SEQF6561.1|JALDTU010000004.1	CCTyper	repeat_region	44529	44762	234	+	.	ID=SEQF6561.1|JALDTU010000004.1_1;Genome_ID=SEQF6561.1;Note=Predictor:CCtyper;Start:44529;End:44762;Consensus_Repeat:AGGTTTTTGTAGTCTCCAAAATTGTGACCGATAAAACC;Number_of_Repeats:4;Repeat_Length:38;Average_Spacer_Length:27.3;Repeat_Identity:94.9;Spacer_Identity:44.1;Spacer_Length_Sem:0.3;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:VI-A;Subtype_Probability:0.419;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	direct_repeat	44529	44566	38	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_REPEAT1;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=AGGTTTTTGTAGTCTCCAAAATTGTGACCGATAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	binding_site	44567	44594	28	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_SPACER1;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=CTACTTCAGATACTACATATGTTCCTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	direct_repeat	44595	44632	38	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_REPEAT2;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=CAGTTTTTGTAGTCTCCAAAATTGTGACCGATAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	binding_site	44633	44659	27	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_SPACER2;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=GGGTGACTTGGACGCTCTGAAGCGAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	direct_repeat	44660	44697	38	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_REPEAT3;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=AGGTTTTTGTAGTCTCCAAAATTGTGACCGATAAAACG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	binding_site	44698	44724	27	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_SPACER3;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=GTGAAGGCGCTGCTGTACGTACTGCTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000004.1	CCTyper	direct_repeat	44725	44762	38	+	.	ID=SEQF6561.1|JALDTU010000004.1_1_REPEAT4;Parent=SEQF6561.1|JALDTU010000004.1_1;Note=AGGTTTTTGTAGTCTCCAAAATTGTGACCGATAAAACC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	repeat_region	115345	116108	764	+	.	ID=SEQF6561.1|JALDTU010000007.1_2;Genome_ID=SEQF6561.1;Note=Predictor:CCtyper;Start:115345;End:116108;Consensus_Repeat:GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Number_of_Repeats:12;Repeat_Length:36;Average_Spacer_Length:30.2;Repeat_Identity:98.9;Spacer_Identity:42.9;Spacer_Length_Sem:0.1;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115345	115380	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT1;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=TTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115381	115410	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER1;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=AAGCTTGAGCAAGCGCACCTTGCAAGCCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115411	115446	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT2;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115447	115476	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER2;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=TGTGTCCGTTTGAACGTTTCGACGCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115477	115512	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT3;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115513	115542	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER3;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=CATGTATAGTGAAAATAGTGCCGTTATTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115543	115578	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT4;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115579	115608	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER4;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=CTTGTTGGCTGATGTCTTGAATTCGTTCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115609	115644	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT5;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115645	115674	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER5;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=CAGGAATCACAATTCCTGCACATGTCAGGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115675	115710	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT6;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115711	115740	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER6;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=ATGTCAAGCCCATTTCCCCAGCAAATCCAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115741	115776	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT7;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115777	115806	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER7;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=TACCCGTATTACCATCGAATGTTCGAAAAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115807	115842	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT8;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115843	115873	31	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER8;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=AGGTTTCAAGGACAGCGCTGGGCGTAACTGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115874	115909	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT9;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115910	115939	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER9;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=AGAATGTCTTCGGGGGCAAAGTTAAAGGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	115940	115975	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT10;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	115976	116005	30	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER10;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=AGGAACTCCAGCGCCTTGCGAAATAGCAGA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	116006	116041	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT11;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	binding_site	116042	116072	31	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_SPACER11;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=AGTTCGAACGAGAAATTGCTAATGGCGTTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	direct_repeat	116073	116108	36	+	.	ID=SEQF6561.1|JALDTU010000007.1_2_REPEAT12;Parent=SEQF6561.1|JALDTU010000007.1_2;Note=GTTTTGGAACCATTCGAAACAACACAGCTCTAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6561.1|JALDTU010000007.1	CCTyper	OPERON	116199	122203	6005	-	.	ID=SEQF6561.1|JALDTU010000007.1@2;Genome_ID=SEQF6561.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Csn2_1_CAS-II-A,Cas2_5_CAS-I-II-III-IV-V-VI,Cas1_4_CAS-I-II-III-IV-V-VI,Cas9_1_II;Positions=109,110,111,112;E-values=1.00e-100,7.10e-50,2.40e-103,0.00e+00;CoverageSeq=0.982,0.939,0.931,0.994;CoverageHMM=0.995,0.957,0.996,0.998;Strand_Interference=-1;Strand_Adaptation=-1
SEQF6561.1|JALDTU010000007.1	CCTyper	CDS	117192	118058	289	-	.	ID=SEQF6561.1|JALDTU010000007.1_111_cas;Genome_ID=SEQF6561.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=2.4e-103;Score=341.9;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6561.1|JALDTU010000007.1	CCTyper	CDS	116851	117195	115	-	.	ID=SEQF6561.1|JALDTU010000007.1_110_cas;Genome_ID=SEQF6561.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=7.1e-50;Score=164.9;Coverage_Seq=0.9391304347826087;Coverage_Hmm=0.9568965517241379
SEQF6561.1|JALDTU010000007.1	CCTyper	CDS	118058	122203	1382	-	.	ID=SEQF6561.1|JALDTU010000007.1_112_cas;Genome_ID=SEQF6561.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=-;E-value=0.0;Score=1254.2;Coverage_Seq=0.9942112879884226;Coverage_Hmm=0.9982142857142857
SEQF6561.1|JALDTU010000007.1	CCTyper	CDS	116199	116861	221	-	.	ID=SEQF6561.1|JALDTU010000007.1_109_cas;Genome_ID=SEQF6561.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=-;E-value=1e-100;Score=332.7;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973