SEQF5832.1|LR134220.1	CCTyper	repeat_region	1045538	1046237	700	+	.	ID=SEQF5832.1|LR134220.1_1;Genome_ID=SEQF5832.1;Note=Predictor:CCtyper;Start:1045538;End:1046237;Consensus_Repeat:GTGTTCCCCGCGCCAGCGGGGATAAACCG;Number_of_Repeats:12;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:98.7;Spacer_Identity:42.9;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045538	1045566	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT1;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045567	1045598	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER1;Parent=SEQF5832.1|LR134220.1_1;Note=TCGAAAAACTTCGTCCTGAAAAAATTCATCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045599	1045627	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT2;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045628	1045659	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER2;Parent=SEQF5832.1|LR134220.1_1;Note=GCAGTAAATTATTTGACCTCGTTGATAATCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045660	1045688	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT3;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045689	1045720	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER3;Parent=SEQF5832.1|LR134220.1_1;Note=CCGGTGCAACTGATATTGATAAACGTCGACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045721	1045749	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT4;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045750	1045781	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER4;Parent=SEQF5832.1|LR134220.1_1;Note=ACACCCGACCGCTAACCGATTTCGTTACAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045782	1045810	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT5;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045811	1045842	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER5;Parent=SEQF5832.1|LR134220.1_1;Note=TGTATCACCGAAAGAATGGTTTGACGCGCAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045843	1045871	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT6;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045872	1045903	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER6;Parent=SEQF5832.1|LR134220.1_1;Note=ACGTCTATCATTTTCAGTACAAGCTGGGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045904	1045932	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT7;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045933	1045964	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER7;Parent=SEQF5832.1|LR134220.1_1;Note=GACGATCCCGAGATTCACAGAGTTACAACTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1045965	1045993	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT8;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1045994	1046025	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER8;Parent=SEQF5832.1|LR134220.1_1;Note=CGCGTAAAGAAGGCGGCAGAAATAAAGTAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1046026	1046054	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT9;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1046055	1046086	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER9;Parent=SEQF5832.1|LR134220.1_1;Note=ATTGTTATAATTATTTATTGAAATATCATTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1046087	1046115	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT10;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1046116	1046147	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER10;Parent=SEQF5832.1|LR134220.1_1;Note=AATCTATTGTGAATTTGAAATGGTCCAGCACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1046148	1046176	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT11;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGCCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	1046177	1046208	32	+	.	ID=SEQF5832.1|LR134220.1_1_SPACER11;Parent=SEQF5832.1|LR134220.1_1;Note=GGTAAAAACACGGTCTGAACCGACATTCATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	1046209	1046237	29	+	.	ID=SEQF5832.1|LR134220.1_1_REPEAT12;Parent=SEQF5832.1|LR134220.1_1;Note=GTGTTCCCCGCGTCAGCGGGGATAAACCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	repeat_region	3013399	3013603	205	+	.	ID=SEQF5832.1|LR134220.1_2;Genome_ID=SEQF5832.1;Note=Predictor:CCtyper;Start:3013399;End:3013603;Consensus_Repeat:TTTCTAAGCTGCCTGTACGGCAGTGAAC;Number_of_Repeats:4;Repeat_Length:28;Average_Spacer_Length:31;Repeat_Identity:87.5;Spacer_Identity:36.8;Spacer_Length_Sem:1.5;Trusted:True;Cas_Type_Prediction: I-F;Cas_Subtype_Prediction:I-F;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	3013399	3013426	28	+	.	ID=SEQF5832.1|LR134220.1_2_REPEAT1;Parent=SEQF5832.1|LR134220.1_2;Note=CATTTTATCTGTCTGTACGGCAGTGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	3013427	3013454	28	+	.	ID=SEQF5832.1|LR134220.1_2_SPACER1;Parent=SEQF5832.1|LR134220.1_2;Note=ATGGTGGGTGGAGTATGTTACCTGTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	3013455	3013482	28	+	.	ID=SEQF5832.1|LR134220.1_2_REPEAT2;Parent=SEQF5832.1|LR134220.1_2;Note=TTTCTAAGCTGCCTGTACGGCAGTGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	3013483	3013514	32	+	.	ID=SEQF5832.1|LR134220.1_2_SPACER2;Parent=SEQF5832.1|LR134220.1_2;Note=GCCAACTTTCACAGCCTTTGCAAGATTGTTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	3013515	3013542	28	+	.	ID=SEQF5832.1|LR134220.1_2_REPEAT3;Parent=SEQF5832.1|LR134220.1_2;Note=TTTCTAAGCTGCCTGTACGGCAGTGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	binding_site	3013543	3013575	33	+	.	ID=SEQF5832.1|LR134220.1_2_SPACER3;Parent=SEQF5832.1|LR134220.1_2;Note=GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	direct_repeat	3013576	3013603	28	+	.	ID=SEQF5832.1|LR134220.1_2_REPEAT4;Parent=SEQF5832.1|LR134220.1_2;Note=TTTCTAAGCTGCCTGTACGGCAGTGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5832.1|LR134220.1	CCTyper	OPERON	1034189	1048516	14328	+	.	ID=SEQF5832.1|LR134220.1@13;Genome_ID=SEQF5832.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=CysH_0_IVB,Cas3_1_CAS-I,Cse1_0_IE,Cse2_0_IE,Cas7_0_IE,Cas7_0_IE,Cas5_0_CAS-I-E,Cas6_0_IE,Cas1_0_IE,Cas2_1_CAS-I-II-III-IV-V-VI,CysH_0_IVB;Positions=968,972,973,974,975,976,977,978,979,980,982;E-values=5.00e-17,2.60e-175,6.00e-184,7.70e-38,5.10e-67,5.20e-44,2.10e-54,8.00e-87,4.20e-115,1.60e-40,1.50e-19;CoverageSeq=0.755,0.833,0.969,0.883,0.983,0.799,0.723,0.977,0.86,0.929,0.571;CoverageHMM=0.731,0.98,1.0,1.0,0.557,0.369,0.978,0.995,0.989,1.0,0.683;Strand_Interference=1;Strand_Adaptation=1
SEQF5832.1|LR134220.1	CCTyper	CDS	1044228	1045151	308	+	.	ID=SEQF5832.1|LR134220.1_979_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=+;E-value=4.2e-115;Score=381.5;Coverage_Seq=0.8603896103896104;Coverage_Hmm=0.9888475836431226
SEQF5832.1|LR134220.1	CCTyper	CDS	1045148	1045441	98	+	.	ID=SEQF5832.1|LR134220.1_980_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-40;Score=135.2;Coverage_Seq=0.9285714285714286;Coverage_Hmm=1.0
SEQF5832.1|LR134220.1	CCTyper	CDS	1036883	1039582	900	+	.	ID=SEQF5832.1|LR134220.1_972_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=+;E-value=2.6e-175;Score=582.8;Coverage_Seq=0.8333333333333334;Coverage_Hmm=0.9798657718120806
SEQF5832.1|LR134220.1	CCTyper	CDS	1042853	1043599	249	+	.	ID=SEQF5832.1|LR134220.1_977_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=+;E-value=2.1e-54;Score=182.1;Coverage_Seq=0.7228915662650602;Coverage_Hmm=0.978021978021978
SEQF5832.1|LR134220.1	CCTyper	CDS	1043581	1044231	217	+	.	ID=SEQF5832.1|LR134220.1_978_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_IE;coding_strand=+;E-value=8e-87;Score=288.9;Coverage_Seq=0.9769585253456221;Coverage_Hmm=0.9951923076923077
SEQF5832.1|LR134220.1	CCTyper	CDS	1041787	1042329	181	+	.	ID=SEQF5832.1|LR134220.1_975_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IE;coding_strand=+;E-value=5.1000000000000005e-67;Score=225.0;Coverage_Seq=0.9834254143646409;Coverage_Hmm=0.556923076923077
SEQF5832.1|LR134220.1	CCTyper	CDS	1042396	1042842	149	+	.	ID=SEQF5832.1|LR134220.1_976_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IE;coding_strand=+;E-value=5.200000000000001e-44;Score=149.4;Coverage_Seq=0.7986577181208053;Coverage_Hmm=0.36923076923076925
SEQF5832.1|LR134220.1	CCTyper	CDS	1039680	1041242	521	+	.	ID=SEQF5832.1|LR134220.1_973_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cse1_0_IE;coding_strand=+;E-value=6e-184;Score=610.6;Coverage_Seq=0.9692898272552783;Coverage_Hmm=1.0
SEQF5832.1|LR134220.1	CCTyper	CDS	1041239	1041775	179	+	.	ID=SEQF5832.1|LR134220.1_974_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : Cse2_0_IE;coding_strand=+;E-value=7.700000000000001e-38;Score=128.3;Coverage_Seq=0.88268156424581;Coverage_Hmm=1.0
SEQF5832.1|LR134220.1	CCTyper	CDS	1034189	1034923	245	+	.	ID=SEQF5832.1|LR134220.1_968_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : CysH_0_IVB;coding_strand=+;E-value=5e-17;Score=60.4;Coverage_Seq=0.7551020408163265;Coverage_Hmm=0.7309236947791165
SEQF5832.1|LR134220.1	CCTyper	CDS	1047608	1048516	303	+	.	ID=SEQF5832.1|LR134220.1_982_cas;Genome_ID=SEQF5832.1;Feature_type=CDS;Product=Cas Prediction : CysH_0_IVB;coding_strand=+;E-value=1.5e-19;Score=68.6;Coverage_Seq=0.570957095709571;Coverage_Hmm=0.6827309236947792