SEQF5010.1|JAHDTR010000005.1	CCTyper	repeat_region	20074	21444	1371	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1;Genome_ID=SEQF5010.1;Note=Predictor:CCtyper;Start:20074;End:21444;Consensus_Repeat:GTCTTCCCCGCCTACGCGGGGGTGAGCC;Number_of_Repeats:23;Repeat_Length:28;Average_Spacer_Length:33.0;Repeat_Identity:100.0;Spacer_Identity:41.8;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.402;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20074	20101	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT1;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20102	20134	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER1;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GGCTTCAAAGAATATGCTATTAAATGTAAGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20135	20162	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT2;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20163	20195	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER2;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GCTCGCCTTGATTGGCGCTCGCGTTGACATGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20196	20223	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT3;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20224	20256	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER3;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=CTCAACAGAAAATCATTCGAGAATATGAACGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20257	20284	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT4;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20285	20317	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER4;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TACCATGCTGTGCTCATGGGGCCACTATCGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20318	20345	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT5;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20346	20378	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER5;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TCTAGGGCATTCTCGAGCGTCGACGACGCTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20379	20406	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT6;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20407	20439	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER6;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GATCAATACAATTGGCCACCGGGGTATTTACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20440	20467	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT7;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20468	20500	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER7;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GGGCATTGGCGACTTCCCGATGTGGAAGTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20501	20528	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT8;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20529	20561	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER8;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TTTGCAGTCAAACTATTGGCTGCACCATCACGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20562	20589	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT9;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20590	20622	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER9;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GACAAGACCGCGACGTCCATTGAGGCTGGCGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20623	20650	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT10;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20651	20683	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER10;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCGGTCAACTATGATCTTTTGATGATGTCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20684	20711	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT11;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20712	20744	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER11;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TTTCAGTGGTCATGTCGAATGTGTCATTACCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20745	20772	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT12;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20773	20805	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER12;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=ACCACCCACCCAAACAGAGTTATCGACCCCGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20806	20833	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT13;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20834	20866	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER13;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TCACACGTCGGCTCACCATACGGCATATCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20867	20894	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT14;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20895	20927	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER14;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GATCTGGAACAGTCGGTGTGGGGTACGGAGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20928	20955	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT15;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	20956	20988	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER15;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TCGGCTCGCCCTCCACAGGAATAGCCTTGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	20989	21016	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT16;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21017	21049	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER16;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TCCCAGGGCGTGAACCTCCGCAGTTTTGCACGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21050	21077	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT17;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21078	21111	34	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER17;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=ATGCCCCTCAGACGCTCTCCCTGCTGCCTAGGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21112	21139	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT18;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21140	21172	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER18;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=TGAACCGCGACGACGTTCTGGAGATCATCCGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21173	21200	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT19;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21201	21233	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER19;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GCTACACAAGTGGTTTACCCCTGCGTCCGGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21234	21261	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT20;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21262	21294	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER20;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GACGCTTGGGCTGTCATCCCCTCCGCCGCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21295	21322	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT21;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21323	21355	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER21;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GGGCGTTTGCCAGATAATGTTGAACGTGTTTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21356	21383	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT22;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	binding_site	21384	21416	33	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_SPACER22;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GATAGATCGATGCCTATGTAGCGGTGCATCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	direct_repeat	21417	21444	28	+	.	ID=SEQF5010.1|JAHDTR010000005.1_1_REPEAT23;Parent=SEQF5010.1|JAHDTR010000005.1_1;Note=GTCTTCCCCGCCTACGCGGGGGTGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5010.1|JAHDTR010000005.1	CCTyper	OPERON	11164	20019	8856	+	.	ID=SEQF5010.1|JAHDTR010000005.1@1;Genome_ID=SEQF5010.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas3_0_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_7_CAS-I-E,Cas7_1_CAS-I-E,Cas5_1_CAS-I-E,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_10_CAS-I-II-III-IV-V-VI;Positions=13,14,15,16,17,18,19,20;E-values=2.80e-62,1.10e-115,1.70e-28,4.00e-117,2.30e-50,9.30e-49,4.40e-104,2.80e-32;CoverageSeq=0.445,0.857,0.733,0.944,0.691,0.977,0.853,0.714;CoverageHMM=0.997,0.996,0.993,0.994,0.994,1.0,0.993,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	18734	19672	313	+	.	ID=SEQF5010.1|JAHDTR010000005.1_19_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=4.4e-104;Score=344.5;Coverage_Seq=0.853035143769968;Coverage_Hmm=0.9925650557620818
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	19663	20019	119	+	.	ID=SEQF5010.1|JAHDTR010000005.1_20_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.8e-32;Score=107.8;Coverage_Seq=0.7142857142857143;Coverage_Hmm=1.0
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	11164	13956	931	+	.	ID=SEQF5010.1|JAHDTR010000005.1_13_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=2.8e-62;Score=207.9;Coverage_Seq=0.4446831364124597;Coverage_Hmm=0.9971671388101983
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	17358	18065	236	+	.	ID=SEQF5010.1|JAHDTR010000005.1_17_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas5_1_CAS-I-E;coding_strand=+;E-value=2.3e-50;Score=168.0;Coverage_Seq=0.690677966101695;Coverage_Hmm=0.9944444444444445
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	18065	18730	222	+	.	ID=SEQF5010.1|JAHDTR010000005.1_18_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.3e-49;Score=163.5;Coverage_Seq=0.9774774774774775;Coverage_Hmm=1.0
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	16237	17361	375	+	.	ID=SEQF5010.1|JAHDTR010000005.1_16_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=4e-117;Score=388.7;Coverage_Seq=0.944;Coverage_Hmm=0.9944289693593314
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	13953	15611	553	+	.	ID=SEQF5010.1|JAHDTR010000005.1_14_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=1.1e-115;Score=384.4;Coverage_Seq=0.8571428571428571;Coverage_Hmm=0.9956989247311828
SEQF5010.1|JAHDTR010000005.1	CCTyper	CDS	15611	16240	210	+	.	ID=SEQF5010.1|JAHDTR010000005.1_15_cas;Genome_ID=SEQF5010.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_7_CAS-I-E;coding_strand=+;E-value=1.7000000000000003e-28;Score=96.8;Coverage_Seq=0.7333333333333333;Coverage_Hmm=0.9930555555555556