SEQF4721.1|LJON01000065.1	CCTyper	repeat_region	489	968	480	+	.	ID=SEQF4721.1|LJON01000065.1_1;Genome_ID=SEQF4721.1;Note=Predictor:CCtyper;Start:489;End:968;Consensus_Repeat:TTTTAGATGATTGTTAGATCAATGAGGTT;Number_of_Repeats:8;Repeat_Length:29;Average_Spacer_Length:35.4;Repeat_Identity:84.7;Spacer_Identity:45.5;Spacer_Length_Sem:1.6;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-B;Subtype_Probability:0.197;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	489	517	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT1;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGATTGTTAGATCAATGAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	518	554	37	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER1;Parent=SEQF4721.1|LJON01000065.1_1;Note=TAGATCAGTAGTCTCCAATTCAAAAGGTGCTTACGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	555	583	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT2;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGATTGTTAGATCAATGAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	584	620	37	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER2;Parent=SEQF4721.1|LJON01000065.1_1;Note=TAGATCAAGCACTTGAATCTTGTCCCTGCTAGGAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	621	649	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT3;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGATTGTTAGATCAATGAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	650	686	37	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER3;Parent=SEQF4721.1|LJON01000065.1_1;Note=TAGATCTCGAATTTAGAAAAATCAACATTAACGCGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	687	715	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT4;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGATTGTTAGATCAATGAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	716	752	37	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER4;Parent=SEQF4721.1|LJON01000065.1_1;Note=TAGATCCCGTGAAAACGGCGTTTACATGCGTAAGACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	753	781	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT5;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGGTTGTTAGATCAATGAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	782	818	37	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER5;Parent=SEQF4721.1|LJON01000065.1_1;Note=TAGATCTATTAGCTTTTGCGGCGGTACCAACGTACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	819	847	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT6;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATCAATGAGGTTTAGATCTAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	848	873	26	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER6;Parent=SEQF4721.1|LJON01000065.1_1;Note=AAATAAATAATAGAGGTGTGAGGTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	874	902	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT7;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGATTGTTAGATCAATGAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	binding_site	903	939	37	+	.	ID=SEQF4721.1|LJON01000065.1_1_SPACER7;Parent=SEQF4721.1|LJON01000065.1_1;Note=TAGATCCCACTATCGCGCCTGGAATACCTGTTTTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000065.1	CCTyper	direct_repeat	940	968	29	+	.	ID=SEQF4721.1|LJON01000065.1_1_REPEAT8;Parent=SEQF4721.1|LJON01000065.1_1;Note=TTTTAGATGATTGTTAGATCATGGGAGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4721.1|LJON01000233.1	CCTyper	OPERON	3	3464	3462	+	.	ID=SEQF4721.1|LJON01000233.1@1;Genome_ID=SEQF4721.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_9_CAS-I-II-III-IV-V-VI,Csn2_3_CAS-II-A;Positions=1,3,4,5;E-values=8.50e-54,6.90e-89,1.30e-54,5.10e-34;CoverageSeq=0.953,0.888,0.99,0.952;CoverageHMM=0.251,0.996,1.0,0.63;Strand_Interference=1;Strand_Adaptation=1
SEQF4721.1|LJON01000233.1	CCTyper	CDS	1842	2750	303	+	.	ID=SEQF4721.1|LJON01000233.1_3_cas;Genome_ID=SEQF4721.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.9e-89;Score=294.8;Coverage_Seq=0.8877887788778878;Coverage_Hmm=0.9963636363636363
SEQF4721.1|LJON01000233.1	CCTyper	CDS	2728	3033	102	+	.	ID=SEQF4721.1|LJON01000233.1_4_cas;Genome_ID=SEQF4721.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.3e-54;Score=179.8;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF4721.1|LJON01000233.1	CCTyper	CDS	3	641	213	+	.	ID=SEQF4721.1|LJON01000233.1_1_cas;Genome_ID=SEQF4721.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=8.5e-54;Score=180.3;Coverage_Seq=0.9530516431924883;Coverage_Hmm=0.25060240963855424
SEQF4721.1|LJON01000233.1	CCTyper	CDS	3030	3464	145	+	.	ID=SEQF4721.1|LJON01000233.1_5_cas;Genome_ID=SEQF4721.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=+;E-value=5.1e-34;Score=115.0;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.6301369863013698