SEQF4681.1|CP046311.1	CCTyper	repeat_region	1787858	1788333	476	+	.	ID=SEQF4681.1|CP046311.1_1;Genome_ID=SEQF4681.1;Note=Predictor:CCtyper;Start:1787858;End:1788333;Consensus_Repeat:GATCTAAACCTCATTGATCTAACAA;Number_of_Repeats:8;Repeat_Length:25.0;Average_Spacer_Length:39.4;Repeat_Identity:89.8;Spacer_Identity:46.8;Spacer_Length_Sem:1.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.352;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1787858	1787882	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT1;Parent=SEQF4681.1|CP046311.1_1;Note=TGTTCTGACTCCCATGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1787883	1787923	41	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER1;Parent=SEQF4681.1|CP046311.1_1;Note=TCATCTAAAACAGAAAACAGGTATTCCAGGCGCGATAGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1787924	1787948	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT2;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1787949	1787989	41	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER2;Parent=SEQF4681.1|CP046311.1_1;Note=TCATCTAAAACTACCTCACACCTCTATTATTTATTTCTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1787990	1788014	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT3;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1788015	1788044	30	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER3;Parent=SEQF4681.1|CP046311.1_1;Note=CGTACGTTGGTACCGCCGCAAAAGCTAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1788045	1788069	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT4;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1788070	1788110	41	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER4;Parent=SEQF4681.1|CP046311.1_1;Note=CCATCTAAAACGTCTTACGCATGTAAACGCCGTTTTCACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1788111	1788135	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT5;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1788136	1788176	41	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER5;Parent=SEQF4681.1|CP046311.1_1;Note=TCATCTAAAACCCGCGTTAATGTTGATTTTTCTAAATTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1788177	1788201	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT6;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1788202	1788242	41	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER6;Parent=SEQF4681.1|CP046311.1_1;Note=TCATCTAAAACGTTCCTAGCAGGGACAAGATTCAAGTGCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1788243	1788267	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT7;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1788268	1788308	41	+	.	ID=SEQF4681.1|CP046311.1_1_SPACER7;Parent=SEQF4681.1|CP046311.1_1;Note=TCATCTAAAACACGTAAGCACCTTTTGAATTGGAGACTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1788309	1788333	25	+	.	ID=SEQF4681.1|CP046311.1_1_REPEAT8;Parent=SEQF4681.1|CP046311.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	repeat_region	1801630	1801841	212	+	.	ID=SEQF4681.1|CP046311.1-25_3;Genome_ID=SEQF4681.1;Note=Predictor:CCtyper;Start:1801630;End:1801841;Consensus_Repeat:AGGATCACCTCCACATGTGTGGAGAATAC;Number_of_Repeats:4;Repeat_Length:28.8;Average_Spacer_Length:32.3;Repeat_Identity:86.7;Spacer_Identity:48.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.826;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1801630	1801657	28	+	.	ID=SEQF4681.1|CP046311.1-25_3_REPEAT1;Parent=SEQF4681.1|CP046311.1-25_3;Note=GGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1801658	1801689	32	+	.	ID=SEQF4681.1|CP046311.1-25_3_SPACER1;Parent=SEQF4681.1|CP046311.1-25_3;Note=TAAACGGCTGTGGCGTTGACACAGCTCAAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1801690	1801718	29	+	.	ID=SEQF4681.1|CP046311.1-25_3_REPEAT2;Parent=SEQF4681.1|CP046311.1-25_3;Note=AGGATCACCTCCACACACGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1801719	1801751	33	+	.	ID=SEQF4681.1|CP046311.1-25_3_SPACER2;Parent=SEQF4681.1|CP046311.1-25_3;Note=GCTAACTGGATACCAGTCATCACCGTTAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1801752	1801780	29	+	.	ID=SEQF4681.1|CP046311.1-25_3_REPEAT3;Parent=SEQF4681.1|CP046311.1-25_3;Note=AGGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	binding_site	1801781	1801812	32	+	.	ID=SEQF4681.1|CP046311.1-25_3_SPACER3;Parent=SEQF4681.1|CP046311.1-25_3;Note=TCTGCCTTGTCTCCCGTGCCCTTCAAGATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	direct_repeat	1801813	1801841	29	+	.	ID=SEQF4681.1|CP046311.1-25_3_REPEAT4;Parent=SEQF4681.1|CP046311.1-25_3;Note=AGGATCACCTCCACACTCGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4681.1|CP046311.1	CCTyper	OPERON	1788377	1797772	9396	-	.	ID=SEQF4681.1|CP046311.1@40;Genome_ID=SEQF4681.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II;Positions=1773,1775,1776,1777,1779,1781;E-values=1.10e-27,4.90e-34,1.30e-54,6.70e-89,4.20e-25,6.30e-109;CoverageSeq=0.952,0.952,0.981,0.888,0.965,0.962;CoverageHMM=0.361,0.63,1.0,0.996,0.127,0.708;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4681.1|CP046311.1	CCTyper	CDS	1790702	1791610	303	-	.	ID=SEQF4681.1|CP046311.1_1777_cas;Genome_ID=SEQF4681.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.7e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF4681.1|CP046311.1	CCTyper	CDS	1790419	1790727	103	-	.	ID=SEQF4681.1|CP046311.1_1776_cas;Genome_ID=SEQF4681.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3e-54;Score=179.8;Coverage_Seq=0.9805825242718447;Coverage_Hmm=1.0
SEQF4681.1|CP046311.1	CCTyper	CDS	1793093	1793431	113	-	.	ID=SEQF4681.1|CP046311.1_1779_cas;Genome_ID=SEQF4681.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=4.2e-25;Score=85.4;Coverage_Seq=0.9646017699115044;Coverage_Hmm=0.12650602409638553
SEQF4681.1|CP046311.1	CCTyper	CDS	1795199	1797772	858	-	.	ID=SEQF4681.1|CP046311.1_1781_cas;Genome_ID=SEQF4681.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=6.3e-109;Score=362.6;Coverage_Seq=0.9615384615384616;Coverage_Hmm=0.708433734939759
SEQF4681.1|CP046311.1	CCTyper	CDS	1788377	1788625	83	-	.	ID=SEQF4681.1|CP046311.1_1773_cas;Genome_ID=SEQF4681.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=1.1000000000000001e-27;Score=94.2;Coverage_Seq=0.9518072289156626;Coverage_Hmm=0.3607305936073059
SEQF4681.1|CP046311.1	CCTyper	CDS	1789988	1790422	145	-	.	ID=SEQF4681.1|CP046311.1_1775_cas;Genome_ID=SEQF4681.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=4.9000000000000005e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698