SEQF6126.1|LR962063.1	CCTyper	repeat_region	1503251	1504142	892	+	.	ID=SEQF6126.1|LR962063.1_1;Genome_ID=SEQF6126.1;Note=Predictor:CCtyper;Start:1503251;End:1504142;Consensus_Repeat:GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Number_of_Repeats:14;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:90.3;Spacer_Identity:40.6;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503251	1503286	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT1;Parent=SEQF6126.1|LR962063.1_1;Note=GATGGCTTTTTTGAAAATTATTTGGGGTATAAAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503287	1503316	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER1;Parent=SEQF6126.1|LR962063.1_1;Note=GAGTTTGTACATCCAACCTACTTCCTTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503317	1503352	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT2;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGGTAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503353	1503382	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER2;Parent=SEQF6126.1|LR962063.1_1;Note=CATGGACTGCAACAACTTACGACGACACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503383	1503418	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT3;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503419	1503448	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER3;Parent=SEQF6126.1|LR962063.1_1;Note=CTTCCGATACTAGTTTAAAGCAATGGAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503449	1503484	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT4;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503485	1503514	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER4;Parent=SEQF6126.1|LR962063.1_1;Note=CATTATATTCAATGGTATAAGGTATCGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503515	1503550	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT5;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503551	1503579	29	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER5;Parent=SEQF6126.1|LR962063.1_1;Note=CCAGAGCTAACAACCGAAAAAGAGAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503580	1503615	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT6;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503616	1503645	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER6;Parent=SEQF6126.1|LR962063.1_1;Note=TCTCTAAGAAGCCGTTCTTTCTCGTGATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503646	1503681	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT7;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503682	1503711	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER7;Parent=SEQF6126.1|LR962063.1_1;Note=TTGTTAAAACCAACACCAAATGAACGAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503712	1503747	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT8;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503748	1503777	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER8;Parent=SEQF6126.1|LR962063.1_1;Note=TATCTTTAATAGTTTCTAAATCTGGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503778	1503813	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT9;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503814	1503842	29	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER9;Parent=SEQF6126.1|LR962063.1_1;Note=TGGTTAAAAAGGAAGCCATCAAAGAGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503843	1503878	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT10;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503879	1503908	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER10;Parent=SEQF6126.1|LR962063.1_1;Note=TGGTTGCCGTCAGCACCATCAAGAGGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503909	1503944	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT11;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1503945	1503974	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER11;Parent=SEQF6126.1|LR962063.1_1;Note=TTTGAAAGACCAAGAATAACTGGTACATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1503975	1504010	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT12;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1504011	1504040	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER12;Parent=SEQF6126.1|LR962063.1_1;Note=AAAAGAAATTGAAGCATTGAAGGAAAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1504041	1504076	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT13;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1504077	1504106	30	+	.	ID=SEQF6126.1|LR962063.1_1_SPACER13;Parent=SEQF6126.1|LR962063.1_1;Note=AGGTTAAACGCTATTTCTTCGATAGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1504107	1504142	36	+	.	ID=SEQF6126.1|LR962063.1_1_REPEAT14;Parent=SEQF6126.1|LR962063.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	repeat_region	1645807	1646172	366	+	.	ID=SEQF6126.1|LR962063.1_2;Genome_ID=SEQF6126.1;Note=Predictor:CCtyper;Start:1645807;End:1646172;Consensus_Repeat:GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:87.9;Spacer_Identity:37.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1645807	1645842	36	+	.	ID=SEQF6126.1|LR962063.1_2_REPEAT1;Parent=SEQF6126.1|LR962063.1_2;Note=GTGATAGTTTGTTTTTTAACAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1645843	1645872	30	+	.	ID=SEQF6126.1|LR962063.1_2_SPACER1;Parent=SEQF6126.1|LR962063.1_2;Note=AGGGGAGAAAAAGCCAAATCAAAAAAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1645873	1645908	36	+	.	ID=SEQF6126.1|LR962063.1_2_REPEAT2;Parent=SEQF6126.1|LR962063.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1645909	1645938	30	+	.	ID=SEQF6126.1|LR962063.1_2_SPACER2;Parent=SEQF6126.1|LR962063.1_2;Note=AACGGTTGGCTTGTTGATTTAAAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1645939	1645974	36	+	.	ID=SEQF6126.1|LR962063.1_2_REPEAT3;Parent=SEQF6126.1|LR962063.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1645975	1646004	30	+	.	ID=SEQF6126.1|LR962063.1_2_SPACER3;Parent=SEQF6126.1|LR962063.1_2;Note=GAAACCTTTTTTTGCGTTTGATATTTCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1646005	1646040	36	+	.	ID=SEQF6126.1|LR962063.1_2_REPEAT4;Parent=SEQF6126.1|LR962063.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1646041	1646070	30	+	.	ID=SEQF6126.1|LR962063.1_2_SPACER4;Parent=SEQF6126.1|LR962063.1_2;Note=ATTGAATCTGGCCAGCTGGCGCTAATTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1646071	1646106	36	+	.	ID=SEQF6126.1|LR962063.1_2_REPEAT5;Parent=SEQF6126.1|LR962063.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	binding_site	1646107	1646136	30	+	.	ID=SEQF6126.1|LR962063.1_2_SPACER5;Parent=SEQF6126.1|LR962063.1_2;Note=TGATGTCCTGCATCGGAATCTAAAATTCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	direct_repeat	1646137	1646172	36	+	.	ID=SEQF6126.1|LR962063.1_2_REPEAT6;Parent=SEQF6126.1|LR962063.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6126.1|LR962063.1	CCTyper	OPERON	1504220	1512187	7968	-	.	ID=SEQF6126.1|LR962063.1@34;Genome_ID=SEQF6126.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,AbiEii_0_CAS-III;Positions=1411,1412,1413,1414,1416;E-values=8.50e-115,5.90e-28,3.50e-86,1.70e-129,9.50e-05;CoverageSeq=0.972,0.97,0.902,0.666,0.437;CoverageHMM=0.997,0.836,0.996,0.954,0.327;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6126.1|LR962063.1	CCTyper	CDS	1511501	1512187	229	-	.	ID=SEQF6126.1|LR962063.1_1416_cas;Genome_ID=SEQF6126.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=9.5e-05;Score=19.3;Coverage_Seq=0.4366812227074236;Coverage_Hmm=0.3274647887323944
SEQF6126.1|LR962063.1	CCTyper	CDS	1505598	1506512	305	-	.	ID=SEQF6126.1|LR962063.1_1413_cas;Genome_ID=SEQF6126.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.5e-86;Score=286.0;Coverage_Seq=0.9016393442622951;Coverage_Hmm=0.9963636363636363
SEQF6126.1|LR962063.1	CCTyper	CDS	1505278	1505577	100	-	.	ID=SEQF6126.1|LR962063.1_1412_cas;Genome_ID=SEQF6126.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=5.9e-28;Score=94.7;Coverage_Seq=0.97;Coverage_Hmm=0.8362068965517241
SEQF6126.1|LR962063.1	CCTyper	CDS	1506724	1510176	1151	-	.	ID=SEQF6126.1|LR962063.1_1414_cas;Genome_ID=SEQF6126.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.6999999999999997e-129;Score=430.8;Coverage_Seq=0.6655082536924414;Coverage_Hmm=0.9542168674698795
SEQF6126.1|LR962063.1	CCTyper	CDS	1504220	1505278	353	-	.	ID=SEQF6126.1|LR962063.1_1411_cas;Genome_ID=SEQF6126.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=8.5e-115;Score=380.6;Coverage_Seq=0.9716713881019831;Coverage_Hmm=0.9970845481049563