SEQF5000.1|JAHDTU010000005.1	CCTyper	repeat_region	119259	120569	1311	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1;Genome_ID=SEQF5000.1;Note=Predictor:CCtyper;Start:119259;End:120569;Consensus_Repeat:GGCTCACCCCCGCGTAGGCGGGGAAGAC;Number_of_Repeats:22;Repeat_Length:28;Average_Spacer_Length:33.1;Repeat_Identity:100.0;Spacer_Identity:42.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.402;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119259	119286	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT1;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119287	119319	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER1;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=ATCTCTGCAAGCCGATTTGTTCCAGCAGTAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119320	119347	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT2;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119348	119380	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER2;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GCCTCGCGGATGATCTCTAGAACGTCGTCGCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119381	119408	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT3;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119409	119441	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER3;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=CCGTAGCATCGGGCGCACCCGCTCCGGTGGTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119442	119469	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT4;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119470	119502	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER4;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCAACGGCATCCAGATAGGAGCGACGCGCCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119503	119530	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT5;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119531	119563	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER5;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=ACGACGGTCACCCGGTCACGCTGCCGGGTCTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119564	119591	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT6;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119592	119624	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER6;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGGCTTGACATGTTCCGAATGAACACTAAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119625	119652	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT7;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119653	119685	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER7;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GTCGCATTCCCACTTTTTCTTTTGAGCAACGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119686	119713	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT8;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119714	119746	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER8;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=TTTGTGGGCTCGGGCGTGACCTTCAAAATAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119747	119774	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT9;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119775	119807	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER9;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=ATGAGCTGAACAAACTCACCGCGCGTCGCGGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119808	119835	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT10;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119836	119868	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER10;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=TCAGTGTGCTCGGAAATTGACTTCATACGGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119869	119896	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT11;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119897	119929	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER11;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=TCATTCTAAAGGGCTGTTGAAAGACCCGAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119930	119957	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT12;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	119958	119991	34	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER12;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GAGCGTACCCGGCGTGGGTTTAAGGTGCTGACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	119992	120019	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT13;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120020	120052	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER13;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=CGGCTCCACTGGCCCGGATTGTTGGGCGTGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120053	120080	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT14;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120081	120113	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER14;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=TGCGTAGCGCCATTTACACCATGTATCTCGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120114	120141	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT15;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120142	120174	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER15;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=CGTCGATTGTCGGATCCAAAGGAAACGGATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120175	120202	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT16;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120203	120235	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER16;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=TATGGGTGGCTCATGTCGTCATTACAGCCCGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120236	120263	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT17;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120264	120297	34	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER17;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=CGCTACCGCATCTCGCAGTCGGCAATCGCCGCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120298	120325	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT18;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120326	120358	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER18;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GTATGGGCGTCATTAATACTACACGAACAGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120359	120386	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT19;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120387	120419	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER19;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=AATGGTGCGACGGCGTATTTCTTCAATACCTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120420	120447	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT20;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120448	120480	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER20;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGTCACGCTGTCGTTGGCTTCGTGGGCCACTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120481	120508	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT21;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	binding_site	120509	120541	33	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_SPACER21;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=ACCTGTGCGGGGCACTGTGGGACGGCCTGTGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	direct_repeat	120542	120569	28	+	.	ID=SEQF5000.1|JAHDTU010000005.1_1_REPEAT22;Parent=SEQF5000.1|JAHDTU010000005.1_1;Note=GGCTCACCCCCGCGTAGGCGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5000.1|JAHDTU010000005.1	CCTyper	OPERON	120624	129479	8856	-	.	ID=SEQF5000.1|JAHDTU010000005.1@4;Genome_ID=SEQF5000.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas2_10_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas5_1_CAS-I-E,Cas7_1_CAS-I-E,Cse2gr11_7_CAS-I-E,Cas8e_4_CAS-I-E,Cas3_0_CAS-I;Positions=110,111,112,113,114,115,116,117;E-values=2.80e-32,4.40e-104,9.30e-49,1.00e-49,3.40e-117,5.80e-29,4.60e-117,2.80e-62;CoverageSeq=0.714,0.853,0.977,0.691,0.944,0.733,0.857,0.445;CoverageHMM=1.0,0.993,1.0,0.994,0.994,0.993,0.996,0.997;Strand_Interference=-1;Strand_Adaptation=-1
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	120971	121909	313	-	.	ID=SEQF5000.1|JAHDTU010000005.1_111_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=4.4e-104;Score=344.5;Coverage_Seq=0.853035143769968;Coverage_Hmm=0.9925650557620818
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	120624	120980	119	-	.	ID=SEQF5000.1|JAHDTU010000005.1_110_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.8e-32;Score=107.8;Coverage_Seq=0.7142857142857143;Coverage_Hmm=1.0
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	126687	129479	931	-	.	ID=SEQF5000.1|JAHDTU010000005.1_117_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=2.8e-62;Score=207.9;Coverage_Seq=0.4446831364124597;Coverage_Hmm=0.9971671388101983
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	122578	123285	236	-	.	ID=SEQF5000.1|JAHDTU010000005.1_113_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-E;coding_strand=-;E-value=1.0000000000000001e-49;Score=165.9;Coverage_Seq=0.690677966101695;Coverage_Hmm=0.9944444444444445
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	121913	122578	222	-	.	ID=SEQF5000.1|JAHDTU010000005.1_112_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9.3e-49;Score=163.5;Coverage_Seq=0.9774774774774775;Coverage_Hmm=1.0
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	123282	124406	375	-	.	ID=SEQF5000.1|JAHDTU010000005.1_114_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=-;E-value=3.4e-117;Score=388.9;Coverage_Seq=0.944;Coverage_Hmm=0.9944289693593314
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	125032	126690	553	-	.	ID=SEQF5000.1|JAHDTU010000005.1_116_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=-;E-value=4.6e-117;Score=388.9;Coverage_Seq=0.8571428571428571;Coverage_Hmm=0.9956989247311828
SEQF5000.1|JAHDTU010000005.1	CCTyper	CDS	124403	125032	210	-	.	ID=SEQF5000.1|JAHDTU010000005.1_115_cas;Genome_ID=SEQF5000.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_7_CAS-I-E;coding_strand=-;E-value=5.799999999999999e-29;Score=98.4;Coverage_Seq=0.7333333333333333;Coverage_Hmm=0.9930555555555556