SEQF5778.1|CP025428.1	CCTyper	repeat_region	2262714	2264333	1620	+	.	ID=SEQF5778.1|CP025428.1_1;Genome_ID=SEQF5778.1;Note=Predictor:CCtyper;Start:2262714;End:2264333;Consensus_Repeat:GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Number_of_Repeats:25;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:91.6;Spacer_Identity:40.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.994;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2262714	2262749	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT1;Parent=SEQF5778.1|CP025428.1_1;Note=CACTGAAGTTTTTTTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2262750	2262779	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER1;Parent=SEQF5778.1|CP025428.1_1;Note=TATTCAAACTGCATAGCAACTTTTCCAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2262780	2262815	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT2;Parent=SEQF5778.1|CP025428.1_1;Note=ATTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2262816	2262845	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER2;Parent=SEQF5778.1|CP025428.1_1;Note=GAGGCATGTTAGACGTCATATTTGCTGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2262846	2262881	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT3;Parent=SEQF5778.1|CP025428.1_1;Note=CCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2262882	2262911	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER3;Parent=SEQF5778.1|CP025428.1_1;Note=TCTCGACAACAACCCGTTTTGGCACCACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2262912	2262947	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT4;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2262948	2262977	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER4;Parent=SEQF5778.1|CP025428.1_1;Note=TGAAATAATTGTTGACACGTGAGAACACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2262978	2263013	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT5;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263014	2263043	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER5;Parent=SEQF5778.1|CP025428.1_1;Note=ACTGGCATCAATCATCATGAAGTATGCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263044	2263079	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT6;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263080	2263109	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER6;Parent=SEQF5778.1|CP025428.1_1;Note=TTAGTGGCAGAGAGGTAATGATGATCACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263110	2263145	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT7;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263146	2263175	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER7;Parent=SEQF5778.1|CP025428.1_1;Note=GCATATAGCTTGATATTGGCCGCAAGCTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263176	2263211	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT8;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263212	2263241	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER8;Parent=SEQF5778.1|CP025428.1_1;Note=TTTCTGTCGGGTTTGTGGAATGGCACTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263242	2263277	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT9;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263278	2263307	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER9;Parent=SEQF5778.1|CP025428.1_1;Note=GTCTAGCCCGAGAAGTTCCGCGGCTTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263308	2263343	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT10;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263344	2263373	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER10;Parent=SEQF5778.1|CP025428.1_1;Note=CATAAGGTGGCAGCGGCCATTTGTGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263374	2263409	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT11;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263410	2263439	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER11;Parent=SEQF5778.1|CP025428.1_1;Note=TTTAAATGCGTATTTTCTTTTCTCAACTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263440	2263475	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT12;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263476	2263505	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER12;Parent=SEQF5778.1|CP025428.1_1;Note=CGCAGTCTTGCAAGCCGTAATGCTCGATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263506	2263541	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT13;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263542	2263571	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER13;Parent=SEQF5778.1|CP025428.1_1;Note=CCCATAGGCCTAGCTGTCGCCCGTAAGGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263572	2263607	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT14;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263608	2263637	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER14;Parent=SEQF5778.1|CP025428.1_1;Note=ACAGCCGTCTTGATCTTGTCAGCATCACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263638	2263673	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT15;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263674	2263703	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER15;Parent=SEQF5778.1|CP025428.1_1;Note=GGGGCTTCTGCAATCTGGAATGCCCTTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263704	2263739	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT16;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263740	2263769	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER16;Parent=SEQF5778.1|CP025428.1_1;Note=TAGAATACTACCTTTTGGCACAATATTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263770	2263805	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT17;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263806	2263835	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER17;Parent=SEQF5778.1|CP025428.1_1;Note=TCAATCGTCATGCCAAGCGGCATAGCACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263836	2263871	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT18;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263872	2263901	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER18;Parent=SEQF5778.1|CP025428.1_1;Note=TAGTGATCATATTCATGCAACACAAACGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263902	2263937	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT19;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTAATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2263938	2263967	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER19;Parent=SEQF5778.1|CP025428.1_1;Note=TTGACAAGTCAAAGTGCTCATACAAGTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2263968	2264003	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT20;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2264004	2264033	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER20;Parent=SEQF5778.1|CP025428.1_1;Note=TGAACTCATCGCTTACCGGCAACCAGTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2264034	2264069	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT21;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2264070	2264099	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER21;Parent=SEQF5778.1|CP025428.1_1;Note=GGTGGCATCACAGAAGCAACCGAAACAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2264100	2264135	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT22;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2264136	2264165	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER22;Parent=SEQF5778.1|CP025428.1_1;Note=AAGTGGTAAGGTCCCCAAAGATTCGATGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2264166	2264201	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT23;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2264202	2264231	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER23;Parent=SEQF5778.1|CP025428.1_1;Note=AGCATCCTATATTTCCATGAATACTGATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2264232	2264267	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT24;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	binding_site	2264268	2264297	30	+	.	ID=SEQF5778.1|CP025428.1_1_SPACER24;Parent=SEQF5778.1|CP025428.1_1;Note=AAGCAATCCAGAAACTCGGGATCGTTTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	direct_repeat	2264298	2264333	36	+	.	ID=SEQF5778.1|CP025428.1_1_REPEAT25;Parent=SEQF5778.1|CP025428.1_1;Note=GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5778.1|CP025428.1	CCTyper	OPERON	2264354	2270516	6163	-	.	ID=SEQF5778.1|CP025428.1@41;Genome_ID=SEQF5778.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_3_CAS-II-A,Cas2_9_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II;Positions=2113,2114,2115,2116;E-values=3.80e-63,9.00e-54,5.20e-79,6.10e-163;CoverageSeq=0.965,0.99,0.807,0.752;CoverageHMM=0.995,1.0,0.996,0.977;Strand_Interference=-1;Strand_Adaptation=-1
SEQF5778.1|CP025428.1	CCTyper	CDS	2265314	2266309	332	-	.	ID=SEQF5778.1|CP025428.1_2115_cas;Genome_ID=SEQF5778.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.2e-79;Score=262.6;Coverage_Seq=0.8072289156626506;Coverage_Hmm=0.9963636363636363
SEQF5778.1|CP025428.1	CCTyper	CDS	2265031	2265336	102	-	.	ID=SEQF5778.1|CP025428.1_2114_cas;Genome_ID=SEQF5778.1;Feature_type=CDS;Product=Cas Prediction : Cas2_9_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=9e-54;Score=177.3;Coverage_Seq=0.9901960784313726;Coverage_Hmm=1.0
SEQF5778.1|CP025428.1	CCTyper	CDS	2266425	2270516	1364	-	.	ID=SEQF5778.1|CP025428.1_2116_cas;Genome_ID=SEQF5778.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=6.1e-163;Score=541.5;Coverage_Seq=0.7521994134897361;Coverage_Hmm=0.9771084337349397
SEQF5778.1|CP025428.1	CCTyper	CDS	2264354	2265034	227	-	.	ID=SEQF5778.1|CP025428.1_2113_cas;Genome_ID=SEQF5778.1;Feature_type=CDS;Product=Cas Prediction : Csn2_3_CAS-II-A;coding_strand=-;E-value=3.8e-63;Score=210.4;Coverage_Seq=0.9647577092511013;Coverage_Hmm=0.9954337899543378