SEQF4683.3|CP079206.1	CCTyper	repeat_region	1381507	1381982	476	+	.	ID=SEQF4683.3|CP079206.1_1;Genome_ID=SEQF4683.3;Note=Predictor:CCtyper;Start:1381507;End:1381982;Consensus_Repeat:GATCTAAACCTCATTGATCTAACAA;Number_of_Repeats:8;Repeat_Length:25.0;Average_Spacer_Length:39.4;Repeat_Identity:89.8;Spacer_Identity:46.8;Spacer_Length_Sem:1.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.352;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381507	1381531	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT1;Parent=SEQF4683.3|CP079206.1_1;Note=TGTTCTGACTCCCATGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381532	1381572	41	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER1;Parent=SEQF4683.3|CP079206.1_1;Note=TCATCTAAAACAGAAAACAGGTATTCCAGGCGCGATAGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381573	1381597	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT2;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381598	1381638	41	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER2;Parent=SEQF4683.3|CP079206.1_1;Note=TCATCTAAAACTACCTCACACCTCTATTATTTATTTCTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381639	1381663	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT3;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381664	1381693	30	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER3;Parent=SEQF4683.3|CP079206.1_1;Note=CGTACGTTGGTACCGCCGCAAAAGCTAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381694	1381718	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT4;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381719	1381759	41	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER4;Parent=SEQF4683.3|CP079206.1_1;Note=CCATCTAAAACGTCTTACGCATGTAAACGCCGTTTTCACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381760	1381784	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT5;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381785	1381825	41	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER5;Parent=SEQF4683.3|CP079206.1_1;Note=TCATCTAAAACCCGCGTTAATGTTGATTTTTCTAAATTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381826	1381850	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT6;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381851	1381891	41	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER6;Parent=SEQF4683.3|CP079206.1_1;Note=TCATCTAAAACGTTCCTAGCAGGGACAAGATTCAAGTGCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381892	1381916	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT7;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1381917	1381957	41	+	.	ID=SEQF4683.3|CP079206.1_1_SPACER7;Parent=SEQF4683.3|CP079206.1_1;Note=TCATCTAAAACACGTAAGCACCTTTTGAATTGGAGACTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1381958	1381982	25	+	.	ID=SEQF4683.3|CP079206.1_1_REPEAT8;Parent=SEQF4683.3|CP079206.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	repeat_region	1395279	1395490	212	+	.	ID=SEQF4683.3|CP079206.1-15_3;Genome_ID=SEQF4683.3;Note=Predictor:CCtyper;Start:1395279;End:1395490;Consensus_Repeat:AGGATCACCTCCACACTCGTGGAGAATAC;Number_of_Repeats:4;Repeat_Length:28.8;Average_Spacer_Length:32.3;Repeat_Identity:86.7;Spacer_Identity:48.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.766;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1395279	1395306	28	+	.	ID=SEQF4683.3|CP079206.1-15_3_REPEAT1;Parent=SEQF4683.3|CP079206.1-15_3;Note=GGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1395307	1395338	32	+	.	ID=SEQF4683.3|CP079206.1-15_3_SPACER1;Parent=SEQF4683.3|CP079206.1-15_3;Note=TAAACGGCTGTGGCGTTGACACAGCTCAAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1395339	1395367	29	+	.	ID=SEQF4683.3|CP079206.1-15_3_REPEAT2;Parent=SEQF4683.3|CP079206.1-15_3;Note=AGGATCACCTCCACACACGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1395368	1395400	33	+	.	ID=SEQF4683.3|CP079206.1-15_3_SPACER2;Parent=SEQF4683.3|CP079206.1-15_3;Note=GCTAACTGGATACCAGTCATCACCGTTAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1395401	1395429	29	+	.	ID=SEQF4683.3|CP079206.1-15_3_REPEAT3;Parent=SEQF4683.3|CP079206.1-15_3;Note=AGGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	binding_site	1395430	1395461	32	+	.	ID=SEQF4683.3|CP079206.1-15_3_SPACER3;Parent=SEQF4683.3|CP079206.1-15_3;Note=TCTGCCTTGTCTCCCGTGCCCTTCAAGATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	direct_repeat	1395462	1395490	29	+	.	ID=SEQF4683.3|CP079206.1-15_3_REPEAT4;Parent=SEQF4683.3|CP079206.1-15_3;Note=AGGATCACCTCCACACTCGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4683.3|CP079206.1	CCTyper	OPERON	1382026	1391421	9396	-	.	ID=SEQF4683.3|CP079206.1@22;Genome_ID=SEQF4683.3;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II;Positions=1359,1361,1362,1363,1365,1367;E-values=1.20e-27,5.30e-34,1.30e-54,7.10e-89,1.10e-53,6.80e-109;CoverageSeq=0.952,0.952,0.99,0.888,0.976,0.962;CoverageHMM=0.361,0.63,1.0,0.996,0.249,0.708;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4683.3|CP079206.1	CCTyper	CDS	1384351	1385259	303	-	.	ID=SEQF4683.3|CP079206.1_1363_cas;Genome_ID=SEQF4683.3;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.1e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF4683.3|CP079206.1	CCTyper	CDS	1384068	1384373	102	-	.	ID=SEQF4683.3|CP079206.1_1362_cas;Genome_ID=SEQF4683.3;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.3e-54;Score=179.8;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF4683.3|CP079206.1	CCTyper	CDS	1386460	1387080	207	-	.	ID=SEQF4683.3|CP079206.1_1365_cas;Genome_ID=SEQF4683.3;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.0999999999999999e-53;Score=180.0;Coverage_Seq=0.9758454106280193;Coverage_Hmm=0.2493975903614458
SEQF4683.3|CP079206.1	CCTyper	CDS	1388848	1391421	858	-	.	ID=SEQF4683.3|CP079206.1_1367_cas;Genome_ID=SEQF4683.3;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=6.8e-109;Score=362.6;Coverage_Seq=0.9615384615384616;Coverage_Hmm=0.708433734939759
SEQF4683.3|CP079206.1	CCTyper	CDS	1382026	1382274	83	-	.	ID=SEQF4683.3|CP079206.1_1359_cas;Genome_ID=SEQF4683.3;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=1.2e-27;Score=94.2;Coverage_Seq=0.9518072289156626;Coverage_Hmm=0.3607305936073059
SEQF4683.3|CP079206.1	CCTyper	CDS	1383637	1384071	145	-	.	ID=SEQF4683.3|CP079206.1_1361_cas;Genome_ID=SEQF4683.3;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=5.3000000000000005e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698