SEQF6526.1|JALDUQ010000001.1	CCTyper	repeat_region	477379	478402	1024	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1;Genome_ID=SEQF6526.1;Note=Predictor:CCtyper;Start:477379;End:478402;Consensus_Repeat:GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Number_of_Repeats:16;Repeat_Length:36;Average_Spacer_Length:29.9;Repeat_Identity:100.0;Spacer_Identity:43.3;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: II-C;Cas_Subtype_Prediction:II-C;Subtype_Probability:0.946;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477379	477414	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT1;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477415	477444	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER1;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=TATTACCCGGTAATAGTCAACCCTTTTTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477445	477480	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT2;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477481	477510	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER2;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GGAGTTGTAGTGGCAAGTTACAGACAACGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477511	477546	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT3;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477547	477575	29	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER3;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=ATCAAATTAAGGGATATTTTCGAATAGGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477576	477611	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT4;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477612	477641	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER4;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=TATCTTCCTAATTCAATGGTCATTGTAGGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477642	477677	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT5;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477678	477707	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER5;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=TGCTTCTAGATTACTCTTTGTAGAGCAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477708	477743	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT6;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477744	477773	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER6;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=CATCACTGTTCACAATGGGCAACAGAGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477774	477809	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT7;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477810	477838	29	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER7;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=CAATTACTAGAAAGTCTAGAACCAGATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477839	477874	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT8;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477875	477904	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER8;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=CGATGAAATGATGCCTGCAATTCAGGTAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477905	477940	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT9;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	477941	477970	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER9;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=CACCAATACGAAACCCTAGATTAACACCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	477971	478006	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT10;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	478007	478036	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER10;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=TTACTGATGTTTCCGCTCTTTGTAATGCCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	478037	478072	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT11;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	478073	478102	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER11;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=ATAAATACGGGGACAGCTTTATCAAAAGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	478103	478138	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT12;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	478139	478168	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER12;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=CTTCACTTATGGTTTTGCCTAGTGAAAAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	478169	478204	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT13;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	478205	478234	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER13;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=TAATGAACGAATAAAGTCAAGCATTTTTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	478235	478270	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT14;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	478271	478300	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER14;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GAAATGGACTGAAGAACTCCAGGACAATGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	478301	478336	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT15;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	binding_site	478337	478366	30	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_SPACER15;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=CGTTCCAAGTCATCCCACTTCCAGGGTTCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	direct_repeat	478367	478402	36	+	.	ID=SEQF6526.1|JALDUQ010000001.1_1_REPEAT16;Parent=SEQF6526.1|JALDUQ010000001.1_1;Note=GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6526.1|JALDUQ010000001.1	CCTyper	OPERON	469729	481163	11435	+	.	ID=SEQF6526.1|JALDUQ010000001.1@20;Genome_ID=SEQF6526.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csm2_0_IIIA,Cas9_0_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_2_CAS-II-A,Cas3HD_0_CAS-I;Positions=434,438,439,440,441,444;E-values=8.10e-05,6.90e-220,6.60e-99,5.70e-32,3.10e-144,1.90e-03;CoverageSeq=0.573,0.733,0.911,0.954,0.994,0.31;CoverageHMM=0.469,0.984,0.996,0.888,1.0,0.433;Strand_Interference=1;Strand_Adaptation=1
SEQF6526.1|JALDUQ010000001.1	CCTyper	CDS	475031	475939	303	+	.	ID=SEQF6526.1|JALDUQ010000001.1_439_cas;Genome_ID=SEQF6526.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=6.6e-99;Score=327.2;Coverage_Seq=0.9108910891089109;Coverage_Hmm=0.9963636363636363
SEQF6526.1|JALDUQ010000001.1	CCTyper	CDS	475944	476267	108	+	.	ID=SEQF6526.1|JALDUQ010000001.1_440_cas;Genome_ID=SEQF6526.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=5.7e-32;Score=107.1;Coverage_Seq=0.9537037037037037;Coverage_Hmm=0.8879310344827587
SEQF6526.1|JALDUQ010000001.1	CCTyper	CDS	479859	481163	435	-	.	ID=SEQF6526.1|JALDUQ010000001.1_444_cas;Genome_ID=SEQF6526.1;Feature_type=CDS;Product=Cas Prediction : Cas3HD_0_CAS-I;coding_strand=-;E-value=0.0019;Score=14.8;Coverage_Seq=0.3103448275862069;Coverage_Hmm=0.43349753694581283
SEQF6526.1|JALDUQ010000001.1	CCTyper	CDS	471488	474853	1122	+	.	ID=SEQF6526.1|JALDUQ010000001.1_438_cas;Genome_ID=SEQF6526.1;Feature_type=CDS;Product=Cas Prediction : Cas9_0_II;coding_strand=+;E-value=6.9e-220;Score=729.2;Coverage_Seq=0.732620320855615;Coverage_Hmm=0.9843373493975903
SEQF6526.1|JALDUQ010000001.1	CCTyper	CDS	469729	469995	89	+	.	ID=SEQF6526.1|JALDUQ010000001.1_434_cas;Genome_ID=SEQF6526.1;Feature_type=CDS;Product=Cas Prediction : Csm2_0_IIIA;coding_strand=+;E-value=8.1e-05;Score=20.2;Coverage_Seq=0.5730337078651685;Coverage_Hmm=0.46875
SEQF6526.1|JALDUQ010000001.1	CCTyper	CDS	476264	477307	348	+	.	ID=SEQF6526.1|JALDUQ010000001.1_441_cas;Genome_ID=SEQF6526.1;Feature_type=CDS;Product=Cas Prediction : Csn2_2_CAS-II-A;coding_strand=+;E-value=3.1e-144;Score=476.8;Coverage_Seq=0.9942528735632183;Coverage_Hmm=1.0