SEQF4685.1|CP061006.1	CCTyper	repeat_region	1227729	1228204	476	+	.	ID=SEQF4685.1|CP061006.1_1;Genome_ID=SEQF4685.1;Note=Predictor:CCtyper;Start:1227729;End:1228204;Consensus_Repeat:GATCTAAACCTCATTGATCTAACAA;Number_of_Repeats:8;Repeat_Length:25.0;Average_Spacer_Length:39.4;Repeat_Identity:89.8;Spacer_Identity:46.8;Spacer_Length_Sem:1.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.352;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1227729	1227753	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT1;Parent=SEQF4685.1|CP061006.1_1;Note=TGTTCTGACTCCCATGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1227754	1227794	41	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER1;Parent=SEQF4685.1|CP061006.1_1;Note=TCATCTAAAACAGAAAACAGGTATTCCAGGCGCGATAGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1227795	1227819	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT2;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1227820	1227860	41	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER2;Parent=SEQF4685.1|CP061006.1_1;Note=TCATCTAAAACTACCTCACACCTCTATTATTTATTTCTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1227861	1227885	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT3;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1227886	1227915	30	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER3;Parent=SEQF4685.1|CP061006.1_1;Note=CGTACGTTGGTACCGCCGCAAAAGCTAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1227916	1227940	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT4;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1227941	1227981	41	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER4;Parent=SEQF4685.1|CP061006.1_1;Note=CCATCTAAAACGTCTTACGCATGTAAACGCCGTTTTCACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1227982	1228006	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT5;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1228007	1228047	41	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER5;Parent=SEQF4685.1|CP061006.1_1;Note=TCATCTAAAACCCGCGTTAATGTTGATTTTTCTAAATTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1228048	1228072	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT6;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1228073	1228113	41	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER6;Parent=SEQF4685.1|CP061006.1_1;Note=TCATCTAAAACGTTCCTAGCAGGGACAAGATTCAAGTGCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1228114	1228138	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT7;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1228139	1228179	41	+	.	ID=SEQF4685.1|CP061006.1_1_SPACER7;Parent=SEQF4685.1|CP061006.1_1;Note=TCATCTAAAACACGTAAGCACCTTTTGAATTGGAGACTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1228180	1228204	25	+	.	ID=SEQF4685.1|CP061006.1_1_REPEAT8;Parent=SEQF4685.1|CP061006.1_1;Note=GATCTAAACCTCATTGATCTAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	repeat_region	1241506	1241717	212	+	.	ID=SEQF4685.1|CP061006.1-16_3;Genome_ID=SEQF4685.1;Note=Predictor:CCtyper;Start:1241506;End:1241717;Consensus_Repeat:GGATCACCTCCACATGTGTGGAGAATAC;Number_of_Repeats:4;Repeat_Length:28.8;Average_Spacer_Length:32.3;Repeat_Identity:86.7;Spacer_Identity:48.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.794;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1241506	1241533	28	+	.	ID=SEQF4685.1|CP061006.1-16_3_REPEAT1;Parent=SEQF4685.1|CP061006.1-16_3;Note=GGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1241534	1241565	32	+	.	ID=SEQF4685.1|CP061006.1-16_3_SPACER1;Parent=SEQF4685.1|CP061006.1-16_3;Note=TAAACGGCTGTGGCGTTGACACAGCTCAAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1241566	1241594	29	+	.	ID=SEQF4685.1|CP061006.1-16_3_REPEAT2;Parent=SEQF4685.1|CP061006.1-16_3;Note=AGGATCACCTCCACACACGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1241595	1241627	33	+	.	ID=SEQF4685.1|CP061006.1-16_3_SPACER2;Parent=SEQF4685.1|CP061006.1-16_3;Note=GCTAACTGGATACCAGTCATCACCGTTAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1241628	1241656	29	+	.	ID=SEQF4685.1|CP061006.1-16_3_REPEAT3;Parent=SEQF4685.1|CP061006.1-16_3;Note=AGGATCACCTCCACATGTGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	binding_site	1241657	1241688	32	+	.	ID=SEQF4685.1|CP061006.1-16_3_SPACER3;Parent=SEQF4685.1|CP061006.1-16_3;Note=TCTGCCTTGTCTCCCGTGCCCTTCAAGATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	direct_repeat	1241689	1241717	29	+	.	ID=SEQF4685.1|CP061006.1-16_3_REPEAT4;Parent=SEQF4685.1|CP061006.1-16_3;Note=AGGATCACCTCCACACTCGTGGAGAATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4685.1|CP061006.1	CCTyper	OPERON	1228248	1237648	9401	-	.	ID=SEQF4685.1|CP061006.1@26;Genome_ID=SEQF4685.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,Cas9_0_II;Positions=1200,1202,1203,1204,1206,1208;E-values=1.10e-27,4.80e-34,1.20e-54,6.40e-89,9.60e-54,6.10e-109;CoverageSeq=0.952,0.952,0.981,0.888,0.976,0.962;CoverageHMM=0.361,0.63,1.0,0.996,0.249,0.708;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4685.1|CP061006.1	CCTyper	CDS	1230573	1231481	303	-	.	ID=SEQF4685.1|CP061006.1_1204_cas;Genome_ID=SEQF4685.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.4e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF4685.1|CP061006.1	CCTyper	CDS	1230290	1230598	103	-	.	ID=SEQF4685.1|CP061006.1_1203_cas;Genome_ID=SEQF4685.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1999999999999999e-54;Score=179.8;Coverage_Seq=0.9805825242718447;Coverage_Hmm=1.0
SEQF4685.1|CP061006.1	CCTyper	CDS	1232682	1233302	207	-	.	ID=SEQF4685.1|CP061006.1_1206_cas;Genome_ID=SEQF4685.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=9.599999999999999e-54;Score=180.0;Coverage_Seq=0.9758454106280193;Coverage_Hmm=0.2493975903614458
SEQF4685.1|CP061006.1	CCTyper	CDS	1235075	1237648	858	-	.	ID=SEQF4685.1|CP061006.1_1208_cas;Genome_ID=SEQF4685.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=6.1e-109;Score=362.6;Coverage_Seq=0.9615384615384616;Coverage_Hmm=0.708433734939759
SEQF4685.1|CP061006.1	CCTyper	CDS	1228248	1228496	83	-	.	ID=SEQF4685.1|CP061006.1_1200_cas;Genome_ID=SEQF4685.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=1.1000000000000001e-27;Score=94.2;Coverage_Seq=0.9518072289156626;Coverage_Hmm=0.3607305936073059
SEQF4685.1|CP061006.1	CCTyper	CDS	1229859	1230293	145	-	.	ID=SEQF4685.1|CP061006.1_1202_cas;Genome_ID=SEQF4685.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=4.8e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698