SEQF6495.1|RJNE01000003.1	CCTyper	repeat_region	163029	163186	158	+	.	ID=SEQF6495.1|RJNE01000003.1_1;Genome_ID=SEQF6495.1;Note=Predictor:CCtyper;Start:163029;End:163186;Consensus_Repeat:GTTTTATCGGTCACAATTTTGGAGACTA;Number_of_Repeats:3;Repeat_Length:28;Average_Spacer_Length:37.0;Repeat_Identity:100.0;Spacer_Identity:45.1;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.365;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000003.1	CCTyper	direct_repeat	163029	163056	28	+	.	ID=SEQF6495.1|RJNE01000003.1_1_REPEAT1;Parent=SEQF6495.1|RJNE01000003.1_1;Note=GTTTTATCGGTCACAATTTTGGAGACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000003.1	CCTyper	binding_site	163057	163093	37	+	.	ID=SEQF6495.1|RJNE01000003.1_1_SPACER1;Parent=SEQF6495.1|RJNE01000003.1_1;Note=TAAAAACAATCATTCTCAGTACCTCGAAGCGCATTGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000003.1	CCTyper	direct_repeat	163094	163121	28	+	.	ID=SEQF6495.1|RJNE01000003.1_1_REPEAT2;Parent=SEQF6495.1|RJNE01000003.1_1;Note=GTTTTATCGGTCACAATTTTGGAGACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000003.1	CCTyper	binding_site	163122	163158	37	+	.	ID=SEQF6495.1|RJNE01000003.1_1_SPACER2;Parent=SEQF6495.1|RJNE01000003.1_1;Note=CAAAAACCTAAAGAAAAAGTAACAGGAGCTGAGATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000003.1	CCTyper	direct_repeat	163159	163186	28	+	.	ID=SEQF6495.1|RJNE01000003.1_1_REPEAT3;Parent=SEQF6495.1|RJNE01000003.1_1;Note=GTTTTATCGGTCACAATTTTGGAGACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	repeat_region	107600	108837	1238	+	.	ID=SEQF6495.1|RJNE01000005.1_2;Genome_ID=SEQF6495.1;Note=Predictor:CCtyper;Start:107600;End:108837;Consensus_Repeat:GTTTCCGGCCCCTCGCGAGGTAGATAGGTA;Number_of_Repeats:17;Repeat_Length:30;Average_Spacer_Length:45.5;Repeat_Identity:77.6;Spacer_Identity:48.0;Spacer_Length_Sem:0.6;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.962;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	107600	107629	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT1;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GAAACTGTCCCCTCTCGAGGTAGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	107630	107675	46	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER1;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACTCTACGGTAGCTTCCAACCGTAAAGACAGGTATGGTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	107676	107705	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT2;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	107706	107748	43	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER2;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACACAATTTAACAATACAGCAATCGTGGCAGGTAACTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	107749	107778	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT3;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	107779	107823	45	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER3;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACAGGGCTATGACCTCACAAGAATATTTAGAAATTCTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	107824	107853	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT4;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCTCTCTTGAGGTAGATAGGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	107854	107897	44	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER4;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACACACTGTTACGAACTACACACCGGAATCACCAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	107898	107927	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT5;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGACCCCTCGCGAGGTTGATAGTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	107928	107973	46	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER5;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACTAACGAGTTTCAGATTAAGAACGATAAGAACATAGCTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	107974	108003	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT6;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCGCGAGGTAGGTAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108004	108054	51	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER6;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACTATGTGGTGATTTCTATGTTGTCTACTCGATTTACAGGTAAATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108055	108084	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT7;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTTTCGAGGTTGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108085	108133	49	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER7;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACTTACCGTAAATTAAAAGGAAATGTCACTATTTTTCAGCCGAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108134	108163	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT8;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTTTCAAGGTATATAGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108164	108207	44	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER8;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACTTTTCTTTTCCCTAAACTATTCTTACCGAGTTATGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108208	108237	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT9;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108238	108284	47	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER9;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATAACCCGCTTAGATGATGATTATCCATTCAAGGGTATTTCTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108285	108314	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT10;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGTCCCTCTCGAGGTAGGTAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108315	108355	41	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER10;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACTGCCAAACTTAAATATAACTGCAAACACATTTAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108356	108385	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT11;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCTCGAGGTTGATAGGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108386	108432	47	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER11;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACGCAAACATGCTCTTGACTACCAAGAACCAAGCGAAGACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108433	108462	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT12;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108463	108504	42	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER12;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACCGTAAGGTAGAGGTTGATACGCAGAAGTATGATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108505	108534	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT13;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108535	108580	46	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER13;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTATACAAAACGTTAAGCCTAAAGAAAGGAACGAAATGTCTCAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108581	108610	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT14;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCTCGAGGTTGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108611	108657	47	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER14;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACTTTGCTATTCCAATTGTTATCTCCATTTATCGCCCTAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108658	108687	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT15;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTACCGAGGTTGATAGGTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108688	108732	45	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER15;Parent=SEQF6495.1|RJNE01000005.1_2;Note=TCTATACGAAGTCTTTAAGGGAACGATTGAATCTGATGAATCAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108733	108762	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT16;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGACCCCTCGCGAGGTAGATAGGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108763	108807	45	+	.	ID=SEQF6495.1|RJNE01000005.1_2_SPACER16;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GCTACACTGTTTAAAACTGATTCCGAATCATTTGTGAAAACCGAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108808	108837	30	+	.	ID=SEQF6495.1|RJNE01000005.1_2_REPEAT17;Parent=SEQF6495.1|RJNE01000005.1_2;Note=GTTTCCGGCCCCTCGCGAGGTTGATGGTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	repeat_region	108952	110551	1600	+	.	ID=SEQF6495.1|RJNE01000005.1_3;Genome_ID=SEQF6495.1;Note=Predictor:CCtyper;Start:108952;End:110551;Consensus_Repeat:GTTTCCGGCCCCTCTCGAGGTAGATAGGTATCTATAC;Number_of_Repeats:22;Repeat_Length:37;Average_Spacer_Length:37.4;Repeat_Identity:80.2;Spacer_Identity:44.9;Spacer_Length_Sem:0.8;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.963;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	108952	108988	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT1;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	108989	109025	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER1;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTTATCGCAATATGGATTTTGCTATCAGCTGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109026	109062	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT2;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109063	109107	45	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER2;Parent=SEQF6495.1|RJNE01000005.1_3;Note=TAAAAAACTTATGAGGAAAATCATGATGGCTATTCTATACGATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109108	109144	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT3;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTAGCTAGAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109145	109178	34	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER3;Parent=SEQF6495.1|RJNE01000005.1_3;Note=AAGGAGTTGGAAGATGAATAAGCAGGAATTGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109179	109215	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT4;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGACCCCTTTCGAGGTAGATAGGTGGATATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109216	109251	36	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER4;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTCATTTGAAAATATCAACAAAATTAACTTTATCGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109252	109288	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT5;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGGAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109289	109328	40	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER5;Parent=SEQF6495.1|RJNE01000005.1_3;Note=ATGATACTGGATGGTGGTATGAATACCCTGACGGTTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109329	109365	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT6;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGGAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109366	109405	40	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER6;Parent=SEQF6495.1|RJNE01000005.1_3;Note=ATGATACTGGATGGTGGTATGAATACCCTGACGGTTCTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109406	109442	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT7;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCCCGAAGTAGATAGGTAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109443	109479	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER7;Parent=SEQF6495.1|RJNE01000005.1_3;Note=TCGAAGCCCTCTATACAGTAACTGCGATGGAACTAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109480	109516	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT8;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109517	109561	45	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER8;Parent=SEQF6495.1|RJNE01000005.1_3;Note=TAAAAAACTTATGAGGAAAATCATGATGGCTATTTTATACGATGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109562	109598	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT9;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCGCGAGGTAGATAGGTAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109599	109635	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER9;Parent=SEQF6495.1|RJNE01000005.1_3;Note=ATGACGGCCAACTTGTCACAATTAAAGGGTTTGACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109636	109672	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT10;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGACCCCTCCCGAGGTAGATAGGTAGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109673	109708	36	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER10;Parent=SEQF6495.1|RJNE01000005.1_3;Note=CTACATTGAAAAGGTTGAAAAGGACAACGCTGAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109709	109745	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT11;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTATCCGTCCCCTCTCGAGGTAGATAGGGAGATATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109746	109782	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER11;Parent=SEQF6495.1|RJNE01000005.1_3;Note=AGAACCCAGTTAAGCCAACCTTGGCTCTTAAAACTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109783	109819	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT12;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTGTCTAAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109820	109855	36	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER12;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTAAGTATATCAACGGTGCGATAACATTTAACCGCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109856	109892	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT13;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GGTTTCCGTCCCTCGCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109893	109927	35	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER13;Parent=SEQF6495.1|RJNE01000005.1_3;Note=ACTGAAAAATATCACTATAATATTTTAGTTTATTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109928	109964	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT14;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTTTCGAGGTAGATAGGTGGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	109965	109998	34	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER14;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GAGGATTTGGGATGATTCCAAAATTTAGAGCGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	109999	110035	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT15;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCTCTCGCGAGGTAGATAGGTGGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110036	110069	34	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER15;Parent=SEQF6495.1|RJNE01000005.1_3;Note=AAGGGGTAATCCATATTGAAAATGGTATCTTCTC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110070	110106	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT16;Parent=SEQF6495.1|RJNE01000005.1_3;Note=TTTTCCGGCCCCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110107	110141	35	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER16;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GCCGTAGGAACTATTGTTACTGCAGTTGCACTATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110142	110178	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT17;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCCCGAGGTAAATAGAGGGCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110179	110209	31	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER17;Parent=SEQF6495.1|RJNE01000005.1_3;Note=TCAGTGTTCATATTATTTTGGCCAAAATAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110210	110246	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT18;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGTCCCCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110247	110290	44	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER18;Parent=SEQF6495.1|RJNE01000005.1_3;Note=ATTGTCCGAGCCTCTGACATCAACCAAAAGATGGTTTTGACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110291	110327	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT19;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGTCCTCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110328	110364	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER19;Parent=SEQF6495.1|RJNE01000005.1_3;Note=AATCATTATGGGAAATTTTATCAGCTATCGTTAGACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110365	110401	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT20;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110402	110443	42	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER20;Parent=SEQF6495.1|RJNE01000005.1_3;Note=AATATAATTACTTTAGAAAGGTAGCTAAAATGAAACGTTTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110444	110480	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT21;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	binding_site	110481	110514	34	+	.	ID=SEQF6495.1|RJNE01000005.1_3_SPACER21;Parent=SEQF6495.1|RJNE01000005.1_3;Note=AAAACACCTGCGGTTACTCAATCCGTGTCGCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	direct_repeat	110515	110551	37	+	.	ID=SEQF6495.1|RJNE01000005.1_3_REPEAT22;Parent=SEQF6495.1|RJNE01000005.1_3;Note=GTTTCCGGCCCCTCTCGAGGTAGATAGGTATCTATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6495.1|RJNE01000005.1	CCTyper	OPERON	100215	115279	15065	-	.	ID=SEQF6495.1|RJNE01000005.1@3;Genome_ID=SEQF6495.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Csm6_1_CAS-III,Csm5gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI,AbiEii_0_CAS-III;Positions=99,100,101,102,103,104,105,107,111;E-values=2.80e-78,3.80e-29,7.30e-39,1.80e-74,8.00e-23,4.00e-164,3.80e-27,3.60e-12,1.60e-04;CoverageSeq=0.856,0.504,0.987,0.919,0.921,0.845,0.791,0.862,0.316;CoverageHMM=0.981,0.523,0.984,0.981,0.982,1.0,0.912,0.366,0.415;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	114122	115279	386	-	.	ID=SEQF6495.1|RJNE01000005.1_111_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : AbiEii_0_CAS-III;coding_strand=-;E-value=0.00016;Score=18.1;Coverage_Seq=0.3160621761658031;Coverage_Hmm=0.4154929577464789
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	104517	106805	763	-	.	ID=SEQF6495.1|RJNE01000005.1_104_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=4e-164;Score=544.4;Coverage_Seq=0.8453473132372215;Coverage_Hmm=1.0
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	110975	111364	130	-	.	ID=SEQF6495.1|RJNE01000005.1_107_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.6e-12;Score=42.7;Coverage_Seq=0.8615384615384616;Coverage_Hmm=0.3659305993690852
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	106786	107517	244	-	.	ID=SEQF6495.1|RJNE01000005.1_105_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=3.8e-27;Score=92.7;Coverage_Seq=0.7909836065573771;Coverage_Hmm=0.9123711340206185
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	104136	104516	127	-	.	ID=SEQF6495.1|RJNE01000005.1_103_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=8.000000000000001e-23;Score=78.3;Coverage_Seq=0.9212598425196851;Coverage_Hmm=0.9818181818181818
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	103474	104136	221	-	.	ID=SEQF6495.1|RJNE01000005.1_102_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=1.8e-74;Score=246.9;Coverage_Seq=0.918552036199095;Coverage_Hmm=0.9813953488372092
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	102567	103472	302	-	.	ID=SEQF6495.1|RJNE01000005.1_101_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=7.3e-39;Score=130.6;Coverage_Seq=0.9867549668874173;Coverage_Hmm=0.9841269841269841
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	101476	102570	365	-	.	ID=SEQF6495.1|RJNE01000005.1_100_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.8e-29;Score=99.3;Coverage_Seq=0.5041095890410959;Coverage_Hmm=0.5230352303523035
SEQF6495.1|RJNE01000005.1	CCTyper	CDS	100215	101504	430	-	.	ID=SEQF6495.1|RJNE01000005.1_99_cas;Genome_ID=SEQF6495.1;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=2.8e-78;Score=260.1;Coverage_Seq=0.8558139534883721;Coverage_Hmm=0.9805555555555555