SEQF5533.1|CP040521.1	CCTyper	repeat_region	40735	41372	638	+	.	ID=SEQF5533.1|CP040521.1_1;Genome_ID=SEQF5533.1;Note=Predictor:CCtyper;Start:40735;End:41372;Consensus_Repeat:GTTTTCCCCGCACTAGCGGGGATGAGCC;Number_of_Repeats:11;Repeat_Length:28;Average_Spacer_Length:33;Repeat_Identity:93.6;Spacer_Identity:41.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.54;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	40735	40762	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT1;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCAGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	40763	40795	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER1;Parent=SEQF5533.1|CP040521.1_1;Note=GGGGTATGAGGGGGCACTTGTTGGGCTAGCGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	40796	40823	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT2;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCAGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	40824	40856	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER2;Parent=SEQF5533.1|CP040521.1_1;Note=GCGCAGTTATATCCGCTATTTTGTGGGTGTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	40857	40884	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT3;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCAGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	40885	40917	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER3;Parent=SEQF5533.1|CP040521.1_1;Note=CATGGATTCGCCGCTGAGCCAGTTTGTAGATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	40918	40945	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT4;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCAGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	40946	40978	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER4;Parent=SEQF5533.1|CP040521.1_1;Note=GTATGCACACGAGGTGGATGTGTGGATCATTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	40979	41006	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT5;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCAGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	41007	41039	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER5;Parent=SEQF5533.1|CP040521.1_1;Note=CCACCGACCAAAACGGCGAAAGAATCTGTGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	41040	41067	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT6;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	41068	41100	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER6;Parent=SEQF5533.1|CP040521.1_1;Note=CAGACTAATCAAGATCGGTTGCTAGGCATCATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	41101	41128	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT7;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	41129	41161	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER7;Parent=SEQF5533.1|CP040521.1_1;Note=CCGTTCGTCCCTGCGGTTTTGATCTCCCCCAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	41162	41189	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT8;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	41190	41222	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER8;Parent=SEQF5533.1|CP040521.1_1;Note=GCCTTGGTTTTGTCGTGACTGCACGCTACCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	41223	41250	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT9;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	41251	41283	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER9;Parent=SEQF5533.1|CP040521.1_1;Note=GTTGTTAACGGATCCACGAGACACACCCAGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	41284	41311	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT10;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCACTAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	binding_site	41312	41344	33	+	.	ID=SEQF5533.1|CP040521.1_1_SPACER10;Parent=SEQF5533.1|CP040521.1_1;Note=GTCATAATCAGCACTGTCAATCCTCATGTATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	direct_repeat	41345	41372	28	+	.	ID=SEQF5533.1|CP040521.1_1_REPEAT11;Parent=SEQF5533.1|CP040521.1_1;Note=GTTTTCCCCGCGTCAGCGGGGATGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5533.1|CP040521.1	CCTyper	OPERON	37697	47720	10024	+	.	ID=SEQF5533.1|CP040521.1@1;Genome_ID=SEQF5533.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=26.0;Genes=Cas3_1_CAS-I,Cas8e_4_CAS-I-E,Cse2gr11_7_CAS-I-E,Cas7_1_CAS-I-E,Cas5_0_IE,Cas6e_2_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas2_10_CAS-I-II-III-IV-V-VI;Positions=38,39,40,41,42,43,44,45;E-values=2.00e-63,2.60e-111,2.40e-33,4.70e-128,9.40e-44,6.30e-56,7.80e-107,2.90e-32;CoverageSeq=0.411,0.864,0.732,0.952,0.877,0.973,0.846,0.733;CoverageHMM=0.467,0.987,0.993,0.994,0.983,0.995,0.985,1.0;Strand_Interference=1;Strand_Adaptation=1
SEQF5533.1|CP040521.1	CCTyper	CDS	46431	47366	312	+	.	ID=SEQF5533.1|CP040521.1_44_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=7.8e-107;Score=353.6;Coverage_Seq=0.8461538461538461;Coverage_Hmm=0.9851301115241635
SEQF5533.1|CP040521.1	CCTyper	CDS	47373	47720	116	+	.	ID=SEQF5533.1|CP040521.1_45_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas2_10_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.9e-32;Score=107.8;Coverage_Seq=0.7327586206896551;Coverage_Hmm=1.0
SEQF5533.1|CP040521.1	CCTyper	CDS	37697	40498	934	+	.	ID=SEQF5533.1|CP040521.1_38_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=1.9999999999999999e-63;Score=212.0;Coverage_Seq=0.41113490364025695;Coverage_Hmm=0.4671140939597315
SEQF5533.1|CP040521.1	CCTyper	CDS	45056	45760	235	+	.	ID=SEQF5533.1|CP040521.1_42_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=+;E-value=9.4e-44;Score=146.9;Coverage_Seq=0.8765957446808511;Coverage_Hmm=0.9826086956521739
SEQF5533.1|CP040521.1	CCTyper	CDS	45762	46427	222	+	.	ID=SEQF5533.1|CP040521.1_43_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas6e_2_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.3e-56;Score=187.0;Coverage_Seq=0.972972972972973;Coverage_Hmm=0.995049504950495
SEQF5533.1|CP040521.1	CCTyper	CDS	43918	45051	378	+	.	ID=SEQF5533.1|CP040521.1_41_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas7_1_CAS-I-E;coding_strand=+;E-value=4.7e-128;Score=424.8;Coverage_Seq=0.9523809523809523;Coverage_Hmm=0.9944289693593314
SEQF5533.1|CP040521.1	CCTyper	CDS	41600	43273	558	+	.	ID=SEQF5533.1|CP040521.1_39_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_4_CAS-I-E;coding_strand=+;E-value=2.6000000000000002e-111;Score=370.0;Coverage_Seq=0.8637992831541219;Coverage_Hmm=0.9870967741935484
SEQF5533.1|CP040521.1	CCTyper	CDS	43277	43903	209	+	.	ID=SEQF5533.1|CP040521.1_40_cas;Genome_ID=SEQF5533.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_7_CAS-I-E;coding_strand=+;E-value=2.4e-33;Score=112.7;Coverage_Seq=0.7320574162679426;Coverage_Hmm=0.9930555555555556