SEQF5485.1|JAANPQ010000019.1	CCTyper	repeat_region	93969	94362	394	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1;Genome_ID=SEQF5485.1;Note=Predictor:CCtyper;Start:93969;End:94362;Consensus_Repeat:GTGTTCCCCACGGGCGTGGGGATGAACC;Number_of_Repeats:7;Repeat_Length:28;Average_Spacer_Length:33;Repeat_Identity:86.9;Spacer_Identity:44.7;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.99;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	93969	93996	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT1;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	binding_site	93997	94029	33	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_SPACER1;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GGCCATCGCCGACAGCTACCCGTGGCAGAAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	94030	94057	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT2;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	binding_site	94058	94090	33	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_SPACER2;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GGCGGACGTCGTACTTCATCGCGTAGCGGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	94091	94118	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT3;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	binding_site	94119	94151	33	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_SPACER3;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTGTGGGAATGGGGGATTGATACAGAAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	94152	94179	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT4;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	binding_site	94180	94212	33	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_SPACER4;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GGCGCGGGCCGAAGTCGCCGCCCAGGCGGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	94213	94240	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT5;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	binding_site	94241	94273	33	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_SPACER5;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GCGCGGTAAGCGCCGCGAGGACACCACCCTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	94274	94301	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT6;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	binding_site	94302	94334	33	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_SPACER6;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=AGAAGAGCCAACCAGACTGCCGAAGGTCGAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	direct_repeat	94335	94362	28	+	.	ID=SEQF5485.1|JAANPQ010000019.1_1_REPEAT7;Parent=SEQF5485.1|JAANPQ010000019.1_1;Note=CTGTTCCCCAAAAACGTGGGGATGAGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	repeat_region	4920	5436	517	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2;Genome_ID=SEQF5485.1;Note=Predictor:CCtyper;Start:4920;End:5436;Consensus_Repeat:CGGTTCATCCCCACACCCGTGGGGAACAC;Number_of_Repeats:9;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:91.0;Spacer_Identity:44.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	4920	4948	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT1;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=GTATTCATCCCCACGTCCGTGGGGAACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	4949	4980	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER1;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=GGGTAGACCAAGCGACCGGCTTTCTCGCCGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	4981	5009	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT2;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGCTCATCCCCACTCCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5010	5041	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER2;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=AGCCCTCGCAGCTCGCTCTTGGCCTGGGCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5042	5070	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT3;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5071	5102	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER3;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=ACCTTGTGGGCGCCGGAGTGGATCAGGGTGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5103	5131	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT4;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5132	5163	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER4;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=AAGCTCAACGCCGGCGCCACCGGCACCCCGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5164	5192	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT5;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5193	5224	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER5;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=TTGGTAGGTAGCGATGATCTTCTGTGCCTCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5225	5253	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT6;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5254	5285	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER6;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=GGCAAGCTCGCCGACCAGAAGACGGTCATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5286	5314	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT7;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5315	5346	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER7;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=GTGTCCACGGTGACGGTAGTGCCGGCGGCGTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5347	5375	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT8;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	binding_site	5376	5407	32	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_SPACER8;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=GGAACTGGCACCGTGCCCGTAACCGTGCGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000028.1	CCTyper	direct_repeat	5408	5436	29	+	.	ID=SEQF5485.1|JAANPQ010000028.1_2_REPEAT9;Parent=SEQF5485.1|JAANPQ010000028.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5485.1|JAANPQ010000019.1	CCTyper	OPERON	85239	93912	8674	+	.	ID=SEQF5485.1|JAANPQ010000019.1@1;Genome_ID=SEQF5485.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=25.0;Genes=Cas3_0_I,Cas8e_1_CAS-I-E,Cse2gr11_7_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_1_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_1_CAS-I-II-III-IV-V-VI;Positions=76,77,78,79,80,81,82,83;E-values=8.60e-68,2.70e-101,9.50e-36,5.60e-127,1.30e-52,5.60e-54,3.90e-106,9.60e-38;CoverageSeq=0.393,0.9,0.793,0.897,0.888,0.985,0.678,0.874;CoverageHMM=0.905,0.996,1.0,0.928,0.987,0.995,0.993,0.989;Strand_Interference=1;Strand_Adaptation=1
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	92402	93604	401	+	.	ID=SEQF5485.1|JAANPQ010000019.1_82_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=3.9e-106;Score=352.5;Coverage_Seq=0.6783042394014963;Coverage_Hmm=0.9925650557620818
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	93604	93912	103	+	.	ID=SEQF5485.1|JAANPQ010000019.1_83_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.6e-38;Score=126.5;Coverage_Seq=0.8737864077669902;Coverage_Hmm=0.989247311827957
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	85239	87926	896	+	.	ID=SEQF5485.1|JAANPQ010000019.1_76_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_I;coding_strand=+;E-value=8.599999999999999e-68;Score=227.3;Coverage_Seq=0.39285714285714285;Coverage_Hmm=0.9050279329608939
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	91145	91816	224	+	.	ID=SEQF5485.1|JAANPQ010000019.1_80_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=1.3e-52;Score=177.1;Coverage_Seq=0.8883928571428571;Coverage_Hmm=0.9869565217391304
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	91791	92402	204	+	.	ID=SEQF5485.1|JAANPQ010000019.1_81_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.6e-54;Score=181.7;Coverage_Seq=0.9852941176470589;Coverage_Hmm=0.9952830188679245
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	90009	91142	378	+	.	ID=SEQF5485.1|JAANPQ010000019.1_79_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=5.599999999999999e-127;Score=422.4;Coverage_Seq=0.8968253968253969;Coverage_Hmm=0.9275766016713092
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	87923	89476	518	+	.	ID=SEQF5485.1|JAANPQ010000019.1_77_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=+;E-value=2.7e-101;Score=338.3;Coverage_Seq=0.8996138996138996;Coverage_Hmm=0.9957805907172996
SEQF5485.1|JAANPQ010000019.1	CCTyper	CDS	89473	89994	174	+	.	ID=SEQF5485.1|JAANPQ010000019.1_78_cas;Genome_ID=SEQF5485.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_7_CAS-I-E;coding_strand=+;E-value=9.5e-36;Score=121.6;Coverage_Seq=0.7931034482758621;Coverage_Hmm=1.0