SEQF6137.1|LR962771.1	CCTyper	repeat_region	561784	562283	500	+	.	ID=SEQF6137.1|LR962771.1_1;Genome_ID=SEQF6137.1;Note=Predictor:CCtyper;Start:561784;End:562283;Consensus_Repeat:GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Number_of_Repeats:8;Repeat_Length:36;Average_Spacer_Length:30.3;Repeat_Identity:92.7;Spacer_Identity:41.3;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	561784	561819	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT1;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	561820	561851	32	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER1;Parent=SEQF6137.1|LR962771.1_1;Note=ACTGCTCATTCGTTTTCTCCTCCTAACACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	561852	561887	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT2;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	561888	561917	30	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER2;Parent=SEQF6137.1|LR962771.1_1;Note=CAGCGCCGGAAAAGTAGCAAGCCCCACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	561918	561953	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT3;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	561954	561983	30	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER3;Parent=SEQF6137.1|LR962771.1_1;Note=ACGTGCCTTCAAATCCAAAAAAGGTTTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	561984	562019	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT4;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	562020	562049	30	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER4;Parent=SEQF6137.1|LR962771.1_1;Note=AGGTACAATTTATGGATTGTCACATGTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	562050	562085	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT5;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	562086	562115	30	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER5;Parent=SEQF6137.1|LR962771.1_1;Note=TGATGAAAACCGATGGTATTTACTTTCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	562116	562151	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT6;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	562152	562181	30	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER6;Parent=SEQF6137.1|LR962771.1_1;Note=CTCGTTAGAATGCCCTTCACAGCTGTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	562182	562217	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT7;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	562218	562247	30	+	.	ID=SEQF6137.1|LR962771.1_1_SPACER7;Parent=SEQF6137.1|LR962771.1_1;Note=TCTAATGAGCATTCATTACATATGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	562248	562283	36	+	.	ID=SEQF6137.1|LR962771.1_1_REPEAT8;Parent=SEQF6137.1|LR962771.1_1;Note=GTTTTAGAGTCATGTTGTTTAGTTTTCGCAAATACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	repeat_region	1854491	1855120	630	+	.	ID=SEQF6137.1|LR962771.1_2;Genome_ID=SEQF6137.1;Note=Predictor:CCtyper;Start:1854491;End:1855120;Consensus_Repeat:GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:100.0;Spacer_Identity:39.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854491	1854526	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT1;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854527	1854556	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER1;Parent=SEQF6137.1|LR962771.1_2;Note=TGTTTTTAATATTGCCGTCTTTTAAATAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854557	1854592	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT2;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854593	1854622	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER2;Parent=SEQF6137.1|LR962771.1_2;Note=TTGATTGGAGCTCCAACATGGGACGGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854623	1854658	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT3;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854659	1854688	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER3;Parent=SEQF6137.1|LR962771.1_2;Note=AAGCAAGAATAGTAAGAACTACAAAAATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854689	1854724	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT4;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854725	1854754	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER4;Parent=SEQF6137.1|LR962771.1_2;Note=GGTCTTTTTTTCTTGTTCTAAATTTTGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854755	1854790	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT5;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854791	1854820	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER5;Parent=SEQF6137.1|LR962771.1_2;Note=GATAAGTATTACACATCAAAAAAATGCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854821	1854856	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT6;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854857	1854886	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER6;Parent=SEQF6137.1|LR962771.1_2;Note=TTCTTAGAACGCTATTCGGAACGCTTTAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854887	1854922	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT7;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854923	1854952	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER7;Parent=SEQF6137.1|LR962771.1_2;Note=TTACTTTCTTGATAGATTCTTTAGCCTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1854953	1854988	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT8;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1854989	1855018	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER8;Parent=SEQF6137.1|LR962771.1_2;Note=GCATCAATCAAAATTCCCTCAATCACATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1855019	1855054	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT9;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	binding_site	1855055	1855084	30	+	.	ID=SEQF6137.1|LR962771.1_2_SPACER9;Parent=SEQF6137.1|LR962771.1_2;Note=GAAGATGGTAGCGAAGTTATTGTAAATCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	direct_repeat	1855085	1855120	36	+	.	ID=SEQF6137.1|LR962771.1_2_REPEAT10;Parent=SEQF6137.1|LR962771.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6137.1|LR962771.1	CCTyper	OPERON	555824	565303	9480	+	.	ID=SEQF6137.1|LR962771.1@12;Genome_ID=SEQF6137.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,AbiEii_0_CAS-III;Positions=529,530,531,532,534;E-values=0.00e+00,1.60e-97,2.20e-47,4.20e-107,2.20e-04;CoverageSeq=0.998,0.931,0.982,0.991,0.406;CoverageHMM=0.998,0.996,0.957,1.0,0.447;Strand_Interference=1;Strand_Adaptation=1
SEQF6137.1|LR962771.1	CCTyper	CDS	564350	565303	318	+	.	ID=SEQF6137.1|LR962771.1_534_cas;Genome_ID=SEQF6137.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=0.00022;Score=18.1;Coverage_Seq=0.4056603773584906;Coverage_Hmm=0.4471830985915493
SEQF6137.1|LR962771.1	CCTyper	CDS	559838	560704	289	+	.	ID=SEQF6137.1|LR962771.1_530_cas;Genome_ID=SEQF6137.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-97;Score=323.2;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6137.1|LR962771.1	CCTyper	CDS	560701	561030	110	+	.	ID=SEQF6137.1|LR962771.1_531_cas;Genome_ID=SEQF6137.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.1999999999999997e-47;Score=157.4;Coverage_Seq=0.9818181818181818;Coverage_Hmm=0.9568965517241379
SEQF6137.1|LR962771.1	CCTyper	CDS	555824	559837	1338	+	.	ID=SEQF6137.1|LR962771.1_529_cas;Genome_ID=SEQF6137.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1132.2;Coverage_Seq=0.9977578475336323;Coverage_Hmm=0.9982142857142857
SEQF6137.1|LR962771.1	CCTyper	CDS	561031	561690	220	+	.	ID=SEQF6137.1|LR962771.1_532_cas;Genome_ID=SEQF6137.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=4.2e-107;Score=354.0;Coverage_Seq=0.990909090909091;Coverage_Hmm=1.0