SEQF4840.1|JAGFJW010000004.1	CCTyper	repeat_region	342633	342841	209	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1;Genome_ID=SEQF4840.1;Note=Predictor:CCtyper;Start:342633;End:342841;Consensus_Repeat:GTTCACTGCCGTACAGGCAGCTTAGAAA;Number_of_Repeats:4;Repeat_Length:28.0;Average_Spacer_Length:32.3;Repeat_Identity:90.3;Spacer_Identity:46.0;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: I-F;Cas_Subtype_Prediction:I-F;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	direct_repeat	342633	342660	28	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_REPEAT1;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=GTTCACTGCCGTACAGGCAGCTTAGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	binding_site	342661	342692	32	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_SPACER1;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=ATTAGCAACCGCTTGCACGAATGGCAGGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	direct_repeat	342693	342720	28	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_REPEAT2;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=GTTCACTGCCGTACAGGCAGCTTAGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	binding_site	342721	342752	32	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_SPACER2;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=TCCGCGCGCACGTTTGAGCAGACGCAGCGGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	direct_repeat	342753	342780	28	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_REPEAT3;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=GTTCACTGCCGTACAGGCAGCTTAGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	binding_site	342781	342813	33	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_SPACER3;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=AGACGCGCCGGAAGGGGAGTTGGTGCGCCAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000004.1	CCTyper	direct_repeat	342814	342841	28	+	.	ID=SEQF4840.1|JAGFJW010000004.1_1_REPEAT4;Parent=SEQF4840.1|JAGFJW010000004.1_1;Note=GTTCACTGCCGTACAGGCAGCCGGGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	repeat_region	178850	179427	578	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2;Genome_ID=SEQF4840.1;Note=Predictor:CCtyper;Start:178850;End:179427;Consensus_Repeat:CTGTTCCCCGCGCGAGCGGGGATAAACCG;Number_of_Repeats:10;Repeat_Length:29.0;Average_Spacer_Length:32.0;Repeat_Identity:97.3;Spacer_Identity:41.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	178850	178878	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT1;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	178879	178910	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER1;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=GCGTCACTGTTCATTTTGTACAATCCGCTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	178911	178939	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT2;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	178940	178971	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER2;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=GCAGCCGTGGCTAAAGACACTCAGCAGGCATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	178972	179000	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT3;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179001	179032	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER3;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=GCAAATGCAGTTTGCTCAACTTGGACTGAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179033	179061	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT4;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179062	179093	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER4;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=ATCATTACTGTGCTATGAATGAATTCTTACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179094	179122	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT5;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179123	179154	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER5;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=GCAGCAAACCATAAAAAAATTAAAAATTGGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179155	179183	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT6;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179184	179215	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER6;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=AGATCGGCGTGCTGTTCAGGACGCTTGATACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179216	179244	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT7;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179245	179276	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER7;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=AATGCTGGAATGACTGGGCTTCGGGGCGGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179277	179305	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT8;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179306	179337	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER8;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CGAAATGGACAGAAAAACATACGCGAACAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179338	179366	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT9;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CCGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	179367	179398	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_SPACER9;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=TTCGGACTGTAAATCGACCAGCTCAAGTTGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	179399	179427	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1_2_REPEAT10;Parent=SEQF4840.1|JAGFJW010000006.1_2;Note=CTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	repeat_region	205675	205887	213	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4;Genome_ID=SEQF4840.1;Note=Predictor:CCtyper;Start:205675;End:205887;Consensus_Repeat:AGTGTTCCCCGCGCGAGCGGGGATAAACCG;Number_of_Repeats:4;Repeat_Length:29.2;Average_Spacer_Length:32.0;Repeat_Identity:90.8;Spacer_Identity:39.2;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.998;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	205675	205704	30	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_REPEAT1;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=AGTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	205705	205735	31	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_SPACER1;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=CCAGTTTTCCCGTCGTGGTATTTGACCCGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	205736	205765	30	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_REPEAT2;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=CGTGTTCCCCGCGCGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	205766	205797	32	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_SPACER2;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=ATGAACCCACCGGAAGTAGGAAAACTTTCGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	205798	205826	29	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_REPEAT3;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=GTGTTCCCCGCGTGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	binding_site	205827	205859	33	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_SPACER3;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=TTCTTCGACAAAGGCGGCAAGAAGAAGATCGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	direct_repeat	205860	205887	28	+	.	ID=SEQF4840.1|JAGFJW010000006.1-2_4_REPEAT4;Parent=SEQF4840.1|JAGFJW010000006.1-2_4;Note=TGTTCCCCGCGTGAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4840.1|JAGFJW010000006.1	CCTyper	OPERON	196762	205579	8818	+	.	ID=SEQF4840.1|JAGFJW010000006.1@2;Genome_ID=SEQF4840.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=Cas3_1_CAS-I,Cse1_0_IE,Cse2gr11_1_CAS-I-E,Cas7_0_IE,Cas5_0_CAS-I-E,Cas6_0_IE,Cas1_0_IE,Cas2_1_CAS-I-II-III-IV-V-VI;Positions=179,180,181,182,183,184,185,186;E-values=8.30e-112,6.60e-145,1.30e-33,1.80e-108,9.90e-55,3.70e-64,1.00e-114,1.20e-40;CoverageSeq=0.844,0.958,0.748,0.913,0.693,0.977,0.866,0.929;CoverageHMM=0.925,0.986,0.986,1.0,0.945,0.995,0.989,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	204369	205286	306	+	.	ID=SEQF4840.1|JAGFJW010000006.1_185_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=1e-114;Score=380.2;Coverage_Seq=0.8660130718954249;Coverage_Hmm=0.9888475836431226
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	205286	205579	98	+	.	ID=SEQF4840.1|JAGFJW010000006.1_186_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-40;Score=135.5;Coverage_Seq=0.9285714285714286;Coverage_Hmm=1.0
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	196762	199284	841	+	.	ID=SEQF4840.1|JAGFJW010000006.1_179_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=8.3e-112;Score=372.7;Coverage_Seq=0.8442330558858502;Coverage_Hmm=0.9248322147651007
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	202988	203740	251	+	.	ID=SEQF4840.1|JAGFJW010000006.1_183_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=+;E-value=9.9e-55;Score=183.1;Coverage_Seq=0.6932270916334662;Coverage_Hmm=0.945054945054945
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	203722	204372	217	+	.	ID=SEQF4840.1|JAGFJW010000006.1_184_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_IE;coding_strand=+;E-value=3.7e-64;Score=214.7;Coverage_Seq=0.9769585253456221;Coverage_Hmm=0.9951923076923077
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	201905	202978	358	+	.	ID=SEQF4840.1|JAGFJW010000006.1_182_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IE;coding_strand=+;E-value=1.8e-108;Score=361.2;Coverage_Seq=0.9134078212290503;Coverage_Hmm=1.0
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	199716	201287	524	+	.	ID=SEQF4840.1|JAGFJW010000006.1_180_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cse1_0_IE;coding_strand=+;E-value=6.600000000000001e-145;Score=481.7;Coverage_Seq=0.9580152671755725;Coverage_Hmm=0.9861111111111112
SEQF4840.1|JAGFJW010000006.1	CCTyper	CDS	201288	201893	202	+	.	ID=SEQF4840.1|JAGFJW010000006.1_181_cas;Genome_ID=SEQF4840.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_1_CAS-I-E;coding_strand=+;E-value=1.3000000000000001e-33;Score=114.1;Coverage_Seq=0.7475247524752475;Coverage_Hmm=0.986013986013986