SEQF6467.1|JPGA01000003.1	CCTyper	repeat_region	101950	102909	960	+	.	ID=SEQF6467.1|JPGA01000003.1_1;Genome_ID=SEQF6467.1;Note=Predictor:CCtyper;Start:101950;End:102909;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:98.9;Spacer_Identity:40.0;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	101950	101985	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT1;Parent=SEQF6467.1|JPGA01000003.1_1;Note=TTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	101986	102015	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER1;Parent=SEQF6467.1|JPGA01000003.1_1;Note=CGAGGTGTGGGTTGGTTTGAACGTCCATTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102016	102051	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT2;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102052	102081	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER2;Parent=SEQF6467.1|JPGA01000003.1_1;Note=ATACCCATTTTAGCAAAAAAGTGAGGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102082	102117	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT3;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102118	102147	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER3;Parent=SEQF6467.1|JPGA01000003.1_1;Note=TGTGTTTTGTGTTGACATACGTCAACAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102148	102183	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT4;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102184	102213	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER4;Parent=SEQF6467.1|JPGA01000003.1_1;Note=CGCCCGACTGATTCCGATTTGATGACCGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102214	102249	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT5;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102250	102279	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER5;Parent=SEQF6467.1|JPGA01000003.1_1;Note=CGCCTTTTTCGAGTTGAAGAAATAACTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102280	102315	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT6;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102316	102345	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER6;Parent=SEQF6467.1|JPGA01000003.1_1;Note=TTTGCTCTCTCTTTGTCCTCCTCCTCGTCC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102346	102381	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT7;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102382	102411	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER7;Parent=SEQF6467.1|JPGA01000003.1_1;Note=TCCTATCACCTGTCACTTGCTTGACTTGAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102412	102447	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT8;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102448	102477	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER8;Parent=SEQF6467.1|JPGA01000003.1_1;Note=ACCATCGATTGCTAATTGTAAATCATCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102478	102513	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT9;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102514	102543	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER9;Parent=SEQF6467.1|JPGA01000003.1_1;Note=CAAAGTCCTCACCAGAATCAAAGATCATCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102544	102579	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT10;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102580	102609	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER10;Parent=SEQF6467.1|JPGA01000003.1_1;Note=AGCGTGAAGCCTTGAAGAAGATTGATTCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102610	102645	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT11;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102646	102675	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER11;Parent=SEQF6467.1|JPGA01000003.1_1;Note=ATAACAAAGTGGCAATGCAAGCCTTTTAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102676	102711	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT12;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102712	102741	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER12;Parent=SEQF6467.1|JPGA01000003.1_1;Note=TGGATTATTCTTTATAAATTCATAAACCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102742	102777	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT13;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102778	102807	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER13;Parent=SEQF6467.1|JPGA01000003.1_1;Note=AGAAAGTAAACTAATCGGACGTAAACACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102808	102843	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT14;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	binding_site	102844	102873	30	+	.	ID=SEQF6467.1|JPGA01000003.1_1_SPACER14;Parent=SEQF6467.1|JPGA01000003.1_1;Note=TATAGAAATGAGCAACTATTTGAATGTCGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	direct_repeat	102874	102909	36	+	.	ID=SEQF6467.1|JPGA01000003.1_1_REPEAT15;Parent=SEQF6467.1|JPGA01000003.1_1;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	repeat_region	894131	894363	233	+	.	ID=SEQF6467.1|JPGA01000006.1_2;Genome_ID=SEQF6467.1;Note=Predictor:CCtyper;Start:894131;End:894363;Consensus_Repeat:GGTTTTTGTAGTCTCCAAAATTATGACCGATAAAACCA;Number_of_Repeats:4;Repeat_Length:38;Average_Spacer_Length:27;Repeat_Identity:90.1;Spacer_Identity:39.8;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: II-A;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.794;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	direct_repeat	894131	894168	38	+	.	ID=SEQF6467.1|JPGA01000006.1_2_REPEAT1;Parent=SEQF6467.1|JPGA01000006.1_2;Note=GGTTTTTGTAGTCTCCAAAATTATGACCGATAAAACCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	binding_site	894169	894195	27	+	.	ID=SEQF6467.1|JPGA01000006.1_2_SPACER1;Parent=SEQF6467.1|JPGA01000006.1_2;Note=GTCGGTGTGTCGAAGTTGTCAAGAGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	direct_repeat	894196	894233	38	+	.	ID=SEQF6467.1|JPGA01000006.1_2_REPEAT2;Parent=SEQF6467.1|JPGA01000006.1_2;Note=GGTTTTTGTAGTCTCCAAAATTATGACCGATAAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	binding_site	894234	894260	27	+	.	ID=SEQF6467.1|JPGA01000006.1_2_SPACER2;Parent=SEQF6467.1|JPGA01000006.1_2;Note=TTCTTGATTTCAGCTAAGTCTATCATC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	direct_repeat	894261	894298	38	+	.	ID=SEQF6467.1|JPGA01000006.1_2_REPEAT3;Parent=SEQF6467.1|JPGA01000006.1_2;Note=AGTTTTTGTAGTCTCCAAAATTATGACCGATAAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	binding_site	894299	894325	27	+	.	ID=SEQF6467.1|JPGA01000006.1_2_SPACER3;Parent=SEQF6467.1|JPGA01000006.1_2;Note=GGTTAAATTTCTCTTTCTCGGCACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000006.1	CCTyper	direct_repeat	894326	894363	38	+	.	ID=SEQF6467.1|JPGA01000006.1_2_REPEAT4;Parent=SEQF6467.1|JPGA01000006.1_2;Note=GGTTTTTGTAGTCTCCAAAACTGTGACCGATAAAACCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6467.1|JPGA01000003.1	CCTyper	OPERON	103000	108986	5987	-	.	ID=SEQF6467.1|JPGA01000003.1@3;Genome_ID=SEQF6467.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=105,106,107,108;E-values=1.90e-100,1.10e-49,7.00e-103,0.00e+00;CoverageSeq=0.982,0.939,0.931,0.994;CoverageHMM=0.995,0.957,0.996,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6467.1|JPGA01000003.1	CCTyper	CDS	103993	104859	289	-	.	ID=SEQF6467.1|JPGA01000003.1_107_cas;Genome_ID=SEQF6467.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7e-103;Score=340.3;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6467.1|JPGA01000003.1	CCTyper	CDS	103652	103996	115	-	.	ID=SEQF6467.1|JPGA01000003.1_106_cas;Genome_ID=SEQF6467.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.1e-49;Score=164.2;Coverage_Seq=0.9391304347826087;Coverage_Hmm=0.9568965517241379
SEQF6467.1|JPGA01000003.1	CCTyper	CDS	104859	108986	1376	-	.	ID=SEQF6467.1|JPGA01000003.1_108_cas;Genome_ID=SEQF6467.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1055.8;Coverage_Seq=0.9941860465116279;Coverage_Hmm=0.9982142857142857
SEQF6467.1|JPGA01000003.1	CCTyper	CDS	103000	103662	221	-	.	ID=SEQF6467.1|JPGA01000003.1_105_cas;Genome_ID=SEQF6467.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1.9e-100;Score=331.7;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973