SEQF5495.1|PXJI01000213.1	CCTyper	repeat_region	3825	4342	518	+	.	ID=SEQF5495.1|PXJI01000213.1_1;Genome_ID=SEQF5495.1;Note=Predictor:CCtyper;Start:3825;End:4342;Consensus_Repeat:GTGTTCCCCACGGGCGTGGGGATGAACCG;Number_of_Repeats:9;Repeat_Length:29;Average_Spacer_Length:32.1;Repeat_Identity:94.9;Spacer_Identity:42.8;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	3825	3853	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT1;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGTGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	3854	3886	33	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER1;Parent=SEQF5495.1|PXJI01000213.1_1;Note=CAGTACGTCCAGGACGTGCAAGAAGGCGTGCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	3887	3915	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT2;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGTGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	3916	3947	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER2;Parent=SEQF5495.1|PXJI01000213.1_1;Note=CGATTTCTCACGGGATCACCTACAGCAGCCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	3948	3976	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT3;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGTGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	3977	4008	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER3;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GCCTACCCGACCGTAACGCTCCAGATGAGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	4009	4037	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT4;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGTGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	4038	4069	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER4;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GAGGACAACCTGATGATCGTGGAGCAGCACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	4070	4098	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT5;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	4099	4130	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER5;Parent=SEQF5495.1|PXJI01000213.1_1;Note=AAGGTGGATTGGAACGACCTGCATCAGCAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	4131	4159	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT6;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	4160	4191	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER6;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GCTCAATGGATTGGCTGTTCTAAAAGGAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	4192	4220	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT7;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	4221	4252	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER7;Parent=SEQF5495.1|PXJI01000213.1_1;Note=AACCTCAACTGGTTCAAGTACGGCGATAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	4253	4281	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT8;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGCGTGGGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	binding_site	4282	4313	32	+	.	ID=SEQF5495.1|PXJI01000213.1_1_SPACER8;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTCCCGCCCTTCCTCTACGAGCCGGAGAAGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	direct_repeat	4314	4342	29	+	.	ID=SEQF5495.1|PXJI01000213.1_1_REPEAT9;Parent=SEQF5495.1|PXJI01000213.1_1;Note=GTGTTCCCCACGGGTGTGAGGATGAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	repeat_region	684	1261	578	+	.	ID=SEQF5495.1|PXJI01000266.1_2;Genome_ID=SEQF5495.1;Note=Predictor:CCtyper;Start:684;End:1261;Consensus_Repeat:CGGTTCATCCCCACACCCGTGGGGAACAC;Number_of_Repeats:10;Repeat_Length:29;Average_Spacer_Length:32.0;Repeat_Identity:89.2;Spacer_Identity:45.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.995;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	684	712	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT1;Parent=SEQF5495.1|PXJI01000266.1_2;Note=GGGTTCGTCCCCACGCACGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	713	744	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER1;Parent=SEQF5495.1|PXJI01000266.1_2;Note=ACCATGAGGAACCCCTTGTGGATTTCCGCTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	745	773	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT2;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACTCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	774	805	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER2;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CAAGCCCCGGGCCCCGGCAACGTCTACAACAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	806	834	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT3;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	835	866	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER3;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CAGCGCAGGGTCAGCTCGTTCAGAGCCTGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	867	895	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT4;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCAGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	896	927	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER4;Parent=SEQF5495.1|PXJI01000266.1_2;Note=GGCGAAGCCGCTGGTTGGCCATCTCACACCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	928	956	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT5;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGAGGGGAACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	957	988	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER5;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CCGAGGTCCGTCCTTCTGTCCCATACCGCGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	989	1017	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT6;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	1018	1049	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER6;Parent=SEQF5495.1|PXJI01000266.1_2;Note=GACCTCTACGCGCACAATGTGCGGCTCGGCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	1050	1078	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT7;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGTGGAGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	1079	1110	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER7;Parent=SEQF5495.1|PXJI01000266.1_2;Note=GGCGCCATCGACTCCCCGTCGCCGGTGATCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	1111	1139	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT8;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	1140	1171	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER8;Parent=SEQF5495.1|PXJI01000266.1_2;Note=GTCCAGCAGCGACTGGCGCCCAGCCTCGATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	1172	1200	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT9;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	binding_site	1201	1232	32	+	.	ID=SEQF5495.1|PXJI01000266.1_2_SPACER9;Parent=SEQF5495.1|PXJI01000266.1_2;Note=GCCGACGAGGTCATCTACGACGAGCTGTCGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000266.1	CCTyper	direct_repeat	1233	1261	29	+	.	ID=SEQF5495.1|PXJI01000266.1_2_REPEAT10;Parent=SEQF5495.1|PXJI01000266.1_2;Note=CGGTTCATCCCCACACCCGTGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5495.1|PXJI01000213.1	CCTyper	OPERON	3	3768	3766	+	.	ID=SEQF5495.1|PXJI01000213.1@1;Genome_ID=SEQF5495.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=50%;Complete_Adaptation=100%;Best_type=I-E;Best_score=16.0;Genes=Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_1_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_1_CAS-I-II-III-IV-V-VI;Positions=1,2,3,4,5;E-values=9.80e-127,2.60e-52,8.40e-55,3.40e-109,9.80e-38;CoverageSeq=0.9,0.888,0.985,0.771,0.874;CoverageHMM=0.936,0.987,0.995,0.993,0.989;Strand_Interference=1;Strand_Adaptation=1
SEQF5495.1|PXJI01000254.1	CCTyper	OPERON	2	5101	5100	+	.	ID=SEQF5495.1|PXJI01000254.1@1;Genome_ID=SEQF5495.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=50%;Complete_Adaptation=0%;Best_type=I-E;Best_score=10.0;Genes=Cas3_0_CAS-I,Cas8e_1_CAS-I-E,Cse2gr11_7_CAS-I-E;Positions=1,2,3;E-values=3.10e-67,4.60e-99,5.10e-37;CoverageSeq=0.398,0.902,0.852;CoverageHMM=0.907,0.998,1.0;Strand_Interference=1;Strand_Adaptation=NA
SEQF5495.1|PXJI01000213.1	CCTyper	CDS	2402	3460	353	+	.	ID=SEQF5495.1|PXJI01000213.1_4_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=3.4e-109;Score=362.5;Coverage_Seq=0.7705382436260623;Coverage_Hmm=0.9925650557620818
SEQF5495.1|PXJI01000213.1	CCTyper	CDS	3460	3768	103	+	.	ID=SEQF5495.1|PXJI01000213.1_5_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=9.8e-38;Score=126.5;Coverage_Seq=0.8737864077669902;Coverage_Hmm=0.989247311827957
SEQF5495.1|PXJI01000254.1	CCTyper	CDS	2	2653	884	+	.	ID=SEQF5495.1|PXJI01000254.1_1_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=+;E-value=3.1e-67;Score=225.5;Coverage_Seq=0.39819004524886875;Coverage_Hmm=0.9065155807365439
SEQF5495.1|PXJI01000213.1	CCTyper	CDS	1145	1816	224	+	.	ID=SEQF5495.1|PXJI01000213.1_2_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=2.6e-52;Score=176.1;Coverage_Seq=0.8883928571428571;Coverage_Hmm=0.9869565217391304
SEQF5495.1|PXJI01000213.1	CCTyper	CDS	1791	2402	204	+	.	ID=SEQF5495.1|PXJI01000213.1_3_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=8.399999999999999e-55;Score=184.4;Coverage_Seq=0.9852941176470589;Coverage_Hmm=0.9952830188679245
SEQF5495.1|PXJI01000213.1	CCTyper	CDS	3	1142	380	+	.	ID=SEQF5495.1|PXJI01000213.1_1_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=9.799999999999999e-127;Score=421.6;Coverage_Seq=0.9;Coverage_Hmm=0.935933147632312
SEQF5495.1|PXJI01000254.1	CCTyper	CDS	3063	4619	519	+	.	ID=SEQF5495.1|PXJI01000254.1_2_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=+;E-value=4.6e-99;Score=330.9;Coverage_Seq=0.9017341040462428;Coverage_Hmm=0.9978902953586498
SEQF5495.1|PXJI01000254.1	CCTyper	CDS	4616	5101	162	+	.	ID=SEQF5495.1|PXJI01000254.1_3_cas;Genome_ID=SEQF5495.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_7_CAS-I-E;coding_strand=+;E-value=5.1e-37;Score=125.8;Coverage_Seq=0.8518518518518519;Coverage_Hmm=1.0