SEQF6156.1|LR961966.1	CCTyper	repeat_region	1551777	1552602	826	+	.	ID=SEQF6156.1|LR961966.1_1;Genome_ID=SEQF6156.1;Note=Predictor:CCtyper;Start:1551777;End:1552602;Consensus_Repeat:GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Number_of_Repeats:13;Repeat_Length:36;Average_Spacer_Length:29.8;Repeat_Identity:98.9;Spacer_Identity:40.1;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.996;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1551777	1551812	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT1;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGGTAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1551813	1551842	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER1;Parent=SEQF6156.1|LR961966.1_1;Note=CATGGACTGCAACAACTTACGACGACACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1551843	1551878	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT2;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1551879	1551908	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER2;Parent=SEQF6156.1|LR961966.1_1;Note=CTTCCGATACTAGTTTAAAGCAATGGAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1551909	1551944	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT3;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1551945	1551974	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER3;Parent=SEQF6156.1|LR961966.1_1;Note=CATTATATTCAATGGTATAAGGTATCGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1551975	1552010	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT4;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552011	1552039	29	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER4;Parent=SEQF6156.1|LR961966.1_1;Note=CCAGAGCTAACAACCGAAAAAGAGAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552040	1552075	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT5;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552076	1552105	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER5;Parent=SEQF6156.1|LR961966.1_1;Note=TCTCTAAGAAGCCGTTCTTTCTCGTGATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552106	1552141	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT6;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552142	1552171	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER6;Parent=SEQF6156.1|LR961966.1_1;Note=TTGTTAAAACCAACACCAAATGAACGAGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552172	1552207	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT7;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552208	1552237	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER7;Parent=SEQF6156.1|LR961966.1_1;Note=TATCTTTAATAGTTTCTAAATCTGGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552238	1552273	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT8;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552274	1552302	29	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER8;Parent=SEQF6156.1|LR961966.1_1;Note=TGGTTAAAAAGGAAGCCATCAAAGAGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552303	1552338	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT9;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552339	1552368	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER9;Parent=SEQF6156.1|LR961966.1_1;Note=TGGTTGCCGTCAGCACCATCAAGAGGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552369	1552404	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT10;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552405	1552434	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER10;Parent=SEQF6156.1|LR961966.1_1;Note=TTTGAAAGACCAAGAATAACTGGTACATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552435	1552470	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT11;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552471	1552500	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER11;Parent=SEQF6156.1|LR961966.1_1;Note=AAAAGAAATTGAAGCATTGAAGGAAAAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552501	1552536	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT12;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1552537	1552566	30	+	.	ID=SEQF6156.1|LR961966.1_1_SPACER12;Parent=SEQF6156.1|LR961966.1_1;Note=AGGTTAAACGCTATTTCTTCGATAGTACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1552567	1552602	36	+	.	ID=SEQF6156.1|LR961966.1_1_REPEAT13;Parent=SEQF6156.1|LR961966.1_1;Note=GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	repeat_region	1694266	1694631	366	+	.	ID=SEQF6156.1|LR961966.1_2;Genome_ID=SEQF6156.1;Note=Predictor:CCtyper;Start:1694266;End:1694631;Consensus_Repeat:GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Number_of_Repeats:6;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:87.9;Spacer_Identity:37.5;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1694266	1694301	36	+	.	ID=SEQF6156.1|LR961966.1_2_REPEAT1;Parent=SEQF6156.1|LR961966.1_2;Note=GTGATAGTTTGTTTTTTAACAACATGGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1694302	1694331	30	+	.	ID=SEQF6156.1|LR961966.1_2_SPACER1;Parent=SEQF6156.1|LR961966.1_2;Note=AGGGGAGAAAAAGCCAAATCAAAAAAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1694332	1694367	36	+	.	ID=SEQF6156.1|LR961966.1_2_REPEAT2;Parent=SEQF6156.1|LR961966.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1694368	1694397	30	+	.	ID=SEQF6156.1|LR961966.1_2_SPACER2;Parent=SEQF6156.1|LR961966.1_2;Note=AACGGTTGGCTTGTTGATTTAAAATTTAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1694398	1694433	36	+	.	ID=SEQF6156.1|LR961966.1_2_REPEAT3;Parent=SEQF6156.1|LR961966.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1694434	1694463	30	+	.	ID=SEQF6156.1|LR961966.1_2_SPACER3;Parent=SEQF6156.1|LR961966.1_2;Note=GAAACCTTTTTTTGCGTTTGATATTTCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1694464	1694499	36	+	.	ID=SEQF6156.1|LR961966.1_2_REPEAT4;Parent=SEQF6156.1|LR961966.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1694500	1694529	30	+	.	ID=SEQF6156.1|LR961966.1_2_SPACER4;Parent=SEQF6156.1|LR961966.1_2;Note=ATTGAATCTGGCCAGCTGGCGCTAATTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1694530	1694565	36	+	.	ID=SEQF6156.1|LR961966.1_2_REPEAT5;Parent=SEQF6156.1|LR961966.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	binding_site	1694566	1694595	30	+	.	ID=SEQF6156.1|LR961966.1_2_SPACER5;Parent=SEQF6156.1|LR961966.1_2;Note=TGATGTCCTGCATCGGAATCTAAAATTCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	direct_repeat	1694596	1694631	36	+	.	ID=SEQF6156.1|LR961966.1_2_REPEAT6;Parent=SEQF6156.1|LR961966.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6156.1|LR961966.1	CCTyper	OPERON	1552680	1560647	7968	-	.	ID=SEQF6156.1|LR961966.1@33;Genome_ID=SEQF6156.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_2_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_0_II,AbiEii_0_CAS-III;Positions=1489,1490,1491,1492,1494;E-values=8.80e-115,6.10e-28,3.70e-86,1.70e-129,9.80e-05;CoverageSeq=0.972,0.97,0.902,0.666,0.437;CoverageHMM=0.997,0.836,0.996,0.954,0.327;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6156.1|LR961966.1	CCTyper	CDS	1559961	1560647	229	-	.	ID=SEQF6156.1|LR961966.1_1494_cas;Genome_ID=SEQF6156.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=9.8e-05;Score=19.3;Coverage_Seq=0.4366812227074236;Coverage_Hmm=0.3274647887323944
SEQF6156.1|LR961966.1	CCTyper	CDS	1554058	1554972	305	-	.	ID=SEQF6156.1|LR961966.1_1491_cas;Genome_ID=SEQF6156.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.7e-86;Score=286.0;Coverage_Seq=0.9016393442622951;Coverage_Hmm=0.9963636363636363
SEQF6156.1|LR961966.1	CCTyper	CDS	1553738	1554037	100	-	.	ID=SEQF6156.1|LR961966.1_1490_cas;Genome_ID=SEQF6156.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.100000000000001e-28;Score=94.7;Coverage_Seq=0.97;Coverage_Hmm=0.8362068965517241
SEQF6156.1|LR961966.1	CCTyper	CDS	1555184	1558636	1151	-	.	ID=SEQF6156.1|LR961966.1_1492_cas;Genome_ID=SEQF6156.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=-;E-value=1.6999999999999997e-129;Score=430.8;Coverage_Seq=0.6655082536924414;Coverage_Hmm=0.9542168674698795
SEQF6156.1|LR961966.1	CCTyper	CDS	1552680	1553738	353	-	.	ID=SEQF6156.1|LR961966.1_1489_cas;Genome_ID=SEQF6156.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=-;E-value=8.8e-115;Score=380.6;Coverage_Seq=0.9716713881019831;Coverage_Hmm=0.9970845481049563