA01000003.1	CCTyper	repeat_region	53921	55473	1553	+	.	ID=SEQF4401.1|RJNA01000003.1_1;Genome_ID=SEQF4401.1;Note=Predictor:CCtyper;Start:53921;End:55473;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:24;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:41.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	53921	53956	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT1;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	53957	53986	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER1;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AGTTATTCTGATGGGTCTTATGATAATTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	53987	54022	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT2;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54023	54052	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER2;Parent=SEQF4401.1|RJNA01000003.1_1;Note=TAAAAATAGTCTTTCTCTTTGATATAGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54053	54088	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT3;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54089	54118	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER3;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GCCAGGTACTGTCCTAATTCACCGATACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54119	54154	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT4;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54155	54184	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER4;Parent=SEQF4401.1|RJNA01000003.1_1;Note=TGCAGCCATCTATGACGTTCGTGGTATTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54185	54220	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT5;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54221	54249	29	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER5;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AAATATCTACCACAGGAAATATTTCATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54250	54285	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT6;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54286	54315	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER6;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CTTTTTTGTTGATGGTCAATGTCTCAATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54316	54351	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT7;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54352	54381	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER7;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AAAACAATCTCAAGGAGAAATTATCATGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54382	54417	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT8;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54418	54447	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER8;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CACGCAAGAGCCCTATAAACCTTCAACCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54448	54483	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT9;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54484	54513	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER9;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CGATGTCTTGGATAGGGTTCAAGCAAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54514	54549	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT10;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54550	54579	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER10;Parent=SEQF4401.1|RJNA01000003.1_1;Note=TGTTGTGAAATGTGCTAAGAAAGTCAATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54580	54615	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT11;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54616	54645	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER11;Parent=SEQF4401.1|RJNA01000003.1_1;Note=TCCTGACTGCCAGATTAAAGAGCAGTATCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54646	54681	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT12;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54682	54711	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER12;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AAGTCAACGAGGGTACCCCCCGAAGCGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54712	54747	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT13;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54748	54777	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER13;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GCAGAGGCAGCCTATCATCATCCATAAGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54778	54813	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT14;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54814	54843	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER14;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CAGCCGTTACTGTGTAATTTTCGTACTTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54844	54879	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT15;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54880	54909	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER15;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AGGAATTCTGGCCAACCCCGTATACTGCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54910	54945	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT16;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	54946	54975	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER16;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AATGAGGGCTTAAGGCTCTACACAGACACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	54976	55011	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT17;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55012	55041	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER17;Parent=SEQF4401.1|RJNA01000003.1_1;Note=TAAATTGTTCAATCTCAGCCATCTTGCGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55042	55077	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT18;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55078	55107	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER18;Parent=SEQF4401.1|RJNA01000003.1_1;Note=TAAATTCGATCATTCTTAATCCACCCCCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55108	55143	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT19;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55144	55173	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER19;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CGCTGGCCGTCTTTTGATTGACCAACTGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55174	55209	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT20;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55210	55239	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER20;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CCATCGTATCCAGTGAACGTCACTACTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55240	55275	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT21;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55276	55305	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER21;Parent=SEQF4401.1|RJNA01000003.1_1;Note=AGTACGCATTTAGAAATGCTGAGGATATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55306	55341	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT22;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55342	55371	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER22;Parent=SEQF4401.1|RJNA01000003.1_1;Note=CTCTCCTCACCAACTAATATCGGAAGCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55372	55407	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT23;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55408	55437	30	+	.	ID=SEQF4401.1|RJNA01000003.1_1_SPACER23;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTCAAATCTCAGATAGAAACTAGGGCGGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55438	55473	36	+	.	ID=SEQF4401.1|RJNA01000003.1_1_REPEAT24;Parent=SEQF4401.1|RJNA01000003.1_1;Note=GTTTTTGTACTCATAAGGAGCGTTGACTTTTAGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	repeat_region	55479	56897	1419	+	.	ID=SEQF4401.1|RJNA01000003.1_2;Genome_ID=SEQF4401.1;Note=Predictor:CCtyper;Start:55479;End:56897;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:22;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:39.4;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55479	55514	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT1;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55515	55544	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER1;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTCAAATCTCAGATAGAAACTAGGGCGGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55545	55580	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT2;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55581	55609	29	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER2;Parent=SEQF4401.1|RJNA01000003.1_2;Note=AGTGCAGCCAATCTATACGAAGTTATTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55610	55645	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT3;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55646	55674	29	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER3;Parent=SEQF4401.1|RJNA01000003.1_2;Note=TCCCTACGAAATTCCATTGTTTCAGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55675	55710	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT4;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55711	55740	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER4;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GCCAGCTCGTCATAGGTATAGCTCCAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55741	55776	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT5;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55777	55806	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER5;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GGTCTTTTTTGTCTGCTGTTTCCAAAACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55807	55842	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT6;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55843	55872	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER6;Parent=SEQF4401.1|RJNA01000003.1_2;Note=ATTTTAATACTAAGAAATTAACCACCGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55873	55908	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT7;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55909	55938	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER7;Parent=SEQF4401.1|RJNA01000003.1_2;Note=TGTTAGCACGGATTATCTCCTAGGGCGCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	55939	55974	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT8;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	55975	56004	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER8;Parent=SEQF4401.1|RJNA01000003.1_2;Note=CCCTCCGTAACAGTGTACATAAGAAAGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56005	56040	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT9;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56041	56069	29	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER9;Parent=SEQF4401.1|RJNA01000003.1_2;Note=CTAGAGGCTAAAGCTAGTGCTGCTACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56070	56105	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT10;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56106	56135	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER10;Parent=SEQF4401.1|RJNA01000003.1_2;Note=ATTTGGCAAGGATATCAAAACCCTGCTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56136	56171	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT11;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56172	56201	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER11;Parent=SEQF4401.1|RJNA01000003.1_2;Note=AAACAGCTTCAGGTGGTGCTATCGGACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56202	56237	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT12;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56238	56267	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER12;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GAGTCGATAGTGGCCCGGCTTCCGGTTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56268	56303	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT13;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56304	56333	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER13;Parent=SEQF4401.1|RJNA01000003.1_2;Note=CTATTTCCAAGTTGTCAGACCTACTCATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56334	56369	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT14;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56370	56399	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER14;Parent=SEQF4401.1|RJNA01000003.1_2;Note=TGCCTTTGACCTCAAGCAAAAGCTTAAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56400	56435	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT15;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56436	56465	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER15;Parent=SEQF4401.1|RJNA01000003.1_2;Note=TCATCTTCCACCTCCTCAATCTCAATGCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56466	56501	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT16;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56502	56531	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER16;Parent=SEQF4401.1|RJNA01000003.1_2;Note=TAATGTGTACTTCGTGAACGTTTCGACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56532	56567	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT17;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56568	56597	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER17;Parent=SEQF4401.1|RJNA01000003.1_2;Note=AATTTGCTATGACAGTTAATGCAATTTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56598	56633	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT18;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56634	56663	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER18;Parent=SEQF4401.1|RJNA01000003.1_2;Note=TGGGACCATCGTCGAAGGGCGAACTCACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56664	56699	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT19;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56700	56729	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER19;Parent=SEQF4401.1|RJNA01000003.1_2;Note=CGTCGTTTGGTATAAGGAAGTTTCGTCTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56730	56765	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT20;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56766	56795	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER20;Parent=SEQF4401.1|RJNA01000003.1_2;Note=AATCCTGCTCTGAATGTCCATATCAAGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56796	56831	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT21;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	56832	56861	30	+	.	ID=SEQF4401.1|RJNA01000003.1_2_SPACER21;Parent=SEQF4401.1|RJNA01000003.1_2;Note=CTCCGCCCGGTTTTAGGTGGTTGTTTGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	56862	56897	36	+	.	ID=SEQF4401.1|RJNA01000003.1_2_REPEAT22;Parent=SEQF4401.1|RJNA01000003.1_2;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	repeat_region	69820	71651	1832	+	.	ID=SEQF4401.1|RJNA01000003.1_3;Genome_ID=SEQF4401.1;Note=Predictor:CCtyper;Start:69820;End:71651;Consensus_Repeat:CCCCCTAATCCTCGAGAGGGGACGGAAAC;Number_of_Repeats:26;Repeat_Length:29;Average_Spacer_Length:43.1;Repeat_Identity:73.8;Spacer_Identity:46.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.556;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	69820	69848	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT1;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCAAAAAATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	69849	69891	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER1;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TTTTGTAAAAATAGTAGTTCGTCTTCGCTTATTTTGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	69892	69920	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT2;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCGAAAATCCTCGCGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	69921	69963	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER2;Parent=SEQF4401.1|RJNA01000003.1_3;Note=GCTTGAGCCATGTTTTCAAATGTAGACCAGTTTATGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	69964	69992	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT3;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCAAAATCCTCGAGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	69993	70034	42	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER3;Parent=SEQF4401.1|RJNA01000003.1_3;Note=AGCTCTGGATTTTCGTAGATGTTACCGATGATTTCATTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70035	70063	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT4;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CTCCCTAATCCTCGCGAGGGTACGGAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70064	70105	42	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER4;Parent=SEQF4401.1|RJNA01000003.1_3;Note=GGAAAAATAGCTGCACGATGTTCTGACCCAAGACCATTAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70106	70134	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT5;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCAAAAATCCTCGGGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70135	70177	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER5;Parent=SEQF4401.1|RJNA01000003.1_3;Note=AAAAAGTTCTTTTTGCGAAGAAGCCCCATTGGTTGGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70178	70206	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT6;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCTATATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70207	70250	44	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER6;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TCATATCCCATTTCATCCAATCGACCTACAGAAATTCGTTAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70251	70279	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT7;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCTAAATCCTCGAGAGGGAACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70280	70324	45	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER7;Parent=SEQF4401.1|RJNA01000003.1_3;Note=GCATTGCTTGTTTGAGTAAAGCACATTATTGTAACTTCGTTAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70325	70353	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT8;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCATAACCCTCGAGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70354	70396	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER8;Parent=SEQF4401.1|RJNA01000003.1_3;Note=GCGAAAAGGTGCGACCGAGAATCTCGAAAGTGTATGTTAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70397	70425	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT9;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCAAAAATCCTCGCGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70426	70471	46	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER9;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TTACAAACCATAACCAGAACAAAATAGCTTTTCAACTGTTAGCCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70472	70500	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT10;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCATATCCTCGCAAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70501	70544	44	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER10;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TAATTTTGGGAGCATATAATTTCCCACTCTTTTTTGGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70545	70573	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT11;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CTCCCTAATCCTCGATAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70574	70614	41	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER11;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CTGAATGGAATAGTGAATGAAGGAGTATCAGTTGGTTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70615	70643	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT12;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCTAATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70644	70687	44	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER12;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CTAATAAAACTTACAGCAGGGGTAAAGCCCTCAGACAGTTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70688	70716	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT13;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCTAATCCTCGAGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70717	70759	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER13;Parent=SEQF4401.1|RJNA01000003.1_3;Note=AAAAAATCGTTTGTTTTTCAGGTAATTGTAATTTCAGTTAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70760	70788	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT14;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCTAAACCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70789	70831	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER14;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TCTTTTGAAATTTTATAGGCAAACGCTTCCACTGCGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70832	70860	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT15;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCACCTAATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70861	70904	44	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER15;Parent=SEQF4401.1|RJNA01000003.1_3;Note=AAATGGGTTGGTTTTCTTACCAAATTGAGCCCCAATGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70905	70933	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT16;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCTAATCCTCGAGAGGGGACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	70934	70976	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER16;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TCGGAATTGGAAACCTACAGTACCTGCAACGTTGAGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	70977	71005	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT17;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCACCAAATCCTCGCGAGGGTACTGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71006	71048	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER17;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TCATAGGTTACAGCAGGATAGCAATTCTTTTTCAGGTGAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71049	71077	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT18;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CACACTAATCCTCGCAAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71078	71120	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER18;Parent=SEQF4401.1|RJNA01000003.1_3;Note=GCACAAGCCCAGTGCGCAAGCAAAGCGCTATCCATCGTTGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71121	71149	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT19;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCATATCCTCGCTAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71150	71191	42	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER19;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CAACTTGATAGGCTAGTTCCTTCTTTTTCCATTAGTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71192	71220	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT20;Parent=SEQF4401.1|RJNA01000003.1_3;Note=TCTCCTAATCCTCGAGAGGCTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71221	71262	42	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER20;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CTGCTTTCAAATTACTAAGGTAAAACCTCGTATCTGTTAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71263	71291	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT21;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCTAAACCTCGCTAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71292	71333	42	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER21;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CAGATAGGACAATTGTCGCCAACTAACTCGAACCGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71334	71362	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT22;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCATAATCCTCGCGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71363	71407	45	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER22;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CATATTTTAACTTCATCAATGCGCCCATTATTTATGAGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71408	71436	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT23;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCACCTAATCCTCGAGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71437	71479	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER23;Parent=SEQF4401.1|RJNA01000003.1_3;Note=AGACCGTATTGTTTTGCATAGTTCGGATATTTTTCGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71480	71508	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT24;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCTCCATATCCTCGAGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71509	71551	43	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER24;Parent=SEQF4401.1|RJNA01000003.1_3;Note=ACGATACTGAGGAATTAAACGTATAGACATTCTATGTTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71552	71580	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT25;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCTCCATATCCTCGAGAGGGTACGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	binding_site	71581	71622	42	+	.	ID=SEQF4401.1|RJNA01000003.1_3_SPACER25;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CGCCTTTTCATTGTCTACAGAAGTATTGGCCTTAGTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	direct_repeat	71623	71651	29	+	.	ID=SEQF4401.1|RJNA01000003.1_3_REPEAT26;Parent=SEQF4401.1|RJNA01000003.1_3;Note=CCCCCTAATCCTCGAGAGGGGACAGAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4401.1|RJNA01000003.1	CCTyper	OPERON	48027	60026	12000	+	.	ID=SEQF4401.1|RJNA01000003.1@2;Genome_ID=SEQF4401.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A,AbiEii_0_CAS-III;Positions=41,42,43,44,48;E-values=6.60e-209,1.20e-95,3.70e-32,4.50e-130,1.50e-07;CoverageSeq=0.738,0.911,0.981,0.994,0.55;CoverageHMM=0.983,0.956,0.871,1.0,0.426;Strand_Interference=1;Strand_Adaptation=1
SEQF4401.1|RJNA01000003.1	CCTyper	OPERON	66658	79473	12816	+	.	ID=SEQF4401.1|RJNA01000003.1@3;Genome_ID=SEQF4401.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Csm6_7_CAS-III,Cas1_0_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas6_0_CAS-I-II-III-IV-V-VI,Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_3_CAS-III;Positions=56,58,59,60,61,62,63,64,65,66,67;E-values=9.50e-27,9.30e-21,9.70e-53,5.70e-20,1.00e-24,4.50e-142,1.10e-20,1.50e-68,1.50e-40,1.10e-34,2.10e-40;CoverageSeq=0.942,0.964,0.889,0.676,0.751,0.776,0.692,0.835,0.98,0.784,0.717;CoverageHMM=0.673,0.338,0.555,0.937,0.871,0.907,0.955,0.967,0.978,0.786,0.832;Strand_Interference=1;Strand_Adaptation=NA
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	59361	60026	222	+	.	ID=SEQF4401.1|RJNA01000003.1_48_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=1.5e-07;Score=28.1;Coverage_Seq=0.5495495495495496;Coverage_Hmm=0.426056338028169
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	72586	74874	763	+	.	ID=SEQF4401.1|RJNA01000003.1_62_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=4.5e-142;Score=471.7;Coverage_Seq=0.7758846657929227;Coverage_Hmm=0.9067278287461774
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	68215	68550	112	+	.	ID=SEQF4401.1|RJNA01000003.1_58_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.3e-21;Score=71.1;Coverage_Seq=0.9642857142857143;Coverage_Hmm=0.33753943217665616
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	68638	69234	199	+	.	ID=SEQF4401.1|RJNA01000003.1_59_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.7e-53;Score=176.1;Coverage_Seq=0.8894472361809045;Coverage_Hmm=0.555205047318612
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	51613	52485	291	+	.	ID=SEQF4401.1|RJNA01000003.1_42_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.1999999999999999e-95;Score=316.7;Coverage_Seq=0.9106529209621993;Coverage_Hmm=0.9563636363636364
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	69221	69553	111	+	.	ID=SEQF4401.1|RJNA01000003.1_60_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.7e-20;Score=68.3;Coverage_Seq=0.6756756756756757;Coverage_Hmm=0.9367088607594937
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	52502	52810	103	+	.	ID=SEQF4401.1|RJNA01000003.1_43_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3.7e-32;Score=107.9;Coverage_Seq=0.9805825242718447;Coverage_Hmm=0.8706896551724138
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	71871	72605	245	+	.	ID=SEQF4401.1|RJNA01000003.1_61_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.0000000000000001e-24;Score=84.9;Coverage_Seq=0.7510204081632653;Coverage_Hmm=0.8711340206185567
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	48027	51413	1129	+	.	ID=SEQF4401.1|RJNA01000003.1_41_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=6.600000000000001e-209;Score=693.1;Coverage_Seq=0.7378210806023029;Coverage_Hmm=0.983132530120482
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	74879	75394	172	+	.	ID=SEQF4401.1|RJNA01000003.1_63_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=1.1e-20;Score=71.6;Coverage_Seq=0.6918604651162791;Coverage_Hmm=0.9545454545454546
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	75391	76101	237	+	.	ID=SEQF4401.1|RJNA01000003.1_64_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=1.4999999999999998e-68;Score=227.7;Coverage_Seq=0.8354430379746836;Coverage_Hmm=0.9674418604651163
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	76113	77021	303	+	.	ID=SEQF4401.1|RJNA01000003.1_65_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=1.4999999999999999e-40;Score=136.2;Coverage_Seq=0.9801980198019802;Coverage_Hmm=0.9777777777777777
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	77018	78154	379	+	.	ID=SEQF4401.1|RJNA01000003.1_66_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=1.1e-34;Score=117.2;Coverage_Seq=0.783641160949868;Coverage_Hmm=0.7863013698630137
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	78151	79473	441	+	.	ID=SEQF4401.1|RJNA01000003.1_67_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csm6_3_CAS-III;coding_strand=+;E-value=2.1e-40;Score=135.7;Coverage_Seq=0.7165532879818595;Coverage_Hmm=0.8324607329842932
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	66658	67434	259	+	.	ID=SEQF4401.1|RJNA01000003.1_56_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csm6_7_CAS-III;coding_strand=+;E-value=9.5e-27;Score=90.6;Coverage_Seq=0.9420849420849421;Coverage_Hmm=0.6729222520107239
SEQF4401.1|RJNA01000003.1	CCTyper	CDS	52807	53850	348	+	.	ID=SEQF4401.1|RJNA01000003.1_44_cas;Genome_ID=SEQF4401.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=4.500000000000001e-130;Score=430.4;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0