SEQF6152.1|LR962542.1	CCTyper	repeat_region	1560692	1561716	1025	+	.	ID=SEQF6152.1|LR962542.1_1;Genome_ID=SEQF6152.1;Note=Predictor:CCtyper;Start:1560692;End:1561716;Consensus_Repeat:GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Number_of_Repeats:16;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:98.9;Spacer_Identity:42.8;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1560692	1560727	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT1;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1560728	1560757	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER1;Parent=SEQF6152.1|LR962542.1_1;Note=AATTTCAGATTACGAATTAACAGAAATAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1560758	1560793	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT2;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAATACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1560794	1560823	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER2;Parent=SEQF6152.1|LR962542.1_1;Note=GCTTCGGCAATGGTTACATCAGCAGTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1560824	1560859	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT3;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1560860	1560889	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER3;Parent=SEQF6152.1|LR962542.1_1;Note=CTACCTGCATTTTTAAAGGAATGAGCGTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1560890	1560925	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT4;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1560926	1560954	29	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER4;Parent=SEQF6152.1|LR962542.1_1;Note=ATTACCCGTTTCATCGATTTTTACAGGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1560955	1560990	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT5;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1560991	1561020	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER5;Parent=SEQF6152.1|LR962542.1_1;Note=TATACCGCTTATTTAGAATTTGCCACATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561021	1561056	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT6;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561057	1561086	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER6;Parent=SEQF6152.1|LR962542.1_1;Note=AGTCGCTACATCGCCAAGAAGCTTATTTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561087	1561122	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT7;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561123	1561152	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER7;Parent=SEQF6152.1|LR962542.1_1;Note=ATTATCAGATGCTAAACGTAATGCAGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561153	1561188	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT8;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561189	1561218	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER8;Parent=SEQF6152.1|LR962542.1_1;Note=TGCGGTTAAAGCAAGCGATTCGGATATATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561219	1561254	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT9;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561255	1561284	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER9;Parent=SEQF6152.1|LR962542.1_1;Note=TAAGATGGCAGAAAACCCAAAGGACCGCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561285	1561320	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT10;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561321	1561350	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER10;Parent=SEQF6152.1|LR962542.1_1;Note=ATACATTTCAAGTCAACATACTCAAAAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561351	1561386	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT11;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561387	1561416	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER11;Parent=SEQF6152.1|LR962542.1_1;Note=AATCTTCTCATTTGTATTCCTCCAAAAGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561417	1561452	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT12;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561453	1561482	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER12;Parent=SEQF6152.1|LR962542.1_1;Note=TGTAATTAGAAGAATAAAGAGCTGTATCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561483	1561518	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT13;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561519	1561548	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER13;Parent=SEQF6152.1|LR962542.1_1;Note=CTTTCAAAAGAAAATAATTGATTCAATTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561549	1561584	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT14;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561585	1561614	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER14;Parent=SEQF6152.1|LR962542.1_1;Note=CACTATTTGGGGAGACGAGCGTGACGAGCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561615	1561650	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT15;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	binding_site	1561651	1561680	30	+	.	ID=SEQF6152.1|LR962542.1_1_SPACER15;Parent=SEQF6152.1|LR962542.1_1;Note=CGAAGAAGAGGAGAATGAATGATGGGGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	direct_repeat	1561681	1561716	36	+	.	ID=SEQF6152.1|LR962542.1_1_REPEAT16;Parent=SEQF6152.1|LR962542.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6152.1|LR962542.1	CCTyper	OPERON	1561794	1569654	7861	-	.	ID=SEQF6152.1|LR962542.1@32;Genome_ID=SEQF6152.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,AbiEii_0_CAS-III;Positions=1484,1485,1487,1488,1490;E-values=9.30e-115,6.50e-28,1.10e-68,8.10e-129,1.00e-04;CoverageSeq=0.972,0.97,0.955,0.714,0.437;CoverageHMM=0.997,0.836,0.775,0.952,0.327;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6152.1|LR962542.1	CCTyper	CDS	1568968	1569654	229	-	.	ID=SEQF6152.1|LR962542.1_1490_cas;Genome_ID=SEQF6152.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=0.0001;Score=19.3;Coverage_Seq=0.4366812227074236;Coverage_Hmm=0.3274647887323944
SEQF6152.1|LR962542.1	CCTyper	CDS	1563311	1563979	223	-	.	ID=SEQF6152.1|LR962542.1_1487_cas;Genome_ID=SEQF6152.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-68;Score=228.7;Coverage_Seq=0.9551569506726457;Coverage_Hmm=0.7745454545454545
SEQF6152.1|LR962542.1	CCTyper	CDS	1562852	1563151	100	-	.	ID=SEQF6152.1|LR962542.1_1485_cas;Genome_ID=SEQF6152.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.5e-28;Score=94.7;Coverage_Seq=0.97;Coverage_Hmm=0.8362068965517241
SEQF6152.1|LR962542.1	CCTyper	CDS	1564191	1567643	1151	-	.	ID=SEQF6152.1|LR962542.1_1488_cas;Genome_ID=SEQF6152.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=8.1e-129;Score=428.7;Coverage_Seq=0.7141615986099045;Coverage_Hmm=0.9518072289156626
SEQF6152.1|LR962542.1	CCTyper	CDS	1561794	1562852	353	-	.	ID=SEQF6152.1|LR962542.1_1484_cas;Genome_ID=SEQF6152.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=9.3e-115;Score=380.6;Coverage_Seq=0.9716713881019831;Coverage_Hmm=0.9970845481049563