SEQF4678.1|CP026503.1	CCTyper	repeat_region	1238673	1239148	476	+	.	ID=SEQF4678.1|CP026503.1_1;Genome_ID=SEQF4678.1;Note=Predictor:CCtyper;Start:1238673;End:1239148;Consensus_Repeat:GATCTAAACCTCATTGATCTAACAA;Number_of_Repeats:8;Repeat_Length:25.0;Average_Spacer_Length:39.4;Repeat_Identity:89.8;Spacer_Identity:46.8;Spacer_Length_Sem:1.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.352;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1238673	1238697	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT1;Parent=SEQF4678.1|CP026503.1_1;Note=TGTTCTGACTCCCATGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1238698	1238738	41	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER1;Parent=SEQF4678.1|CP026503.1_1;Note=TCATCTAAAACAGAAAACAGGTATTCCAGGCGCGATAGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1238739	1238763	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT2;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1238764	1238804	41	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER2;Parent=SEQF4678.1|CP026503.1_1;Note=TCATCTAAAACTACCTCACACCTCTATTATTTATTTCTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1238805	1238829	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT3;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1238830	1238859	30	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER3;Parent=SEQF4678.1|CP026503.1_1;Note=CGTACGTTGGTACCGCCGCAAAAGCTAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1238860	1238884	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT4;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1238885	1238925	41	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER4;Parent=SEQF4678.1|CP026503.1_1;Note=CCATCTAAAACGTCTTACGCATGTAAACGCCGTTTTCACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1238926	1238950	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT5;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1238951	1238991	41	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER5;Parent=SEQF4678.1|CP026503.1_1;Note=TCATCTAAAACCCGCGTTAATGTTGATTTTTCTAAATTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1238992	1239016	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT6;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1239017	1239057	41	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER6;Parent=SEQF4678.1|CP026503.1_1;Note=TCATCTAAAACGTTCCTAGCAGGGACAAGATTCAAGTGCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1239058	1239082	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT7;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1239083	1239123	41	+	.	ID=SEQF4678.1|CP026503.1_1_SPACER7;Parent=SEQF4678.1|CP026503.1_1;Note=TCATCTAAAACACGTAAGCACCTTTTGAATTGGAGACTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1239124	1239148	25	+	.	ID=SEQF4678.1|CP026503.1_1_REPEAT8;Parent=SEQF4678.1|CP026503.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	repeat_region	1252450	1252661	212	+	.	ID=SEQF4678.1|CP026503.1-17_3;Genome_ID=SEQF4678.1;Note=Predictor:CCtyper;Start:1252450;End:1252661;Consensus_Repeat:AGGATCACCTCCACATGTGTGGAGAATAC;Number_of_Repeats:4;Repeat_Length:28.8;Average_Spacer_Length:32.3;Repeat_Identity:86.7;Spacer_Identity:48.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.826;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1252450	1252477	28	+	.	ID=SEQF4678.1|CP026503.1-17_3_REPEAT1;Parent=SEQF4678.1|CP026503.1-17_3;Note=GGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1252478	1252509	32	+	.	ID=SEQF4678.1|CP026503.1-17_3_SPACER1;Parent=SEQF4678.1|CP026503.1-17_3;Note=TAAACGGCTGTGGCGTTGACACAGCTCAAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1252510	1252538	29	+	.	ID=SEQF4678.1|CP026503.1-17_3_REPEAT2;Parent=SEQF4678.1|CP026503.1-17_3;Note=AGGATCACCTCCACACACGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1252539	1252571	33	+	.	ID=SEQF4678.1|CP026503.1-17_3_SPACER2;Parent=SEQF4678.1|CP026503.1-17_3;Note=GCTAACTGGATACCAGTCATCACCGTTAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1252572	1252600	29	+	.	ID=SEQF4678.1|CP026503.1-17_3_REPEAT3;Parent=SEQF4678.1|CP026503.1-17_3;Note=AGGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	binding_site	1252601	1252632	32	+	.	ID=SEQF4678.1|CP026503.1-17_3_SPACER3;Parent=SEQF4678.1|CP026503.1-17_3;Note=TCTGCCTTGTCTCCCGTGCCCTTCAAGATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	direct_repeat	1252633	1252661	29	+	.	ID=SEQF4678.1|CP026503.1-17_3_REPEAT4;Parent=SEQF4678.1|CP026503.1-17_3;Note=AGGATCACCTCCACACTCGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4678.1|CP026503.1	CCTyper	OPERON	1239192	1248592	9401	-	.	ID=SEQF4678.1|CP026503.1@28;Genome_ID=SEQF4678.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II;Positions=1210,1212,1213,1214,1216,1218;E-values=1.10e-27,4.90e-34,1.20e-54,6.60e-89,9.90e-54,6.30e-109;CoverageSeq=0.952,0.952,0.99,0.888,0.976,0.962;CoverageHMM=0.361,0.63,1.0,0.996,0.249,0.708;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4678.1|CP026503.1	CCTyper	CDS	1241517	1242425	303	-	.	ID=SEQF4678.1|CP026503.1_1214_cas;Genome_ID=SEQF4678.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.600000000000001e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF4678.1|CP026503.1	CCTyper	CDS	1241234	1241539	102	-	.	ID=SEQF4678.1|CP026503.1_1213_cas;Genome_ID=SEQF4678.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1999999999999999e-54;Score=179.8;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF4678.1|CP026503.1	CCTyper	CDS	1243626	1244246	207	-	.	ID=SEQF4678.1|CP026503.1_1216_cas;Genome_ID=SEQF4678.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=9.9e-54;Score=180.0;Coverage_Seq=0.9758454106280193;Coverage_Hmm=0.2493975903614458
SEQF4678.1|CP026503.1	CCTyper	CDS	1246019	1248592	858	-	.	ID=SEQF4678.1|CP026503.1_1218_cas;Genome_ID=SEQF4678.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=6.3e-109;Score=362.6;Coverage_Seq=0.9615384615384616;Coverage_Hmm=0.708433734939759
SEQF4678.1|CP026503.1	CCTyper	CDS	1239192	1239440	83	-	.	ID=SEQF4678.1|CP026503.1_1210_cas;Genome_ID=SEQF4678.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=1.1000000000000001e-27;Score=94.2;Coverage_Seq=0.9518072289156626;Coverage_Hmm=0.3607305936073059
SEQF4678.1|CP026503.1	CCTyper	CDS	1240803	1241237	145	-	.	ID=SEQF4678.1|CP026503.1_1212_cas;Genome_ID=SEQF4678.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=4.9000000000000005e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698