SEQF4824.1|JMSR01000174.1	CCTyper	repeat_region	56	265	210	+	.	ID=SEQF4824.1|JMSR01000174.1_1;Genome_ID=SEQF4824.1;Note=Predictor:CCtyper;Start:56;End:265;Consensus_Repeat:GTTCCCCGCGCGAGCGGGGATAAACCG;Number_of_Repeats:4;Repeat_Length:27;Average_Spacer_Length:34;Repeat_Identity:79.4;Spacer_Identity:42.7;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	direct_repeat	56	82	27	+	.	ID=SEQF4824.1|JMSR01000174.1_1_REPEAT1;Parent=SEQF4824.1|JMSR01000174.1_1;Note=GTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	binding_site	83	116	34	+	.	ID=SEQF4824.1|JMSR01000174.1_1_SPACER1;Parent=SEQF4824.1|JMSR01000174.1_1;Note=GCTTATATCCTCTCCTGCCTGATTGCCTCCGGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	direct_repeat	117	143	27	+	.	ID=SEQF4824.1|JMSR01000174.1_1_REPEAT2;Parent=SEQF4824.1|JMSR01000174.1_1;Note=GTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	binding_site	144	177	34	+	.	ID=SEQF4824.1|JMSR01000174.1_1_SPACER2;Parent=SEQF4824.1|JMSR01000174.1_1;Note=CTCTGGCCCATCATGACGGACTCATCCTGCGTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	direct_repeat	178	204	27	+	.	ID=SEQF4824.1|JMSR01000174.1_1_REPEAT3;Parent=SEQF4824.1|JMSR01000174.1_1;Note=GTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	binding_site	205	238	34	+	.	ID=SEQF4824.1|JMSR01000174.1_1_SPACER3;Parent=SEQF4824.1|JMSR01000174.1_1;Note=ACCGCTATCCAGTGGGGGATTTACAGCCCTAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000174.1	CCTyper	direct_repeat	239	265	27	+	.	ID=SEQF4824.1|JMSR01000174.1_1_REPEAT4;Parent=SEQF4824.1|JMSR01000174.1_1;Note=GTTCCCCGCGCGAGCGGGGANNNNNNN;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	repeat_region	90933	91205	273	+	.	ID=SEQF4824.1|JMSR01000175.1_2;Genome_ID=SEQF4824.1;Note=Predictor:CCtyper;Start:90933;End:91205;Consensus_Repeat:CTGTTCCCCGCGCGAGCGGGGATAAACCG;Number_of_Repeats:5;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:100.0;Spacer_Identity:40.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	direct_repeat	90933	90961	29	+	.	ID=SEQF4824.1|JMSR01000175.1_2_REPEAT1;Parent=SEQF4824.1|JMSR01000175.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	binding_site	90962	90993	32	+	.	ID=SEQF4824.1|JMSR01000175.1_2_SPACER1;Parent=SEQF4824.1|JMSR01000175.1_2;Note=TACTCCTTCTAGTGCCGATGCCGGCAATTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	direct_repeat	90994	91022	29	+	.	ID=SEQF4824.1|JMSR01000175.1_2_REPEAT2;Parent=SEQF4824.1|JMSR01000175.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	binding_site	91023	91054	32	+	.	ID=SEQF4824.1|JMSR01000175.1_2_SPACER2;Parent=SEQF4824.1|JMSR01000175.1_2;Note=CGTTCAGAGGCGGTAACAGTGGTGGTCAGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	direct_repeat	91055	91083	29	+	.	ID=SEQF4824.1|JMSR01000175.1_2_REPEAT3;Parent=SEQF4824.1|JMSR01000175.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	binding_site	91084	91115	32	+	.	ID=SEQF4824.1|JMSR01000175.1_2_SPACER3;Parent=SEQF4824.1|JMSR01000175.1_2;Note=TGCCGATACCGGCAATTTTTCGGGCGGCGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	direct_repeat	91116	91144	29	+	.	ID=SEQF4824.1|JMSR01000175.1_2_REPEAT4;Parent=SEQF4824.1|JMSR01000175.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	binding_site	91145	91176	32	+	.	ID=SEQF4824.1|JMSR01000175.1_2_SPACER4;Parent=SEQF4824.1|JMSR01000175.1_2;Note=ACGCCACAGAGTCTATTATCAACGCACTGGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000175.1	CCTyper	direct_repeat	91177	91205	29	+	.	ID=SEQF4824.1|JMSR01000175.1_2_REPEAT5;Parent=SEQF4824.1|JMSR01000175.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	repeat_region	271	665	395	+	.	ID=SEQF4824.1|JMSR01000406.1_3;Genome_ID=SEQF4824.1;Note=Predictor:CCtyper;Start:271;End:665;Consensus_Repeat:CGGCTTATCCCCGCTCGTGCGGGGAACAC;Number_of_Repeats:7;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:90.8;Spacer_Identity:39.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.421;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	271	299	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT1;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGTTTATCCCCGCTCCCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	binding_site	300	331	32	+	.	ID=SEQF4824.1|JMSR01000406.1_3_SPACER1;Parent=SEQF4824.1|JMSR01000406.1_3;Note=TTTCTGCGGGACAGCTCAACAACAATATCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	332	360	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT2;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGTTTATCCCCGCTCGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	binding_site	361	392	32	+	.	ID=SEQF4824.1|JMSR01000406.1_3_SPACER2;Parent=SEQF4824.1|JMSR01000406.1_3;Note=TGGCGCAATACACACTCGGCGACCTGCGCACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	393	421	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT3;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGTTTATCCCCGCTCGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	binding_site	422	453	32	+	.	ID=SEQF4824.1|JMSR01000406.1_3_SPACER3;Parent=SEQF4824.1|JMSR01000406.1_3;Note=TTGGCTACCGCGCTGATTGCCTGATAAACAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	454	482	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT4;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGTTTATCCCCGCTCGTGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	binding_site	483	514	32	+	.	ID=SEQF4824.1|JMSR01000406.1_3_SPACER4;Parent=SEQF4824.1|JMSR01000406.1_3;Note=TTAAAAAGAACAAACACGGATTTTTACCCAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	515	543	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT5;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGCTTATCCCCGCTCGTGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	binding_site	544	575	32	+	.	ID=SEQF4824.1|JMSR01000406.1_3_SPACER5;Parent=SEQF4824.1|JMSR01000406.1_3;Note=GCGCCGGTCTGGAAAATATTCCCGCCCTCCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	576	604	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT6;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGCTTATCCCCGCTCGTGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	binding_site	605	636	32	+	.	ID=SEQF4824.1|JMSR01000406.1_3_SPACER6;Parent=SEQF4824.1|JMSR01000406.1_3;Note=AAACAACCCCATTTCGCAGGTCACCACCCTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	direct_repeat	637	665	29	+	.	ID=SEQF4824.1|JMSR01000406.1_3_REPEAT7;Parent=SEQF4824.1|JMSR01000406.1_3;Note=CGGCTTATCCCCGCTCGTGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4824.1|JMSR01000406.1	CCTyper	OPERON	762	9634	8873	-	.	ID=SEQF4824.1|JMSR01000406.1@1;Genome_ID=SEQF4824.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=Cas2_1_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6_0_IE,Cas5_0_CAS-I-E,Cas7_0_IE,Cse2gr11_1_CAS-I-E,Cse1_0_IE,Cas3_1_CAS-I;Positions=1,3,4,5,6,7,8,9;E-values=7.80e-39,6.00e-79,2.60e-63,5.90e-56,3.10e-108,9.10e-32,7.60e-147,2.10e-114;CoverageSeq=0.929,0.81,0.977,0.693,0.913,0.748,0.96,0.813;CoverageHMM=1.0,0.703,0.995,0.945,1.0,0.986,0.986,0.93;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	1302	1997	232	-	.	ID=SEQF4824.1|JMSR01000406.1_3_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=6e-79;Score=263.1;Coverage_Seq=0.8103448275862069;Coverage_Hmm=0.7026022304832714
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	762	1055	98	-	.	ID=SEQF4824.1|JMSR01000406.1_1_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.799999999999999e-39;Score=129.8;Coverage_Seq=0.9285714285714286;Coverage_Hmm=1.0
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	7001	9634	878	-	.	ID=SEQF4824.1|JMSR01000406.1_9_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=2.1e-114;Score=381.5;Coverage_Seq=0.8132118451025057;Coverage_Hmm=0.9302013422818792
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	2626	3378	251	-	.	ID=SEQF4824.1|JMSR01000406.1_5_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=-;E-value=5.9e-56;Score=187.2;Coverage_Seq=0.6932270916334662;Coverage_Hmm=0.945054945054945
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	1994	2644	217	-	.	ID=SEQF4824.1|JMSR01000406.1_4_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_IE;coding_strand=-;E-value=2.6e-63;Score=212.2;Coverage_Seq=0.9769585253456221;Coverage_Hmm=0.9951923076923077
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	3388	4461	358	-	.	ID=SEQF4824.1|JMSR01000406.1_6_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IE;coding_strand=-;E-value=3.1e-108;Score=360.6;Coverage_Seq=0.9134078212290503;Coverage_Hmm=1.0
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	5079	6647	523	-	.	ID=SEQF4824.1|JMSR01000406.1_8_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cse1_0_IE;coding_strand=-;E-value=7.599999999999999e-147;Score=488.2;Coverage_Seq=0.9598470363288719;Coverage_Hmm=0.9861111111111112
SEQF4824.1|JMSR01000406.1	CCTyper	CDS	4473	5078	202	-	.	ID=SEQF4824.1|JMSR01000406.1_7_cas;Genome_ID=SEQF4824.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_1_CAS-I-E;coding_strand=-;E-value=9.100000000000001e-32;Score=108.3;Coverage_Seq=0.7475247524752475;Coverage_Hmm=0.986013986013986