SEQF4960.1|RQWF01000031.1	CCTyper	repeat_region	3942	4175	234	+	.	ID=SEQF4960.1|RQWF01000031.1_1;Genome_ID=SEQF4960.1;Note=Predictor:CCtyper;Start:3942;End:4175;Consensus_Repeat:GTTTTGGAAGCATTCAAAACAACATAGCTCTAAAAC;Number_of_Repeats:4;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:90.0;Spacer_Identity:44.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.997;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	direct_repeat	3942	3977	36	+	.	ID=SEQF4960.1|RQWF01000031.1_1_REPEAT1;Parent=SEQF4960.1|RQWF01000031.1_1;Note=GACTTGAAAACATTCAAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	binding_site	3978	4007	30	+	.	ID=SEQF4960.1|RQWF01000031.1_1_SPACER1;Parent=SEQF4960.1|RQWF01000031.1_1;Note=AGGCGAAGAAATATTTGAAGTAATGATGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	direct_repeat	4008	4043	36	+	.	ID=SEQF4960.1|RQWF01000031.1_1_REPEAT2;Parent=SEQF4960.1|RQWF01000031.1_1;Note=GTTTTGGAAGCATTCAAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	binding_site	4044	4073	30	+	.	ID=SEQF4960.1|RQWF01000031.1_1_SPACER2;Parent=SEQF4960.1|RQWF01000031.1_1;Note=TAGTTCTTTGAAGTTTGGAATTGTTTCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	direct_repeat	4074	4109	36	+	.	ID=SEQF4960.1|RQWF01000031.1_1_REPEAT3;Parent=SEQF4960.1|RQWF01000031.1_1;Note=GTTTTGGAAGCATTCAAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	binding_site	4110	4139	30	+	.	ID=SEQF4960.1|RQWF01000031.1_1_SPACER3;Parent=SEQF4960.1|RQWF01000031.1_1;Note=ATGCCTTGATGTTCGAACTCCTGATCCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000031.1	CCTyper	direct_repeat	4140	4175	36	+	.	ID=SEQF4960.1|RQWF01000031.1_1_REPEAT4;Parent=SEQF4960.1|RQWF01000031.1_1;Note=GTTTTGGAAGCATTCAAAACAACATAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4960.1|RQWF01000029.1	CCTyper	OPERON	12924	18751	5828	-	.	ID=SEQF4960.1|RQWF01000029.1@1;Genome_ID=SEQF4960.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II,Cas9_1_CAS-II-C;Positions=10,11,12,13,14;E-values=1.20e-100,2.70e-46,7.50e-100,9.30e-252,1.10e-65;CoverageSeq=0.991,0.965,0.931,0.974,0.98;CoverageHMM=0.982,0.983,0.996,0.854,0.44;Strand_Interference=-1;Strand_Adaptation=-1
SEQF4960.1|RQWF01000029.1	CCTyper	CDS	13899	14765	289	-	.	ID=SEQF4960.1|RQWF01000029.1_12_cas;Genome_ID=SEQF4960.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.5e-100;Score=331.0;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF4960.1|RQWF01000029.1	CCTyper	CDS	13558	13902	115	-	.	ID=SEQF4960.1|RQWF01000029.1_11_cas;Genome_ID=SEQF4960.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.7e-46;Score=154.0;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF4960.1|RQWF01000029.1	CCTyper	CDS	17996	18751	252	-	.	ID=SEQF4960.1|RQWF01000029.1_14_cas;Genome_ID=SEQF4960.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=-;E-value=1.1e-65;Score=219.9;Coverage_Seq=0.9801587301587301;Coverage_Hmm=0.44014084507042256
SEQF4960.1|RQWF01000029.1	CCTyper	CDS	14747	17986	1080	-	.	ID=SEQF4960.1|RQWF01000029.1_13_cas;Genome_ID=SEQF4960.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=9.3e-252;Score=836.0;Coverage_Seq=0.9740740740740741;Coverage_Hmm=0.8535714285714285
SEQF4960.1|RQWF01000029.1	CCTyper	CDS	12924	13568	215	-	.	ID=SEQF4960.1|RQWF01000029.1_10_cas;Genome_ID=SEQF4960.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1.2e-100;Score=333.0;Coverage_Seq=0.9906976744186047;Coverage_Hmm=0.981651376146789