SEQF5842.1|AP019803.1	CCTyper	repeat_region	3114781	3115355	575	+	.	ID=SEQF5842.1|AP019803.1_1;Genome_ID=SEQF5842.1;Note=Predictor:CCtyper;Start:3114781;End:3115355;Consensus_Repeat:TTTATCCCCGCTGGCGCGGGGAACAC;Number_of_Repeats:10;Repeat_Length:26;Average_Spacer_Length:35;Repeat_Identity:98.5;Spacer_Identity:44.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3114781	3114806	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT1;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGACGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3114807	3114841	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER1;Parent=SEQF5842.1|AP019803.1_1;Note=GTCAATAGGCGGCGTCCCGTAGCCGTCCCCTTCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3114842	3114867	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT2;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3114868	3114902	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER2;Parent=SEQF5842.1|AP019803.1_1;Note=GTTGAGGTCGATAAGTACGAACGGTTTCCCTGCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3114903	3114928	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT3;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3114929	3114963	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER3;Parent=SEQF5842.1|AP019803.1_1;Note=GATCGCCTGCTCCAGCGTCACTCCCTGCCCCTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3114964	3114989	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT4;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3114990	3115024	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER4;Parent=SEQF5842.1|AP019803.1_1;Note=TTCTGATACGTACTGAGGCCGGTTGTGATACGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3115025	3115050	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT5;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3115051	3115085	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER5;Parent=SEQF5842.1|AP019803.1_1;Note=TAACCCCCAATGAAGTTAATAAAGTCTATGGCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3115086	3115111	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT6;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3115112	3115146	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER6;Parent=SEQF5842.1|AP019803.1_1;Note=ATGAGATTAAAATACTCAGTACTCTTACTCGCCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3115147	3115172	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT7;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3115173	3115207	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER7;Parent=SEQF5842.1|AP019803.1_1;Note=CAGCGTGGCGCGATAAAGCAATGTGTCTGGCTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3115208	3115233	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT8;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3115234	3115268	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER8;Parent=SEQF5842.1|AP019803.1_1;Note=CAGAGGCAACCGACGCGGATTCAGTAGGAAAGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3115269	3115294	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT9;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3115295	3115329	35	+	.	ID=SEQF5842.1|AP019803.1_1_SPACER9;Parent=SEQF5842.1|AP019803.1_1;Note=CGATAGACACTTTGCGGTCATTGTCTATTCGGCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3115330	3115355	26	+	.	ID=SEQF5842.1|AP019803.1_1_REPEAT10;Parent=SEQF5842.1|AP019803.1_1;Note=TTTATCCCCGCTGGCGCGGGGAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	repeat_region	3142493	3142826	334	+	.	ID=SEQF5842.1|AP019803.1_2;Genome_ID=SEQF5842.1;Note=Predictor:CCtyper;Start:3142493;End:3142826;Consensus_Repeat:CGGTTTATCCCCGCTGGCGCGGGGAACTC;Number_of_Repeats:6;Repeat_Length:29;Average_Spacer_Length:32;Repeat_Identity:93.8;Spacer_Identity:42.4;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:1.0;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3142493	3142521	29	+	.	ID=SEQF5842.1|AP019803.1_2_REPEAT1;Parent=SEQF5842.1|AP019803.1_2;Note=TGGTTTATTCCCGCTGGTGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3142522	3142553	32	+	.	ID=SEQF5842.1|AP019803.1_2_SPACER1;Parent=SEQF5842.1|AP019803.1_2;Note=ATCAGTGATATCCAACATTGCGGAGCTAAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3142554	3142582	29	+	.	ID=SEQF5842.1|AP019803.1_2_REPEAT2;Parent=SEQF5842.1|AP019803.1_2;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3142583	3142614	32	+	.	ID=SEQF5842.1|AP019803.1_2_SPACER2;Parent=SEQF5842.1|AP019803.1_2;Note=TAATATCCCTGGCGATAATCAACCGGCTTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3142615	3142643	29	+	.	ID=SEQF5842.1|AP019803.1_2_REPEAT3;Parent=SEQF5842.1|AP019803.1_2;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3142644	3142675	32	+	.	ID=SEQF5842.1|AP019803.1_2_SPACER3;Parent=SEQF5842.1|AP019803.1_2;Note=GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3142676	3142704	29	+	.	ID=SEQF5842.1|AP019803.1_2_REPEAT4;Parent=SEQF5842.1|AP019803.1_2;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3142705	3142736	32	+	.	ID=SEQF5842.1|AP019803.1_2_SPACER4;Parent=SEQF5842.1|AP019803.1_2;Note=GCGGGTATGCTCCGCTCCGTGTTCGACAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3142737	3142765	29	+	.	ID=SEQF5842.1|AP019803.1_2_REPEAT5;Parent=SEQF5842.1|AP019803.1_2;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	binding_site	3142766	3142797	32	+	.	ID=SEQF5842.1|AP019803.1_2_SPACER5;Parent=SEQF5842.1|AP019803.1_2;Note=AAGGTCGCGGGGACGCCACGGGCAGTCAATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	direct_repeat	3142798	3142826	29	+	.	ID=SEQF5842.1|AP019803.1_2_REPEAT6;Parent=SEQF5842.1|AP019803.1_2;Note=CGGTTTATCCCCGCTGGCGCGGGGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF5842.1|AP019803.1	CCTyper	OPERON	3112499	3125359	12861	-	.	ID=SEQF5842.1|AP019803.1@35;Genome_ID=SEQF5842.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=CysH_0_IVB,Cas2_1_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas6_0_IE,Cas5_0_CAS-I-E,Cas7_0_IE,Cse2_0_IE,Cse1_0_IE,Cas3_1_CAS-I,CysH_0_IVB;Positions=2861,2863,2864,2865,2866,2867,2868,2869,2870,2872;E-values=1.50e-19,8.70e-40,7.40e-115,7.50e-86,1.30e-53,8.00e-135,8.70e-35,1.80e-183,1.60e-177,9.00e-17;CoverageSeq=0.571,0.929,0.86,0.977,0.719,0.915,0.888,0.967,0.833,0.743;CoverageHMM=0.683,1.0,0.989,0.995,0.973,1.0,1.0,0.998,0.98,0.719;Strand_Interference=-1;Strand_Adaptation=-1
SEQF5842.1|AP019803.1	CCTyper	CDS	3115742	3116665	308	-	.	ID=SEQF5842.1|AP019803.1_2864_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=7.4e-115;Score=380.9;Coverage_Seq=0.8603896103896104;Coverage_Hmm=0.9888475836431226
SEQF5842.1|AP019803.1	CCTyper	CDS	3115452	3115745	98	-	.	ID=SEQF5842.1|AP019803.1_2863_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.7e-40;Score=133.0;Coverage_Seq=0.9285714285714286;Coverage_Hmm=1.0
SEQF5842.1|AP019803.1	CCTyper	CDS	3121314	3124013	900	-	.	ID=SEQF5842.1|AP019803.1_2870_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cas3_1_CAS-I;coding_strand=-;E-value=1.6e-177;Score=590.2;Coverage_Seq=0.8333333333333334;Coverage_Hmm=0.9798657718120806
SEQF5842.1|AP019803.1	CCTyper	CDS	3117294	3118040	249	-	.	ID=SEQF5842.1|AP019803.1_2866_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_CAS-I-E;coding_strand=-;E-value=1.3e-53;Score=179.7;Coverage_Seq=0.7188755020080321;Coverage_Hmm=0.9725274725274725
SEQF5842.1|AP019803.1	CCTyper	CDS	3116662	3117312	217	-	.	ID=SEQF5842.1|AP019803.1_2865_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_IE;coding_strand=-;E-value=7.5e-86;Score=285.9;Coverage_Seq=0.9769585253456221;Coverage_Hmm=0.9951923076923077
SEQF5842.1|AP019803.1	CCTyper	CDS	3118051	3119106	352	-	.	ID=SEQF5842.1|AP019803.1_2867_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_IE;coding_strand=-;E-value=8e-135;Score=448.0;Coverage_Seq=0.9147727272727273;Coverage_Hmm=1.0
SEQF5842.1|AP019803.1	CCTyper	CDS	3119654	3121216	521	-	.	ID=SEQF5842.1|AP019803.1_2869_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cse1_0_IE;coding_strand=-;E-value=1.8e-183;Score=609.1;Coverage_Seq=0.9673704414587332;Coverage_Hmm=0.998015873015873
SEQF5842.1|AP019803.1	CCTyper	CDS	3119121	3119657	179	-	.	ID=SEQF5842.1|AP019803.1_2868_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : Cse2_0_IE;coding_strand=-;E-value=8.7e-35;Score=118.5;Coverage_Seq=0.888268156424581;Coverage_Hmm=1.0
SEQF5842.1|AP019803.1	CCTyper	CDS	3112499	3113407	303	-	.	ID=SEQF5842.1|AP019803.1_2861_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : CysH_0_IVB;coding_strand=-;E-value=1.5e-19;Score=68.9;Coverage_Seq=0.570957095709571;Coverage_Hmm=0.6827309236947792
SEQF5842.1|AP019803.1	CCTyper	CDS	3124625	3125359	245	-	.	ID=SEQF5842.1|AP019803.1_2872_cas;Genome_ID=SEQF5842.1;Feature_type=CDS;Product=Cas Prediction : CysH_0_IVB;coding_strand=-;E-value=9e-17;Score=59.7;Coverage_Seq=0.7428571428571429;Coverage_Hmm=0.7188755020080321