SEQF4684.1|CP058996.1	CCTyper	repeat_region	1122731	1123030	300	+	.	ID=SEQF4684.1|CP058996.1_1;Genome_ID=SEQF4684.1;Note=Predictor:CCtyper;Start:1122731;End:1123030;Consensus_Repeat:GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Number_of_Repeats:5;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:90.2;Spacer_Identity:41.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.993;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1122731	1122766	36	+	.	ID=SEQF4684.1|CP058996.1_1_REPEAT1;Parent=SEQF4684.1|CP058996.1_1;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1122767	1122796	30	+	.	ID=SEQF4684.1|CP058996.1_1_SPACER1;Parent=SEQF4684.1|CP058996.1_1;Note=TAGAAGATGGTACAAATAAACCATTTTCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1122797	1122832	36	+	.	ID=SEQF4684.1|CP058996.1_1_REPEAT2;Parent=SEQF4684.1|CP058996.1_1;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1122833	1122862	30	+	.	ID=SEQF4684.1|CP058996.1_1_SPACER2;Parent=SEQF4684.1|CP058996.1_1;Note=AAATGCTTTTCACGATGGACCGGATTTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1122863	1122898	36	+	.	ID=SEQF4684.1|CP058996.1_1_REPEAT3;Parent=SEQF4684.1|CP058996.1_1;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1122899	1122928	30	+	.	ID=SEQF4684.1|CP058996.1_1_SPACER3;Parent=SEQF4684.1|CP058996.1_1;Note=AATGGGCGACTTCTTTTATTGTTGGGAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1122929	1122964	36	+	.	ID=SEQF4684.1|CP058996.1_1_REPEAT4;Parent=SEQF4684.1|CP058996.1_1;Note=GTTTTAGATGATTGTTAGATCAATGAGGTTTAGATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1122965	1122994	30	+	.	ID=SEQF4684.1|CP058996.1_1_SPACER4;Parent=SEQF4684.1|CP058996.1_1;Note=CCACTATTGCGCCTGGAATACCTGTTTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1122995	1123030	36	+	.	ID=SEQF4684.1|CP058996.1_1_REPEAT5;Parent=SEQF4684.1|CP058996.1_1;Note=GTTTTAGATGATTGTTAGATCATGGGAGTCAGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	repeat_region	1071287	1071498	212	+	.	ID=SEQF4684.1|CP058996.1-16_2;Genome_ID=SEQF4684.1;Note=Predictor:CCtyper;Start:1071287;End:1071498;Consensus_Repeat:GTATTCTCCACGAGTGTGGAGGTGATCCT;Number_of_Repeats:4;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:88.3;Spacer_Identity:46.6;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.766;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1071287	1071315	29	+	.	ID=SEQF4684.1|CP058996.1-16_2_REPEAT1;Parent=SEQF4684.1|CP058996.1-16_2;Note=GTATTCTCCACGAGTGTGGAGGTGATCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1071316	1071346	31	+	.	ID=SEQF4684.1|CP058996.1-16_2_SPACER1;Parent=SEQF4684.1|CP058996.1-16_2;Note=ATCATCTTGAAGGGCACGGGAGACAAGGCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1071347	1071376	30	+	.	ID=SEQF4684.1|CP058996.1-16_2_REPEAT2;Parent=SEQF4684.1|CP058996.1-16_2;Note=AGTATTCTCCACGTATGTGGAGGTGATCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1071377	1071409	33	+	.	ID=SEQF4684.1|CP058996.1-16_2_SPACER2;Parent=SEQF4684.1|CP058996.1-16_2;Note=ACTGTTAACGGTGATGACTGGTATCCAGTTAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1071410	1071438	29	+	.	ID=SEQF4684.1|CP058996.1-16_2_REPEAT3;Parent=SEQF4684.1|CP058996.1-16_2;Note=GTATTCTCCACGAGTGTGGAGGTGATCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	binding_site	1071439	1071470	32	+	.	ID=SEQF4684.1|CP058996.1-16_2_SPACER3;Parent=SEQF4684.1|CP058996.1-16_2;Note=ACTTTGAGCTGTGTCAACGCCACAGCCGTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	direct_repeat	1071471	1071498	28	+	.	ID=SEQF4684.1|CP058996.1-16_2_REPEAT4;Parent=SEQF4684.1|CP058996.1-16_2;Note=GTATTCTCCACACATGTGGAGGTGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4684.1|CP058996.1	CCTyper	OPERON	1114858	1122698	7841	+	.	ID=SEQF4684.1|CP058996.1@25;Genome_ID=SEQF4684.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_9_CAS-I-II-III-IV-V-VI,Csn2_3_CAS-II-A,Csn2_3_CAS-II-A;Positions=1126,1128,1130,1131,1132,1134;E-values=4.00e-33,3.30e-53,6.70e-89,1.30e-54,4.90e-34,1.10e-27;CoverageSeq=0.968,0.603,0.888,0.981,0.952,0.952;CoverageHMM=0.339,0.378,0.996,1.0,0.63,0.361;Strand_Interference=1;Strand_Adaptation=1
SEQF4684.1|CP058996.1	CCTyper	CDS	1119465	1120373	303	+	.	ID=SEQF4684.1|CP058996.1_1130_cas;Genome_ID=SEQF4684.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.7e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF4684.1|CP058996.1	CCTyper	CDS	1120348	1120656	103	+	.	ID=SEQF4684.1|CP058996.1_1131_cas;Genome_ID=SEQF4684.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-54;Score=179.8;Coverage_Seq=0.9805825242718447;Coverage_Hmm=1.0
SEQF4684.1|CP058996.1	CCTyper	CDS	1114858	1115706	283	+	.	ID=SEQF4684.1|CP058996.1_1126_cas;Genome_ID=SEQF4684.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=4e-33;Score=111.9;Coverage_Seq=0.9681978798586572;Coverage_Hmm=0.3385542168674699
SEQF4684.1|CP058996.1	CCTyper	CDS	1116672	1118288	539	+	.	ID=SEQF4684.1|CP058996.1_1128_cas;Genome_ID=SEQF4684.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=3.2999999999999996e-53;Score=178.3;Coverage_Seq=0.6029684601113172;Coverage_Hmm=0.3783132530120482
SEQF4684.1|CP058996.1	CCTyper	CDS	1120653	1121087	145	+	.	ID=SEQF4684.1|CP058996.1_1132_cas;Genome_ID=SEQF4684.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=+;E-value=4.9000000000000005e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698
SEQF4684.1|CP058996.1	CCTyper	CDS	1122450	1122698	83	+	.	ID=SEQF4684.1|CP058996.1_1134_cas;Genome_ID=SEQF4684.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=+;E-value=1.1000000000000001e-27;Score=94.2;Coverage_Seq=0.9518072289156626;Coverage_Hmm=0.3607305936073059