SEQF6158.1|CP071176.1	CCTyper	repeat_region	416459	417090	632	+	.	ID=SEQF6158.1|CP071176.1_1;Genome_ID=SEQF6158.1;Note=Predictor:CCtyper;Start:416459;End:417090;Consensus_Repeat:GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Number_of_Repeats:10;Repeat_Length:36;Average_Spacer_Length:30.2;Repeat_Identity:94.2;Spacer_Identity:41.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416459	416494	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT1;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416495	416526	32	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER1;Parent=SEQF6158.1|CP071176.1_1;Note=ACTGCTCATTCGTTTTCTCCTCCTAACACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416527	416562	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT2;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416563	416592	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER2;Parent=SEQF6158.1|CP071176.1_1;Note=CAGCGCCGGAAAAGTAGCAAGCCCCACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416593	416628	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT3;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416629	416658	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER3;Parent=SEQF6158.1|CP071176.1_1;Note=ACGTGCCTTCAAATCCAAAAAAGGTTTGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416659	416694	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT4;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416695	416724	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER4;Parent=SEQF6158.1|CP071176.1_1;Note=TGTTTTAAATTCATACATAACGAAACATGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416725	416760	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT5;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416761	416790	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER5;Parent=SEQF6158.1|CP071176.1_1;Note=TTAGAAAAGACGTGACAGAGCAAACAGCGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416791	416826	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT6;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416827	416856	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER6;Parent=SEQF6158.1|CP071176.1_1;Note=AGGTACAATTTATGGATTGTCACATGTCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416857	416892	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT7;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416893	416922	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER7;Parent=SEQF6158.1|CP071176.1_1;Note=TGATGAAAACCGATGGTATTTACTTTCACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416923	416958	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT8;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	416959	416988	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER8;Parent=SEQF6158.1|CP071176.1_1;Note=CTCGTTAGAATGCCCTTCACAGCTGTTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	416989	417024	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT9;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	417025	417054	30	+	.	ID=SEQF6158.1|CP071176.1_1_SPACER9;Parent=SEQF6158.1|CP071176.1_1;Note=TCTAATGAGCATTCATTACATATGTAGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	417055	417090	36	+	.	ID=SEQF6158.1|CP071176.1_1_REPEAT10;Parent=SEQF6158.1|CP071176.1_1;Note=GTTTTAGAGTCATGTTGTTTAGTTTTCGCAAATACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	repeat_region	1704425	1704856	432	+	.	ID=SEQF6158.1|CP071176.1_2;Genome_ID=SEQF6158.1;Note=Predictor:CCtyper;Start:1704425;End:1704856;Consensus_Repeat:GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Number_of_Repeats:7;Repeat_Length:36;Average_Spacer_Length:30.0;Repeat_Identity:88.6;Spacer_Identity:38.3;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.999;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704425	1704460	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT1;Parent=SEQF6158.1|CP071176.1_2;Note=GTGATAGTTTGTTTTTTAACAACATGGCTATAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	1704461	1704490	30	+	.	ID=SEQF6158.1|CP071176.1_2_SPACER1;Parent=SEQF6158.1|CP071176.1_2;Note=AGGGGAGAAAAAGCCAAATCAAAAAAGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704491	1704526	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT2;Parent=SEQF6158.1|CP071176.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	1704527	1704556	30	+	.	ID=SEQF6158.1|CP071176.1_2_SPACER2;Parent=SEQF6158.1|CP071176.1_2;Note=TGTTTTTAATATTGCCGTCTTTTAAATAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704557	1704592	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT3;Parent=SEQF6158.1|CP071176.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	1704593	1704622	30	+	.	ID=SEQF6158.1|CP071176.1_2_SPACER3;Parent=SEQF6158.1|CP071176.1_2;Note=TTGATTGGAGCTCCAACATGGGACGGTCGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704623	1704658	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT4;Parent=SEQF6158.1|CP071176.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	1704659	1704688	30	+	.	ID=SEQF6158.1|CP071176.1_2_SPACER4;Parent=SEQF6158.1|CP071176.1_2;Note=AAGCAAGAATAGTAAGAACTACAAAAATGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704689	1704724	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT5;Parent=SEQF6158.1|CP071176.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	1704725	1704754	30	+	.	ID=SEQF6158.1|CP071176.1_2_SPACER5;Parent=SEQF6158.1|CP071176.1_2;Note=GCATCAATCAAAATTCCCTCAATCACATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704755	1704790	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT6;Parent=SEQF6158.1|CP071176.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	binding_site	1704791	1704820	30	+	.	ID=SEQF6158.1|CP071176.1_2_SPACER6;Parent=SEQF6158.1|CP071176.1_2;Note=GAAGATGGTAGCGAAGTTATTGTAAATCCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	direct_repeat	1704821	1704856	36	+	.	ID=SEQF6158.1|CP071176.1_2_REPEAT7;Parent=SEQF6158.1|CP071176.1_2;Note=GTTTTGGTACCATTCTAAACAACATGACTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6158.1|CP071176.1	CCTyper	OPERON	410499	420110	9612	+	.	ID=SEQF6158.1|CP071176.1@7;Genome_ID=SEQF6158.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A,AbiEii_0_CAS-III;Positions=402,403,404,405,407;E-values=0.00e+00,1.60e-97,2.10e-47,4.10e-107,2.20e-04;CoverageSeq=0.998,0.931,0.982,0.991,0.406;CoverageHMM=0.998,0.996,0.957,1.0,0.447;Strand_Interference=1;Strand_Adaptation=1
SEQF6158.1|CP071176.1	CCTyper	CDS	419157	420110	318	+	.	ID=SEQF6158.1|CP071176.1_407_cas;Genome_ID=SEQF6158.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=+;E-value=0.00022;Score=18.1;Coverage_Seq=0.4056603773584906;Coverage_Hmm=0.4471830985915493
SEQF6158.1|CP071176.1	CCTyper	CDS	414513	415379	289	+	.	ID=SEQF6158.1|CP071176.1_403_cas;Genome_ID=SEQF6158.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.6e-97;Score=323.2;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6158.1|CP071176.1	CCTyper	CDS	415376	415705	110	+	.	ID=SEQF6158.1|CP071176.1_404_cas;Genome_ID=SEQF6158.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2.0999999999999998e-47;Score=157.4;Coverage_Seq=0.9818181818181818;Coverage_Hmm=0.9568965517241379
SEQF6158.1|CP071176.1	CCTyper	CDS	410499	414512	1338	+	.	ID=SEQF6158.1|CP071176.1_402_cas;Genome_ID=SEQF6158.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1132.2;Coverage_Seq=0.9977578475336323;Coverage_Hmm=0.9982142857142857
SEQF6158.1|CP071176.1	CCTyper	CDS	415706	416365	220	+	.	ID=SEQF6158.1|CP071176.1_405_cas;Genome_ID=SEQF6158.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=4.1e-107;Score=354.0;Coverage_Seq=0.990909090909091;Coverage_Hmm=1.0