SEQF6198.1|LR025099.1	CCTyper	repeat_region	3171525	3172349	825	+	.	ID=SEQF6198.1|LR025099.1_1;Genome_ID=SEQF6198.1;Note=Predictor:CCtyper;Start:3171525;End:3172349;Consensus_Repeat:GGAAACACCCCCACGTGCGTGGGGAAGAC;Number_of_Repeats:14;Repeat_Length:29;Average_Spacer_Length:32.2;Repeat_Identity:90.4;Spacer_Identity:41.7;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.994;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171525	3171553	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT1;Parent=SEQF6198.1|LR025099.1_1;Note=GTGCTAAACCCCGCATGCATGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171554	3171588	35	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER1;Parent=SEQF6198.1|LR025099.1_1;Note=AGATCTACTATCGCCATGCGCAGTCAGCGCCGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171589	3171617	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT2;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACATGTGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171618	3171649	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER2;Parent=SEQF6198.1|LR025099.1_1;Note=TGCTCTCCTGCGAGATCGTGGCGTGCGAACTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171650	3171678	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT3;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171679	3171710	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER3;Parent=SEQF6198.1|LR025099.1_1;Note=CTCGGCCGGGCTGAATGCCCAGTTACCCCAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171711	3171739	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT4;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171740	3171771	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER4;Parent=SEQF6198.1|LR025099.1_1;Note=GCGGTATCGCAAGAAGGCCGCAGAGCTGGTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171772	3171800	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT5;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171801	3171832	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER5;Parent=SEQF6198.1|LR025099.1_1;Note=TACGTGGATACCGTGTTGCACCAATGAGTATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171833	3171861	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT6;Parent=SEQF6198.1|LR025099.1_1;Note=AGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171862	3171893	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER6;Parent=SEQF6198.1|LR025099.1_1;Note=GATAACGGCTATGACGCGCTGATTTATTCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171894	3171922	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT7;Parent=SEQF6198.1|LR025099.1_1;Note=AGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171923	3171954	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER7;Parent=SEQF6198.1|LR025099.1_1;Note=CTGCTCTACGGCGATGTTCCGCGGATCGAGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3171955	3171983	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT8;Parent=SEQF6198.1|LR025099.1_1;Note=AGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3171984	3172015	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER8;Parent=SEQF6198.1|LR025099.1_1;Note=AGCTCTTTCAGGCGTGACAGCGCTTCGGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3172016	3172044	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT9;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3172045	3172076	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER9;Parent=SEQF6198.1|LR025099.1_1;Note=TGCATTAATGACTGTCCTTCACCAAGAAAATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3172077	3172105	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT10;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3172106	3172137	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER10;Parent=SEQF6198.1|LR025099.1_1;Note=GTGACGCTTGTCCCGCCTTCGTTCCAGGTGGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3172138	3172166	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT11;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3172167	3172198	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER11;Parent=SEQF6198.1|LR025099.1_1;Note=GCAGGCTCACCAGTGTGGTGCCAGCATCTACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3172199	3172227	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT12;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3172228	3172259	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER12;Parent=SEQF6198.1|LR025099.1_1;Note=GCCGCGCCGCTCCGCCATCACTCGCTGGAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3172260	3172288	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT13;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3172289	3172320	32	+	.	ID=SEQF6198.1|LR025099.1_1_SPACER13;Parent=SEQF6198.1|LR025099.1_1;Note=CACAATCACAGTGAAAAACCCCTTTAATTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3172321	3172349	29	+	.	ID=SEQF6198.1|LR025099.1_1_REPEAT14;Parent=SEQF6198.1|LR025099.1_1;Note=GGAAACACCCCCACGTGCGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	repeat_region	3181102	3181737	636	+	.	ID=SEQF6198.1|LR025099.1_2;Genome_ID=SEQF6198.1;Note=Predictor:CCtyper;Start:3181102;End:3181737;Consensus_Repeat:GAAACACCCCCACGCATGTGGGGAAGAC;Number_of_Repeats:11;Repeat_Length:28;Average_Spacer_Length:32.8;Repeat_Identity:92.4;Spacer_Identity:44.0;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: I-E;Cas_Subtype_Prediction:I-E;Subtype_Probability:0.987;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181102	3181129	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT1;Parent=SEQF6198.1|LR025099.1_2;Note=AAAACACCTCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181130	3181160	31	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER1;Parent=SEQF6198.1|LR025099.1_2;Note=AGGATAGAGCCAAATCCGCTCACACGTGATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181161	3181188	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT2;Parent=SEQF6198.1|LR025099.1_2;Note=AAGAAACACCCACACATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181189	3181221	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER2;Parent=SEQF6198.1|LR025099.1_2;Note=CCGGCATCCGTCAGCTCGACGGCCAGCTGCAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181222	3181249	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT3;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCGTGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181250	3181282	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER3;Parent=SEQF6198.1|LR025099.1_2;Note=ACCCGCAGCGCTATCCCGCCGCAGATGATGGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181283	3181310	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT4;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181311	3181343	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER4;Parent=SEQF6198.1|LR025099.1_2;Note=GCATCAGCAGGGGCATAGAACGCCTGGAACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181344	3181371	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT5;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181372	3181404	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER5;Parent=SEQF6198.1|LR025099.1_2;Note=TTCAGCACCCCAACGATTAGCTTCTCCCATTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181405	3181432	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT6;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181433	3181465	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER6;Parent=SEQF6198.1|LR025099.1_2;Note=GCCAGAATCTGGCTTACCGGTATCTGGGTTTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181466	3181493	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT7;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181494	3181526	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER7;Parent=SEQF6198.1|LR025099.1_2;Note=ACGCCCACCTGGACAATGCTATTGATCACGCTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181527	3181554	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT8;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181555	3181587	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER8;Parent=SEQF6198.1|LR025099.1_2;Note=CCGGAACCCGCCGGGCCGGTAGAGCCATCGTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181588	3181615	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT9;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181616	3181648	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER9;Parent=SEQF6198.1|LR025099.1_2;Note=TAGTGCCTCAGTGCATCAACCAGCCGCGCTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181649	3181676	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT10;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	binding_site	3181677	3181709	33	+	.	ID=SEQF6198.1|LR025099.1_2_SPACER10;Parent=SEQF6198.1|LR025099.1_2;Note=CGACAATGACGAGTATTCCCGCTCTCCGGCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	direct_repeat	3181710	3181737	28	+	.	ID=SEQF6198.1|LR025099.1_2_REPEAT11;Parent=SEQF6198.1|LR025099.1_2;Note=GAAACACCCCCACGCATGTGGGGAAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6198.1|LR025099.1	CCTyper	OPERON	3172397	3180689	8293	-	.	ID=SEQF6198.1|LR025099.1@43;Genome_ID=SEQF6198.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type I-E;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=I-E;Best_score=28.0;Genes=Cas2_1_CAS-I-II-III-IV-V-VI,Cas1_0_IE,Cas5_0_IE,Cas7_0_CAS-I-E,Cas6_0_IE,Cse2gr11_1_CAS-I-E,Cas8e_1_CAS-I-E,Cas3_0_CAS-I;Positions=2929,2930,2931,2932,2933,2934,2935,2936;E-values=4.70e-29,1.30e-96,3.00e-56,3.60e-98,7.40e-44,1.60e-27,7.70e-79,1.90e-60;CoverageSeq=0.938,0.914,0.958,0.875,0.944,0.735,0.935,0.394;CoverageHMM=0.968,0.989,0.996,0.988,0.99,0.993,1.0,0.898;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6198.1|LR025099.1	CCTyper	CDS	3172662	3173537	292	-	.	ID=SEQF6198.1|LR025099.1_2930_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_IE;coding_strand=-;E-value=1.2999999999999999e-96;Score=321.1;Coverage_Seq=0.9143835616438356;Coverage_Hmm=0.9888475836431226
SEQF6198.1|LR025099.1	CCTyper	CDS	3172397	3172684	96	-	.	ID=SEQF6198.1|LR025099.1_2929_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas2_1_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=4.7e-29;Score=98.5;Coverage_Seq=0.9375;Coverage_Hmm=0.967741935483871
SEQF6198.1|LR025099.1	CCTyper	CDS	3178074	3180689	872	-	.	ID=SEQF6198.1|LR025099.1_2936_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas3_0_CAS-I;coding_strand=-;E-value=1.9e-60;Score=203.0;Coverage_Seq=0.3944954128440367;Coverage_Hmm=0.8980169971671388
SEQF6198.1|LR025099.1	CCTyper	CDS	3173537	3174253	239	-	.	ID=SEQF6198.1|LR025099.1_2931_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas5_0_IE;coding_strand=-;E-value=3e-56;Score=188.8;Coverage_Seq=0.9581589958158996;Coverage_Hmm=0.9956521739130435
SEQF6198.1|LR025099.1	CCTyper	CDS	3175329	3175976	216	-	.	ID=SEQF6198.1|LR025099.1_2933_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_IE;coding_strand=-;E-value=7.400000000000001e-44;Score=148.7;Coverage_Seq=0.9444444444444444;Coverage_Hmm=0.9903846153846154
SEQF6198.1|LR025099.1	CCTyper	CDS	3174266	3175300	345	-	.	ID=SEQF6198.1|LR025099.1_2932_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas7_0_CAS-I-E;coding_strand=-;E-value=3.6e-98;Score=327.6;Coverage_Seq=0.8753623188405797;Coverage_Hmm=0.9876923076923076
SEQF6198.1|LR025099.1	CCTyper	CDS	3176547	3178070	508	-	.	ID=SEQF6198.1|LR025099.1_2935_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cas8e_1_CAS-I-E;coding_strand=-;E-value=7.7e-79;Score=264.1;Coverage_Seq=0.9350393700787402;Coverage_Hmm=1.0
SEQF6198.1|LR025099.1	CCTyper	CDS	3175969	3176535	189	-	.	ID=SEQF6198.1|LR025099.1_2934_cas;Genome_ID=SEQF6198.1;Feature_type=CDS;Product=Cas Prediction : Cse2gr11_1_CAS-I-E;coding_strand=-;E-value=1.6000000000000001e-27;Score=94.7;Coverage_Seq=0.7354497354497355;Coverage_Hmm=0.993006993006993