SEQF5119.2|CP012506.2	CCTyper	repeat_region	3114254	3115401	1148	+	.	ID=SEQF5119.2|CP012506.2_1;Genome_ID=SEQF5119.2;Note=Predictor:CCtyper;Start:3114254;End:3115401;Consensus_Repeat:GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Number_of_Repeats:16;Repeat_Length:36;Average_Spacer_Length:38.1;Repeat_Identity:96.8;Spacer_Identity:42.2;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114254	3114289	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT1;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114290	3114327	38	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER1;Parent=SEQF5119.2|CP012506.2_1;Note=TCGGGCACGGCCGAAACACCGCGCGAAGGGCGGTTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114328	3114363	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT2;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGTGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114364	3114403	40	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER2;Parent=SEQF5119.2|CP012506.2_1;Note=TGGGAGGATGTCACTCGGACATAGCTGTCATCGGCGGTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114404	3114439	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT3;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGAGGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114440	3114479	40	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER3;Parent=SEQF5119.2|CP012506.2_1;Note=ATGGAGCAGTAGCGTGGCTGTGGTGTGGCGGGCGATATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114480	3114515	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT4;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114516	3114552	37	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER4;Parent=SEQF5119.2|CP012506.2_1;Note=TGCTGCACCTCCCGCACCCGGTGCGATTCTGCGTCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114553	3114588	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT5;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCCGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114589	3114624	36	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER5;Parent=SEQF5119.2|CP012506.2_1;Note=CCCGATAGTCGCGCTCGTCCATGTCCCACCATGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114625	3114660	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT6;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114661	3114695	35	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER6;Parent=SEQF5119.2|CP012506.2_1;Note=TACCTGATAGAAGCCGGAAAGCTCCGTGCCGTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114696	3114731	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT7;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114732	3114769	38	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER7;Parent=SEQF5119.2|CP012506.2_1;Note=AGGGCACTGGACCTGTATGAGGCACAGATGGCGTACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114770	3114805	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT8;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114806	3114845	40	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER8;Parent=SEQF5119.2|CP012506.2_1;Note=CCGGATCGGTTACCCACGCCGATTTACTGGCCATCGTCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114846	3114881	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT9;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114882	3114916	35	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER9;Parent=SEQF5119.2|CP012506.2_1;Note=ACTTGCGCGCACAACGCATCCGCCATCCACGGGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114917	3114952	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT10;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3114953	3114989	37	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER10;Parent=SEQF5119.2|CP012506.2_1;Note=CTGAAAGGGGGACTGTGGACGAGTTCGCGCTCAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3114990	3115025	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT11;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3115026	3115063	38	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER11;Parent=SEQF5119.2|CP012506.2_1;Note=GCGAGAATAAGATTGTCAGGCTGGTGCTGCGTTTCCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3115064	3115099	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT12;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3115100	3115137	38	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER12;Parent=SEQF5119.2|CP012506.2_1;Note=ACTCTCAACCGCGCCACGCTCAAAAAAAGTGTTATTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3115138	3115173	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT13;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3115174	3115209	36	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER13;Parent=SEQF5119.2|CP012506.2_1;Note=CCGCTGGGGGCAGGCCCAGGTGGGACGGTTCCTCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3115210	3115245	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT14;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3115246	3115288	43	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER14;Parent=SEQF5119.2|CP012506.2_1;Note=TTCGGGAGCATGCCGCAGCTGCGGATGTGGTGCTGGATTTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3115289	3115324	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT15;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	binding_site	3115325	3115365	41	+	.	ID=SEQF5119.2|CP012506.2_1_SPACER15;Parent=SEQF5119.2|CP012506.2_1;Note=ACGTTGGAAGCGTTTCGAGCGTACGGACTTTCCGGATGCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	direct_repeat	3115366	3115401	36	+	.	ID=SEQF5119.2|CP012506.2_1_REPEAT16;Parent=SEQF5119.2|CP012506.2_1;Note=GTTTCCGTCCCCTCTCTGAACCGCCCCGGCATGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5119.2|CP012506.2	CCTyper	OPERON	3116721	3121372	4652	-	.	ID=SEQF5119.2|CP012506.2@35;Genome_ID=SEQF5119.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=80%;Complete_Adaptation=NA;Best_type=III-A;Best_score=13.0;Genes=Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2_0_IIIA,Cas10_5_CAS-III,Cas6_8_CAS-I-II-III-IV-V-VI;Positions=2917,2918,2919,2920,2921;E-values=4.80e-39,6.00e-80,1.50e-22,1.80e-237,4.40e-93;CoverageSeq=0.958,0.899,0.752,0.991,0.947;CoverageHMM=0.375,0.972,0.99,0.999,0.924;Strand_Interference=-1;Strand_Adaptation=NA
SEQF5119.2|CP012506.2	CCTyper	CDS	3118149	3120602	818	-	.	ID=SEQF5119.2|CP012506.2_2920_cas;Genome_ID=SEQF5119.2;Feature_type=CDS;Product=Cas Prediction : Cas10_5_CAS-III;coding_strand=-;E-value=1.8e-237;Score=788.5;Coverage_Seq=0.991442542787286;Coverage_Hmm=0.9988066825775657
SEQF5119.2|CP012506.2	CCTyper	CDS	3120584	3121372	263	-	.	ID=SEQF5119.2|CP012506.2_2921_cas;Genome_ID=SEQF5119.2;Feature_type=CDS;Product=Cas Prediction : Cas6_8_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.4e-93;Score=309.5;Coverage_Seq=0.9467680608365019;Coverage_Hmm=0.9236363636363636
SEQF5119.2|CP012506.2	CCTyper	CDS	3117778	3118152	125	-	.	ID=SEQF5119.2|CP012506.2_2919_cas;Genome_ID=SEQF5119.2;Feature_type=CDS;Product=Cas Prediction : Csm2_0_IIIA;coding_strand=-;E-value=1.5000000000000002e-22;Score=78.1;Coverage_Seq=0.752;Coverage_Hmm=0.9895833333333334
SEQF5119.2|CP012506.2	CCTyper	CDS	3117058	3117768	237	-	.	ID=SEQF5119.2|CP012506.2_2918_cas;Genome_ID=SEQF5119.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=6e-80;Score=265.9;Coverage_Seq=0.8987341772151899;Coverage_Hmm=0.9720930232558139
SEQF5119.2|CP012506.2	CCTyper	CDS	3116721	3117077	119	-	.	ID=SEQF5119.2|CP012506.2_2917_cas;Genome_ID=SEQF5119.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=4.7999999999999997e-39;Score=132.3;Coverage_Seq=0.957983193277311;Coverage_Hmm=0.3746031746031746