SEQF6493.1|RJPH01000001.1	CCTyper	repeat_region	316952	317508	557	+	.	ID=SEQF6493.1|RJPH01000001.1_1;Genome_ID=SEQF6493.1;Note=Predictor:CCtyper;Start:316952;End:317508;Consensus_Repeat:GTTATACCTTACCTATAAGGAATTGAGAC;Number_of_Repeats:8;Repeat_Length:29;Average_Spacer_Length:46.4;Repeat_Identity:93.1;Spacer_Identity:44.1;Spacer_Length_Sem:1.1;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.991;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	316952	316980	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT1;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	316981	317029	49	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER1;Parent=SEQF6493.1|RJPH01000001.1_1;Note=TTATTTCATCATGAAATTCGATACAATTCGGATTGATAGTGCTTAGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317030	317058	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT2;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317059	317102	44	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER2;Parent=SEQF6493.1|RJPH01000001.1_1;Note=ATATTGCAAGCTGCACACTTTTTAGTTACGAAAAGTACTGGCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317103	317131	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT3;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317132	317174	43	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER3;Parent=SEQF6493.1|RJPH01000001.1_1;Note=ATAACGATAGGGTCATCAAATTTGCAATCCATGAATATATATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317175	317203	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT4;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTATACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317204	317249	46	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER4;Parent=SEQF6493.1|RJPH01000001.1_1;Note=TTTTCCTTAACGTAAGCCTTATGGTATTCAACTTCCAGCTGTTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317250	317278	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT5;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTCTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317279	317325	47	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER5;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GCGTTGAATGCTGCTGCAAAGGCTTGTGCATTCTTGTTACGTTGAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317326	317354	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT6;Parent=SEQF6493.1|RJPH01000001.1_1;Note=ATTCTACCTTACCTAAAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317355	317399	45	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER6;Parent=SEQF6493.1|RJPH01000001.1_1;Note=TTGCCACTTTGAGTGATGTTAGCGCCAGTAGTGATTTTCGCTCCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317400	317428	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT7;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTCTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317429	317479	51	+	.	ID=SEQF6493.1|RJPH01000001.1_1_SPACER7;Parent=SEQF6493.1|RJPH01000001.1_1;Note=ATGCGACCCTCTGACTGGTCCATCACACGATAGGAATAATTCAGGGAAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317480	317508	29	+	.	ID=SEQF6493.1|RJPH01000001.1_1_REPEAT8;Parent=SEQF6493.1|RJPH01000001.1_1;Note=GTTCTACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	repeat_region	317609	318520	912	+	.	ID=SEQF6493.1|RJPH01000001.1_2;Genome_ID=SEQF6493.1;Note=Predictor:CCtyper;Start:317609;End:318520;Consensus_Repeat:TACCTTACCTATAAGGAATTGAGAC;Number_of_Repeats:13;Repeat_Length:25;Average_Spacer_Length:48.9;Repeat_Identity:91.8;Spacer_Identity:45.8;Spacer_Length_Sem:1.1;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.944;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317609	317633	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT1;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317634	317678	45	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER1;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TGTTCTGAATTTCTGCTTAATCGTTTCATGACCTACGTTTCGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317679	317703	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT2;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317704	317756	53	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER2;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TTCAGAACCCACATATAGAACTCACCTTTTGGTGACAATCCTGCTTCTTGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317757	317781	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT3;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317782	317835	54	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER3;Parent=SEQF6493.1|RJPH01000001.1_2;Note=GTACGTTCTTTTTCAGAAAGAACATGGTACATATTAAAGAGCGCTTTAACGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317836	317860	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT4;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTAAAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317861	317910	50	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER4;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TATTTACAGTCCGCTGAATTACCAATTATTCTACCGGCCCTATTTTGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317911	317935	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT5;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTATCCATAAGGAATTGAGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	317936	317985	50	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER5;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TAGCAACAGCCCCAAGAACAACAGTAGAGATCAAAGCGATACCAAAGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	317986	318010	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT6;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318011	318063	53	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER6;Parent=SEQF6493.1|RJPH01000001.1_2;Note=GCCTTGTTTCTTTTTCTATTGCACTAAGTTCTTTTATGTTTTTTAGTACGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318064	318088	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT7;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318089	318137	49	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER7;Parent=SEQF6493.1|RJPH01000001.1_2;Note=CTATTAGAATATCATGGATTCTTGCTAAAATCGATGGCTCTTCTGGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318138	318162	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT8;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318163	318212	50	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER8;Parent=SEQF6493.1|RJPH01000001.1_2;Note=ATTTAAGTCTTTTTAATAAAACCTTTTGCTGCTGAAATGAACAAACGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318213	318237	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT9;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318238	318278	41	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER9;Parent=SEQF6493.1|RJPH01000001.1_2;Note=GTTATGGTCTGTAGAATATTACTTTATCCTTCTTTTTGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318279	318303	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT10;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318304	318350	47	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER10;Parent=SEQF6493.1|RJPH01000001.1_2;Note=ATAACGATAGGGTCATCAAATTTGCAATCCATGAATATATATAGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318351	318375	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT11;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318376	318425	50	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER11;Parent=SEQF6493.1|RJPH01000001.1_2;Note=GTTGTTCTAGAGACAGATGAATCATTATCATGAACTAAATTTTTGCGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318426	318450	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT12;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	318451	318495	45	+	.	ID=SEQF6493.1|RJPH01000001.1_2_SPACER12;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TTTTTCGAGTTCACCACACTCGAACACACAGCACACTTTTGGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	318496	318520	25	+	.	ID=SEQF6493.1|RJPH01000001.1_2_REPEAT13;Parent=SEQF6493.1|RJPH01000001.1_2;Note=TACCTTACCTATAAGGAATTGTTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	repeat_region	320281	320975	695	+	.	ID=SEQF6493.1|RJPH01000001.1_3;Genome_ID=SEQF6493.1;Note=Predictor:CCtyper;Start:320281;End:320975;Consensus_Repeat:TACCTTACCTATAAGGAATTGAG;Number_of_Repeats:10;Repeat_Length:23;Average_Spacer_Length:51.7;Repeat_Identity:93.5;Spacer_Identity:46.9;Spacer_Length_Sem:1.5;Trusted:True;Cas_Type_Prediction: III-B;Cas_Subtype_Prediction:III-B;Subtype_Probability:0.866;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320281	320303	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT1;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320304	320353	50	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER1;Parent=SEQF6493.1|RJPH01000001.1_3;Note=CCTGTTTCCGCTTTTACTGTTCTAGCCATTTGTGTTTACCTCATTTGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320354	320376	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT2;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320377	320425	49	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER2;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACCTTCGAGCTTTTTATATTTCGATCTCTCGAAATATTCATTAGCGCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320426	320448	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT3;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320449	320497	49	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER3;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACGAAGCCTACTACTTTTTTTAGGCTTCTCCTTTGGTGCATTCTTGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320498	320520	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT4;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACTTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320521	320580	60	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER4;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACTCACTACGATAAGTAAGACCATGTTCATCAATATCCAACATTACCCATCTTTTCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320581	320603	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT5;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320604	320657	54	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER5;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACTTTTTACATTGACCGAATGTTACGTCTTTACTATCTTCCACTGAACGAGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320658	320680	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT6;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TCCCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320681	320730	50	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER6;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACTTTTGAGCTCTTTGATGAATGTTTCTAAAACCCAGTCTTCGAGTGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320731	320753	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT7;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320754	320807	54	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER7;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACTCAATCGACTTTTCAAAAGGAGTGGCGTTCATCAACACTACATGGTTCGTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320808	320830	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT8;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320831	320885	55	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER8;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACGCTTCTTAAGGAATTTTTTGAATAATCTTGCGAGATGTTTTTCTTCAGCGTTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320886	320908	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT9;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTACCTATAAGGAATTGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	binding_site	320909	320952	44	+	.	ID=SEQF6493.1|RJPH01000001.1_3_SPACER9;Parent=SEQF6493.1|RJPH01000001.1_3;Note=ACTTTCCTCCTTAAAGTACCTCAGTTGCCCAAGGTCTGATGTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	direct_repeat	320953	320975	23	+	.	ID=SEQF6493.1|RJPH01000001.1_3_REPEAT10;Parent=SEQF6493.1|RJPH01000001.1_3;Note=TACCTTGCCTATAAGGAATTGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	repeat_region	79715	81743	2029	+	.	ID=SEQF6493.1|RJPH01000002.1_4;Genome_ID=SEQF6493.1;Note=Predictor:CCtyper;Start:79715;End:81743;Consensus_Repeat:GTTTCCGGCCCCTCTCGAGGTAGATAGG;Number_of_Repeats:28;Repeat_Length:28;Average_Spacer_Length:46.1;Repeat_Identity:84.9;Spacer_Identity:47.6;Spacer_Length_Sem:0.5;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.967;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	79715	79742	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT1;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GAAACTGTCCCCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	79743	79791	49	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER1;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GATCTATACTTCTAAACGCTTTGAAACTAACAACCCAATGGGGATTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	79792	79819	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT2;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	79820	79864	45	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER2;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACAGAAAATCCAACCTTTACAACCGAACCAGACGGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	79865	79892	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT3;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTTTCGAGGTGGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	79893	79939	47	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER3;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GAGCTATACAATTTCCCTTGGTCTAATGGATATGACAGTGGATTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	79940	79967	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT4;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	79968	80014	47	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER4;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGATATACCAGAAAGCGTGGTTATTGTATGAATAAACAAGATACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80015	80042	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT5;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80043	80083	41	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER5;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGCTATACTATGGCCATTATTACATGGGTTCAAACCCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80084	80111	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT6;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTTGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80112	80161	50	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER6;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GGGCTATACTTTCGAAGAGGTCACAGAATGAAACGATTCGTAGCAATCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80162	80189	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT7;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCTCTCCCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80190	80239	50	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER7;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GGTCTATACATTGGTATAATGGCCAAACTTGTATTTGACGAAACAGGAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80240	80267	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT8;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTTGAGGTGGATAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80268	80313	46	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER8;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACTTCTCAGTCAGTCTAACAGTACAGTAGTACGTCTACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80314	80341	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT9;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80342	80385	44	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER9;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGCTATACCGCAAGAAGTCTTAAAAATAACTCGTCTATCAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80386	80413	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT10;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCGCGAGGTAGGTAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80414	80464	51	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER10;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGCTATACAGAATTCACAATAGAGCCAGATGGTTTGATTACAACTAAATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80465	80492	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT11;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTCCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80493	80540	48	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER11;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACAGAAAAAATACAAAATTACACTTCTAAACCGAAACGACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80541	80568	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT12;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80569	80613	45	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER12;Parent=SEQF6493.1|RJPH01000002.1_4;Note=ATCTATACCTGTAACTGTTCCTGCTAAACATGATACTCTTTATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80614	80641	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT13;Parent=SEQF6493.1|RJPH01000002.1_4;Note=ATTTTCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80642	80686	45	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER13;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TGGATATACTGCTTACTGGATGACGTGGGAACCAAGCACCAACAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80687	80714	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT14;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCTCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80715	80756	42	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER14;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GGGCTATACGGTTGGATATGATTTAGCCTTTGGAGAAGTCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80757	80784	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT15;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80785	80833	49	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER15;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGCTATACATGATACTGGATGGTGGTATGAATACCCTGACGGCTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80834	80861	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT16;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80862	80906	45	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER16;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACGTCGTATGAATCATATACAACAACTGAATTACCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80907	80934	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT17;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGTCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	80935	80983	49	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER17;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACAACTTTGTCGAAGGGTTATAAGTATATGAACTCTCCTGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	80984	81011	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT18;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81012	81053	42	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER18;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GGGATATACAATCTAGACACATCAGTATTGCACATACAATCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81054	81081	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT19;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTATCCGGCTCCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81082	81128	47	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER19;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TACCTATACTTTGAAAAATACCTGAACGAAGGTATCGACGTAGAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81129	81156	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT20;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTTGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81157	81200	44	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER20;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GAGATATACAAATCGACCTAGAGCAACAGATAAATCAATGATAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81201	81228	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT21;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCTCTCTCGAGGTTGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81229	81271	43	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER21;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACGTTCTAAAGGCGAATTTTACCTTTGGGTAGCTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81272	81299	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT22;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81300	81346	47	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER22;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TTCTTATACCTGATTGACCGTTTCAATAATGAATTTTTCAACCAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81347	81374	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT23;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81375	81417	43	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER23;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGCTATACAAAAAGTGACTTGCTAATACACTGGAGACTTTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81418	81445	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT24;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCGCGAGGTTGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81446	81489	44	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER24;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TAGCTATACTAAATGAAAACTTTTAAGTTTGAAGCTTACGGACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81490	81517	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT25;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGACCCCTCGCGGAGGTATATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81518	81566	49	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER25;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GGAGCTATACAGATCGTTCGATTGGTGGTGCGTACAAGTACGCTTATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81567	81594	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT26;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTACCGAGGTAAATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81595	81642	48	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER26;Parent=SEQF6493.1|RJPH01000002.1_4;Note=ATTCTATACTGGTCGTGGTGGAACAAGTTTCCAACCGGTATTCAATTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81643	81670	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT27;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGACCCCTATCAAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	binding_site	81671	81715	45	+	.	ID=SEQF6493.1|RJPH01000002.1_4_SPACER27;Parent=SEQF6493.1|RJPH01000002.1_4;Note=TATCTATACTTGCTCACGTCCTTGCTCAAGATTCATGGAACTCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000002.1	CCTyper	direct_repeat	81716	81743	28	+	.	ID=SEQF6493.1|RJPH01000002.1_4_REPEAT28;Parent=SEQF6493.1|RJPH01000002.1_4;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	repeat_region	55337	55550	214	+	.	ID=SEQF6493.1|RJPH01000010.1_5;Genome_ID=SEQF6493.1;Note=Predictor:CCtyper;Start:55337;End:55550;Consensus_Repeat:TGACAATTCCTGAATACACTGATCCTATCGGAAC;Number_of_Repeats:4;Repeat_Length:34;Average_Spacer_Length:26.0;Repeat_Identity:81.5;Spacer_Identity:60.3;Spacer_Length_Sem:0.0;Trusted:False;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:I-A;Subtype_Probability:0.139;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	direct_repeat	55337	55370	34	+	.	ID=SEQF6493.1|RJPH01000010.1_5_REPEAT1;Parent=SEQF6493.1|RJPH01000010.1_5;Note=TTGAAATTCCGGAATATACTGAGCCTATCGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	binding_site	55371	55396	26	+	.	ID=SEQF6493.1|RJPH01000010.1_5_SPACER1;Parent=SEQF6493.1|RJPH01000010.1_5;Note=CGCAGGGCAAGAGGAACCGCCTACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	direct_repeat	55397	55430	34	+	.	ID=SEQF6493.1|RJPH01000010.1_5_REPEAT2;Parent=SEQF6493.1|RJPH01000010.1_5;Note=TGACAATTCCTGAATACACTGATCCTATCGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	binding_site	55431	55456	26	+	.	ID=SEQF6493.1|RJPH01000010.1_5_SPACER2;Parent=SEQF6493.1|RJPH01000010.1_5;Note=TGCGGGAGAACAAGAAGCTCCAACTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	direct_repeat	55457	55490	34	+	.	ID=SEQF6493.1|RJPH01000010.1_5_REPEAT3;Parent=SEQF6493.1|RJPH01000010.1_5;Note=TTGAAATTCCGGAATACACCGAGCCTATCGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	binding_site	55491	55516	26	+	.	ID=SEQF6493.1|RJPH01000010.1_5_SPACER3;Parent=SEQF6493.1|RJPH01000010.1_5;Note=CGCAGGGCAAGAAGAGCCACCTACAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000010.1	CCTyper	direct_repeat	55517	55550	34	+	.	ID=SEQF6493.1|RJPH01000010.1_5_REPEAT4;Parent=SEQF6493.1|RJPH01000010.1_5;Note=TTGAAAAGCCGGAATACACTGAGCCTATCGGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6493.1|RJPH01000001.1	CCTyper	OPERON	309712	320105	10394	+	.	ID=SEQF6493.1|RJPH01000001.1@15;Genome_ID=SEQF6493.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-B;Complete_Interference=83%;Complete_Adaptation=NA;Best_type=III-B;Best_score=14.0;Genes=Cas6_7_CAS-I-II-III-IV-V-VI,Cmr1gr7_5_CAS-III-B-III-C,Cmr3gr5_1_CAS-III-B-III-C,Cmr4gr7_0_CAS-III-B-III-C,Cmr5gr11_1_CAS-III-B,Cmr6gr7_1_CAS-III-B-III-C,CorA_0_CAS-III-B-III-D;Positions=299,300,302,303,304,305,307;E-values=2.00e-47,6.70e-80,9.30e-25,4.60e-39,5.20e-33,1.80e-36,9.80e-57;CoverageSeq=0.992,0.792,0.491,0.72,0.952,0.756,0.91;CoverageHMM=0.983,0.997,0.639,0.649,0.985,0.899,0.849;Strand_Interference=1;Strand_Adaptation=NA
SEQF6493.1|RJPH01000002.1	CCTyper	OPERON	72365	79632	7268	-	.	ID=SEQF6493.1|RJPH01000002.1@3;Genome_ID=SEQF6493.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=16.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI;Positions=73,74,75,76,77,78,79;E-values=1.30e-77,1.20e-32,2.80e-39,8.80e-73,1.90e-23,2.50e-163,1.00e-27;CoverageSeq=0.856,0.711,0.987,0.919,0.921,0.87,0.791;CoverageHMM=0.981,0.701,0.984,0.981,0.982,1.0,0.912;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	76677	78920	748	-	.	ID=SEQF6493.1|RJPH01000002.1_78_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=2.5e-163;Score=541.8;Coverage_Seq=0.8703208556149733;Coverage_Hmm=1.0
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	78901	79632	244	-	.	ID=SEQF6493.1|RJPH01000002.1_79_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1e-27;Score=94.6;Coverage_Seq=0.7909836065573771;Coverage_Hmm=0.9123711340206185
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	309712	310440	243	+	.	ID=SEQF6493.1|RJPH01000001.1_299_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cas6_7_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=2e-47;Score=159.0;Coverage_Seq=0.9917695473251029;Coverage_Hmm=0.983402489626556
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	310450	311721	424	+	.	ID=SEQF6493.1|RJPH01000001.1_300_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cmr1gr7_5_CAS-III-B-III-C;coding_strand=+;E-value=6.700000000000001e-80;Score=265.9;Coverage_Seq=0.7924528301886793;Coverage_Hmm=0.9970588235294118
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	313375	314658	428	+	.	ID=SEQF6493.1|RJPH01000001.1_302_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cmr3gr5_1_CAS-III-B-III-C;coding_strand=+;E-value=9.3e-25;Score=84.8;Coverage_Seq=0.49065420560747663;Coverage_Hmm=0.6388888888888888
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	314662	315378	239	+	.	ID=SEQF6493.1|RJPH01000001.1_303_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cmr4gr7_0_CAS-III-B-III-C;coding_strand=+;E-value=4.6e-39;Score=131.5;Coverage_Seq=0.7196652719665272;Coverage_Hmm=0.648936170212766
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	315359	315793	145	+	.	ID=SEQF6493.1|RJPH01000001.1_304_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cmr5gr11_1_CAS-III-B;coding_strand=+;E-value=5.2000000000000006e-33;Score=110.6;Coverage_Seq=0.9517241379310345;Coverage_Hmm=0.9854014598540146
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	315799	316608	270	+	.	ID=SEQF6493.1|RJPH01000001.1_305_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Cmr6gr7_1_CAS-III-B-III-C;coding_strand=+;E-value=1.8e-36;Score=122.7;Coverage_Seq=0.7555555555555555;Coverage_Hmm=0.8990825688073395
SEQF6493.1|RJPH01000001.1	CCTyper	CDS	318609	320105	499	+	.	ID=SEQF6493.1|RJPH01000001.1_307_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : CorA_0_CAS-III-B-III-D;coding_strand=+;E-value=9.800000000000001e-57;Score=189.7;Coverage_Seq=0.9098196392785571;Coverage_Hmm=0.8493647912885662
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	76296	76676	127	-	.	ID=SEQF6493.1|RJPH01000002.1_77_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=1.9e-23;Score=80.4;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	75634	76296	221	-	.	ID=SEQF6493.1|RJPH01000002.1_76_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=8.8e-73;Score=241.4;Coverage_Seq=0.918552036199095;Coverage_Hmm=0.9813953488372092
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	74727	75632	302	-	.	ID=SEQF6493.1|RJPH01000002.1_75_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.7999999999999998e-39;Score=132.0;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	73651	74730	360	-	.	ID=SEQF6493.1|RJPH01000002.1_74_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.2e-32;Score=110.4;Coverage_Seq=0.7111111111111111;Coverage_Hmm=0.7013698630136986
SEQF6493.1|RJPH01000002.1	CCTyper	CDS	72365	73654	430	-	.	ID=SEQF6493.1|RJPH01000002.1_73_cas;Genome_ID=SEQF6493.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=1.3e-77;Score=257.9;Coverage_Seq=0.8558139534883721;Coverage_Hmm=0.9805555555555555