SEQF4961.1|SEHG01000078.1	CCTyper	repeat_region	36550	36707	158	+	.	ID=SEQF4961.1|SEHG01000078.1_1;Genome_ID=SEQF4961.1;Note=Predictor:CCtyper;Start:36550;End:36707;Consensus_Repeat:GTTTTAGAGCTATGTTGTTTTGAATG;Number_of_Repeats:3;Repeat_Length:26;Average_Spacer_Length:40;Repeat_Identity:100.0;Spacer_Identity:50.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.964;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4961.1|SEHG01000078.1	CCTyper	direct_repeat	36550	36575	26	+	.	ID=SEQF4961.1|SEHG01000078.1_1_REPEAT1;Parent=SEQF4961.1|SEHG01000078.1_1;Note=GTTTTAGAGCTATGTTGTTTTGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4961.1|SEHG01000078.1	CCTyper	binding_site	36576	36615	40	+	.	ID=SEQF4961.1|SEHG01000078.1_1_SPACER1;Parent=SEQF4961.1|SEHG01000078.1_1;Note=CTTCCAAAACACAGGATCAGGAGTTCGAACATCAAGGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4961.1|SEHG01000078.1	CCTyper	direct_repeat	36616	36641	26	+	.	ID=SEQF4961.1|SEHG01000078.1_1_REPEAT2;Parent=SEQF4961.1|SEHG01000078.1_1;Note=GTTTTAGAGCTATGTTGTTTTGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4961.1|SEHG01000078.1	CCTyper	binding_site	36642	36681	40	+	.	ID=SEQF4961.1|SEHG01000078.1_1_SPACER2;Parent=SEQF4961.1|SEHG01000078.1_1;Note=CTTCCAAAACTTCATCATTACTTCAAATATTTCTTCGCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4961.1|SEHG01000078.1	CCTyper	direct_repeat	36682	36707	26	+	.	ID=SEQF4961.1|SEHG01000078.1_1_REPEAT3;Parent=SEQF4961.1|SEHG01000078.1_1;Note=GTTTTAGAGCTATGTTGTTTTGAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF4961.1|SEHG01000040.1	CCTyper	OPERON	45487	51315	5829	+	.	ID=SEQF4961.1|SEHG01000040.1@1;Genome_ID=SEQF4961.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_CAS-II-C,Cas9_1_CAS-II-C,Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=36,37,38,39,40,41;E-values=2.70e-65,5.80e-18,5.10e-234,8.30e-100,3.00e-46,1.30e-100;CoverageSeq=0.98,0.707,0.988,0.931,0.965,0.991;CoverageHMM=0.44,0.21,0.754,0.996,0.983,0.982;Strand_Interference=1;Strand_Adaptation=1
SEQF4961.1|SEHG01000040.1	CCTyper	CDS	49474	50340	289	+	.	ID=SEQF4961.1|SEHG01000040.1_39_cas;Genome_ID=SEQF4961.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.300000000000001e-100;Score=331.0;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF4961.1|SEHG01000040.1	CCTyper	CDS	50337	50681	115	+	.	ID=SEQF4961.1|SEHG01000040.1_40_cas;Genome_ID=SEQF4961.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=3e-46;Score=154.0;Coverage_Seq=0.9652173913043478;Coverage_Hmm=0.9827586206896551
SEQF4961.1|SEHG01000040.1	CCTyper	CDS	45487	46242	252	+	.	ID=SEQF4961.1|SEHG01000040.1_36_cas;Genome_ID=SEQF4961.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=+;E-value=2.7000000000000003e-65;Score=218.8;Coverage_Seq=0.9801587301587301;Coverage_Hmm=0.44014084507042256
SEQF4961.1|SEHG01000040.1	CCTyper	CDS	46252	46752	167	+	.	ID=SEQF4961.1|SEHG01000040.1_37_cas;Genome_ID=SEQF4961.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_CAS-II-C;coding_strand=+;E-value=5.8e-18;Score=62.5;Coverage_Seq=0.7065868263473054;Coverage_Hmm=0.20950704225352113
SEQF4961.1|SEHG01000040.1	CCTyper	CDS	46799	49492	898	+	.	ID=SEQF4961.1|SEHG01000040.1_38_cas;Genome_ID=SEQF4961.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=5.1e-234;Score=777.4;Coverage_Seq=0.987750556792873;Coverage_Hmm=0.7544642857142857
SEQF4961.1|SEHG01000040.1	CCTyper	CDS	50671	51315	215	+	.	ID=SEQF4961.1|SEHG01000040.1_41_cas;Genome_ID=SEQF4961.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.3e-100;Score=333.0;Coverage_Seq=0.9906976744186047;Coverage_Hmm=0.981651376146789