SEQF6136.1|LR962171.1	CCTyper	repeat_region	1615082	1616041	960	+	.	ID=SEQF6136.1|LR962171.1_1;Genome_ID=SEQF6136.1;Note=Predictor:CCtyper;Start:1615082;End:1616041;Consensus_Repeat:GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:92.0;Spacer_Identity:40.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615082	1615117	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT1;Parent=SEQF6136.1|LR962171.1_1;Note=GATGGCTTTTTTGAAAATTATTGGGAGTATAAAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615118	1615147	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER1;Parent=SEQF6136.1|LR962171.1_1;Note=GAGTTCGTACATCCAACCTACTTCATTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615148	1615183	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT2;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615184	1615213	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER2;Parent=SEQF6136.1|LR962171.1_1;Note=AGAGCTGACAAATGAAGTGTTACTTTCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615214	1615249	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT3;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615250	1615279	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER3;Parent=SEQF6136.1|LR962171.1_1;Note=ATAAGCACGGCCACTTTCACCAGCAATTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615280	1615315	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT4;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615316	1615345	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER4;Parent=SEQF6136.1|LR962171.1_1;Note=CAATAGAGAAAAAATGATAGACAAGCTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615346	1615381	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT5;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615382	1615411	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER5;Parent=SEQF6136.1|LR962171.1_1;Note=TGTCGTTGAATAATCATCTTCTGAAATATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615412	1615447	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT6;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615448	1615477	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER6;Parent=SEQF6136.1|LR962171.1_1;Note=ACAAGAGATAGGATCGCCACATTGCTTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615478	1615513	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT7;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615514	1615543	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER7;Parent=SEQF6136.1|LR962171.1_1;Note=TTGGAATGCGGTAGGTTGGAAAGTGATTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615544	1615579	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT8;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615580	1615609	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER8;Parent=SEQF6136.1|LR962171.1_1;Note=ACTAAGCTTGGAGGGATGCTCATGTATTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615610	1615645	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT9;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615646	1615675	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER9;Parent=SEQF6136.1|LR962171.1_1;Note=AAGAGGTATAAAAAGTGTAATAAATGGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615676	1615711	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT10;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615712	1615741	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER10;Parent=SEQF6136.1|LR962171.1_1;Note=TTCTTTTCAGCTTTTCCATTCCACGTTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615742	1615777	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT11;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615778	1615807	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER11;Parent=SEQF6136.1|LR962171.1_1;Note=AGCAATGCTAAAAAAAATTGTAGAAACCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615808	1615843	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT12;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615844	1615873	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER12;Parent=SEQF6136.1|LR962171.1_1;Note=TTGTTGCTAGGAATATAGTCTTGGTGTGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615874	1615909	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT13;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615910	1615939	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER13;Parent=SEQF6136.1|LR962171.1_1;Note=AAACTTGTTTGTAAAACATTAACGTCAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1615940	1615975	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT14;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	binding_site	1615976	1616005	30	+	.	ID=SEQF6136.1|LR962171.1_1_SPACER14;Parent=SEQF6136.1|LR962171.1_1;Note=ATTGTTGGTTTCTTAGTGTAATAAAAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	direct_repeat	1616006	1616041	36	+	.	ID=SEQF6136.1|LR962171.1_1_REPEAT15;Parent=SEQF6136.1|LR962171.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6136.1|LR962171.1	CCTyper	OPERON	1616119	1624085	7967	-	.	ID=SEQF6136.1|LR962171.1@40;Genome_ID=SEQF6136.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,AbiEii_0_CAS-III;Positions=1508,1509,1510,1511,1512,1515;E-values=6.10e-55,4.10e-54,8.20e-28,1.70e-86,3.20e-108,1.10e-04;CoverageSeq=0.956,0.947,0.96,0.902,0.69,0.437;CoverageHMM=0.501,0.475,0.828,0.996,0.837,0.327;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6136.1|LR962171.1	CCTyper	CDS	1623399	1624085	229	-	.	ID=SEQF6136.1|LR962171.1_1515_cas;Genome_ID=SEQF6136.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=0.00011;Score=19.3;Coverage_Seq=0.4366812227074236;Coverage_Hmm=0.3274647887323944
SEQF6136.1|LR962171.1	CCTyper	CDS	1617496	1618410	305	-	.	ID=SEQF6136.1|LR962171.1_1511_cas;Genome_ID=SEQF6136.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.7e-86;Score=287.2;Coverage_Seq=0.9016393442622951;Coverage_Hmm=0.9963636363636363
SEQF6136.1|LR962171.1	CCTyper	CDS	1617176	1617475	100	-	.	ID=SEQF6136.1|LR962171.1_1510_cas;Genome_ID=SEQF6136.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.2e-28;Score=94.4;Coverage_Seq=0.96;Coverage_Hmm=0.8275862068965517
SEQF6136.1|LR962171.1	CCTyper	CDS	1618621	1621887	1089	-	.	ID=SEQF6136.1|LR962171.1_1512_cas;Genome_ID=SEQF6136.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=3.2e-108;Score=360.6;Coverage_Seq=0.689623507805326;Coverage_Hmm=0.8373493975903614
SEQF6136.1|LR962171.1	CCTyper	CDS	1616119	1616664	182	-	.	ID=SEQF6136.1|LR962171.1_1508_cas;Genome_ID=SEQF6136.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=6.0999999999999994e-55;Score=183.9;Coverage_Seq=0.9560439560439561;Coverage_Hmm=0.5014577259475219
SEQF6136.1|LR962171.1	CCTyper	CDS	1616667	1617176	170	-	.	ID=SEQF6136.1|LR962171.1_1509_cas;Genome_ID=SEQF6136.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=4.1e-54;Score=181.2;Coverage_Seq=0.9470588235294117;Coverage_Hmm=0.4752186588921283