SEQF5774.1|CP031290.1	CCTyper	repeat_region	2265860	2267479	1620	+	.	ID=SEQF5774.1|CP031290.1_1;Genome_ID=SEQF5774.1;Note=Predictor:CCtyper;Start:2265860;End:2267479;Consensus_Repeat:GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Number_of_Repeats:25;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:91.6;Spacer_Identity:40.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.994;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2265860	2265895	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT1;Parent=SEQF5774.1|CP031290.1_1;Note=CACTGAAGTTTTTTTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2265896	2265925	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER1;Parent=SEQF5774.1|CP031290.1_1;Note=TATTCAAACTGCATAGCAACTTTTCCAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2265926	2265961	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT2;Parent=SEQF5774.1|CP031290.1_1;Note=ATTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2265962	2265991	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER2;Parent=SEQF5774.1|CP031290.1_1;Note=GAGGCATGTTAGACGTCATATTTGCTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2265992	2266027	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT3;Parent=SEQF5774.1|CP031290.1_1;Note=CCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266028	2266057	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER3;Parent=SEQF5774.1|CP031290.1_1;Note=TCTCGACAACAACCCGTTTTGGCACCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266058	2266093	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT4;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266094	2266123	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER4;Parent=SEQF5774.1|CP031290.1_1;Note=TGAAATAATTGTTGACACGTGAGAACACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266124	2266159	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT5;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266160	2266189	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER5;Parent=SEQF5774.1|CP031290.1_1;Note=ACTGGCATCAATCATCATGAAGTATGCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266190	2266225	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT6;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266226	2266255	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER6;Parent=SEQF5774.1|CP031290.1_1;Note=TTAGTGGCAGAGAGGTAATGATGATCACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266256	2266291	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT7;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266292	2266321	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER7;Parent=SEQF5774.1|CP031290.1_1;Note=GCATATAGCTTGATATTGGCCGCAAGCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266322	2266357	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT8;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266358	2266387	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER8;Parent=SEQF5774.1|CP031290.1_1;Note=TTTCTGTCGGGTTTGTGGAATGGCACTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266388	2266423	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT9;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266424	2266453	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER9;Parent=SEQF5774.1|CP031290.1_1;Note=GTCTAGCCCGAGAAGTTCCGCGGCTTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266454	2266489	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT10;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266490	2266519	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER10;Parent=SEQF5774.1|CP031290.1_1;Note=CATAAGGTGGCAGCGGCCATTTGTGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266520	2266555	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT11;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266556	2266585	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER11;Parent=SEQF5774.1|CP031290.1_1;Note=TTTAAATGCGTATTTTCTTTTCTCAACTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266586	2266621	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT12;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266622	2266651	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER12;Parent=SEQF5774.1|CP031290.1_1;Note=CGCAGTCTTGCAAGCCGTAATGCTCGATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266652	2266687	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT13;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266688	2266717	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER13;Parent=SEQF5774.1|CP031290.1_1;Note=CCCATAGGCCTAGCTGTCGCCCGTAAGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266718	2266753	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT14;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266754	2266783	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER14;Parent=SEQF5774.1|CP031290.1_1;Note=ACAGCCGTCTTGATCTTGTCAGCATCACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266784	2266819	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT15;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266820	2266849	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER15;Parent=SEQF5774.1|CP031290.1_1;Note=GGGGCTTCTGCAATCTGGAATGCCCTTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266850	2266885	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT16;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266886	2266915	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER16;Parent=SEQF5774.1|CP031290.1_1;Note=TAGAATACTACCTTTTGGCACAATATTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266916	2266951	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT17;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2266952	2266981	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER17;Parent=SEQF5774.1|CP031290.1_1;Note=TCAATCGTCATGCCAAGCGGCATAGCACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2266982	2267017	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT18;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267018	2267047	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER18;Parent=SEQF5774.1|CP031290.1_1;Note=TAGTGATCATATTCATGCAACACAAACGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267048	2267083	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT19;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTAATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267084	2267113	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER19;Parent=SEQF5774.1|CP031290.1_1;Note=TTGACAAGTCAAAGTGCTCATACAAGTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267114	2267149	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT20;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267150	2267179	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER20;Parent=SEQF5774.1|CP031290.1_1;Note=TGAACTCATCGCTTACCGGCAACCAGTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267180	2267215	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT21;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267216	2267245	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER21;Parent=SEQF5774.1|CP031290.1_1;Note=GGTGGCATCACAGAAGCAACCGAAACAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267246	2267281	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT22;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267282	2267311	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER22;Parent=SEQF5774.1|CP031290.1_1;Note=AAGTGGTAAGGTCCCCAAAGATTCGATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267312	2267347	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT23;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267348	2267377	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER23;Parent=SEQF5774.1|CP031290.1_1;Note=AGCATCCTATATTTCCATGAATACTGATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267378	2267413	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT24;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	binding_site	2267414	2267443	30	+	.	ID=SEQF5774.1|CP031290.1_1_SPACER24;Parent=SEQF5774.1|CP031290.1_1;Note=AAGCAATCCAGAAACTCGGGATCGTTTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	direct_repeat	2267444	2267479	36	+	.	ID=SEQF5774.1|CP031290.1_1_REPEAT25;Parent=SEQF5774.1|CP031290.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5774.1|CP031290.1	CCTyper	OPERON	2267500	2273662	6163	-	.	ID=SEQF5774.1|CP031290.1@41;Genome_ID=SEQF5774.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=2121,2122,2123,2124;E-values=3.80e-63,9.00e-54,5.20e-79,6.20e-163;CoverageSeq=0.965,0.99,0.807,0.752;CoverageHMM=0.995,1.0,0.996,0.977;Strand_Interference=-1;Strand_Adaptation=-1
SEQF5774.1|CP031290.1	CCTyper	CDS	2268460	2269455	332	-	.	ID=SEQF5774.1|CP031290.1_2123_cas;Genome_ID=SEQF5774.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.2e-79;Score=262.6;Coverage_Seq=0.8072289156626506;Coverage_Hmm=0.9963636363636363
SEQF5774.1|CP031290.1	CCTyper	CDS	2268177	2268482	102	-	.	ID=SEQF5774.1|CP031290.1_2122_cas;Genome_ID=SEQF5774.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9e-54;Score=177.3;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF5774.1|CP031290.1	CCTyper	CDS	2269571	2273662	1364	-	.	ID=SEQF5774.1|CP031290.1_2124_cas;Genome_ID=SEQF5774.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=6.2e-163;Score=541.5;Coverage_Seq=0.7521994134897361;Coverage_Hmm=0.9771084337349397
SEQF5774.1|CP031290.1	CCTyper	CDS	2267500	2268180	227	-	.	ID=SEQF5774.1|CP031290.1_2121_cas;Genome_ID=SEQF5774.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=3.8e-63;Score=210.4;Coverage_Seq=0.9647577092511013;Coverage_Hmm=0.9954337899543378