SEQF6458.1|JAHKGX010000001.1	CCTyper	repeat_region	738110	738804	695	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1;Genome_ID=SEQF6458.1;Note=Predictor:CCtyper;Start:738110;End:738804;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:11;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:40.5;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738110	738145	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT1;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738146	738174	29	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER1;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=TTGTCTTGAATGCCCTTGATATATTCAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738175	738210	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT2;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738211	738240	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER2;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=AGGTAGTCCGGTGAGTGGATAAATTAACCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738241	738276	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT3;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738277	738306	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER3;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=TTCTCCTGTCTCTGGGTTTACGTCTTCATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738307	738342	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT4;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738343	738372	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER4;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=ATTTGGCTGGGTCTATAAGTATTTTACTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738373	738408	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT5;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738409	738438	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER5;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=CCGCAAGGATTGAACCTTACGAGATTAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738439	738474	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT6;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738475	738504	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER6;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GGATTTCCGTGCCAGGCTTTCTCGATTGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738505	738540	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT7;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738541	738570	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER7;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=ACAAGACCTAATCGATTGGGACATGGATCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738571	738606	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT8;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738607	738636	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER8;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=ACTATCAAGCTGCCCACCAACTGCGTCACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738637	738672	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT9;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738673	738702	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER9;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=ATCAAAAATATTCATTATAACCCTCACATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738703	738738	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT10;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	binding_site	738739	738768	30	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_SPACER10;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=AGCTACAAGCGATATGAAGCGCTGTTGCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	direct_repeat	738769	738804	36	+	.	ID=SEQF6458.1|JAHKGX010000001.1_1_REPEAT11;Parent=SEQF6458.1|JAHKGX010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6458.1|JAHKGX010000001.1	CCTyper	OPERON	730457	740312	9856	+	.	ID=SEQF6458.1|JAHKGX010000001.1@23;Genome_ID=SEQF6458.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csm2_0_IIIA,Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A,Cas8c_0_CAS-I-C;Positions=665,669,670,671,672,675;E-values=2.00e-04,5.80e-221,5.50e-97,1.10e-31,4.60e-141,9.30e-03;CoverageSeq=0.562,0.697,0.911,0.954,0.994,0.601;CoverageHMM=0.479,0.984,0.996,0.888,1.0,0.648;Strand_Interference=1;Strand_Adaptation=1
SEQF6458.1|JAHKGX010000001.1	CCTyper	CDS	735763	736671	303	+	.	ID=SEQF6458.1|JAHKGX010000001.1_670_cas;Genome_ID=SEQF6458.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.500000000000001e-97;Score=320.9;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF6458.1|JAHKGX010000001.1	CCTyper	CDS	736676	736999	108	+	.	ID=SEQF6458.1|JAHKGX010000001.1_671_cas;Genome_ID=SEQF6458.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.1e-31;Score=106.2;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF6458.1|JAHKGX010000001.1	CCTyper	CDS	739839	740312	158	+	.	ID=SEQF6458.1|JAHKGX010000001.1_675_cas;Genome_ID=SEQF6458.1;Feature_type=CDS;Product=Cas Prediction : Cas8c_0_CAS-I-C;coding_strand=+;E-value=0.0093;Score=11.3;Coverage_Seq=0.6012658227848101;Coverage_Hmm=0.6475694444444444
SEQF6458.1|JAHKGX010000001.1	CCTyper	CDS	732217	735585	1123	+	.	ID=SEQF6458.1|JAHKGX010000001.1_669_cas;Genome_ID=SEQF6458.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=5.8e-221;Score=732.8;Coverage_Seq=0.697239536954586;Coverage_Hmm=0.9843373493975903
SEQF6458.1|JAHKGX010000001.1	CCTyper	CDS	730457	730723	89	+	.	ID=SEQF6458.1|JAHKGX010000001.1_665_cas;Genome_ID=SEQF6458.1;Feature_type=CDS;Product=Cas Prediction : Csm2_0_IIIA;coding_strand=+;E-value=0.0002;Score=18.9;Coverage_Seq=0.5617977528089888;Coverage_Hmm=0.4791666666666667
SEQF6458.1|JAHKGX010000001.1	CCTyper	CDS	736996	738039	348	+	.	ID=SEQF6458.1|JAHKGX010000001.1_672_cas;Genome_ID=SEQF6458.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=4.6e-141;Score=466.4;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0
