SEQF6579.1|RJME01000010.1	CCTyper	repeat_region	23462	24421	960	+	.	ID=SEQF6579.1|RJME01000010.1_1;Genome_ID=SEQF6579.1;Note=Predictor:CCtyper;Start:23462;End:24421;Consensus_Repeat:GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Number_of_Repeats:15;Repeat_Length:36;Average_Spacer_Length:30;Repeat_Identity:98.9;Spacer_Identity:43.2;Spacer_Length_Sem:0.0;Trusted:True;Cas_Type_Prediction: Unknown;Cas_Subtype_Prediction:II-A;Subtype_Probability:0.549;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23462	23497	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT1;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23498	23527	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER1;Parent=SEQF6579.1|RJME01000010.1_1;Note=TTGGGGGCGACGTGGCTATTCTAGCGGAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23528	23563	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT2;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23564	23593	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER2;Parent=SEQF6579.1|RJME01000010.1_1;Note=TCAACTTTAGTCGCTTGCAAGGACGTGAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23594	23629	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT3;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23630	23659	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER3;Parent=SEQF6579.1|RJME01000010.1_1;Note=TCTTCAACTTTGGTAGCTTGCAAAGACGTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23660	23695	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT4;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23696	23725	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER4;Parent=SEQF6579.1|RJME01000010.1_1;Note=TAAGGAATTTCAACACGTTGCAGAAAAACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23726	23761	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT5;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23762	23791	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER5;Parent=SEQF6579.1|RJME01000010.1_1;Note=GCAATCTGAACTCGCATTTACAGATGGAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23792	23827	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT6;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23828	23857	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER6;Parent=SEQF6579.1|RJME01000010.1_1;Note=TACTCTGAGATGCTCGGAGGTTGTAACCTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23858	23893	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT7;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23894	23923	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER7;Parent=SEQF6579.1|RJME01000010.1_1;Note=TAGCTATTCATCTTGAAACTGGAGAAACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23924	23959	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT8;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	23960	23989	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER8;Parent=SEQF6579.1|RJME01000010.1_1;Note=ATGTCATGAGCTTCTTTGATTAGAGAAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	23990	24025	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT9;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	24026	24055	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER9;Parent=SEQF6579.1|RJME01000010.1_1;Note=TTTACTGGATGGATTGGCGCTTGATGAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	24056	24091	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT10;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	24092	24121	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER10;Parent=SEQF6579.1|RJME01000010.1_1;Note=AAGGCCTCTGAATAGTGTAAGGATGGCTCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	24122	24157	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT11;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	24158	24187	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER11;Parent=SEQF6579.1|RJME01000010.1_1;Note=ATTTTCTTGATAGCTATTGCTTGTCAAAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	24188	24223	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT12;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	24224	24253	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER12;Parent=SEQF6579.1|RJME01000010.1_1;Note=TTTACAGCTTAAATCCAAGGATTGAGGTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	24254	24289	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT13;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	24290	24319	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER13;Parent=SEQF6579.1|RJME01000010.1_1;Note=ACCACTAAAAGTCATGTTGCTTTTGACTCA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	24320	24355	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT14;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	binding_site	24356	24385	30	+	.	ID=SEQF6579.1|RJME01000010.1_1_SPACER14;Parent=SEQF6579.1|RJME01000010.1_1;Note=GGGCGCCAAGCCAGTGGAAGCGATACCCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	direct_repeat	24386	24421	36	+	.	ID=SEQF6579.1|RJME01000010.1_1_REPEAT15;Parent=SEQF6579.1|RJME01000010.1_1;Note=GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6579.1|RJME01000010.1	CCTyper	OPERON	17334	23371	6038	+	.	ID=SEQF6579.1|RJME01000010.1@1;Genome_ID=SEQF6579.1;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type II-A;Complete_Interference=100%;Complete_Adaptation=100%;Best_type=II-A;Best_score=9.0;Genes=Cas9_1_II,Cas1_4_CAS-I-II-III-IV-V-VI,Cas2_5_CAS-I-II-III-IV-V-VI,Csn2_1_CAS-II-A;Positions=16,17,18,19;E-values=0.00e+00,7.30e-103,1.20e-49,1.10e-99;CoverageSeq=0.994,0.931,0.939,0.982;CoverageHMM=0.998,0.996,0.957,0.995;Strand_Interference=1;Strand_Adaptation=1
SEQF6579.1|RJME01000010.1	CCTyper	CDS	21512	22378	289	+	.	ID=SEQF6579.1|RJME01000010.1_17_cas;Genome_ID=SEQF6579.1;Feature_type=CDS;Product=Cas Prediction : Cas1_4_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=7.3e-103;Score=340.3;Coverage_Seq=0.9307958477508651;Coverage_Hmm=0.9963636363636363
SEQF6579.1|RJME01000010.1	CCTyper	CDS	22375	22719	115	+	.	ID=SEQF6579.1|RJME01000010.1_18_cas;Genome_ID=SEQF6579.1;Feature_type=CDS;Product=Cas Prediction : Cas2_5_CAS-I-II-III-IV-V-VI;coding_strand=+;E-value=1.2e-49;Score=164.2;Coverage_Seq=0.9391304347826087;Coverage_Hmm=0.9568965517241379
SEQF6579.1|RJME01000010.1	CCTyper	CDS	17334	21512	1393	+	.	ID=SEQF6579.1|RJME01000010.1_16_cas;Genome_ID=SEQF6579.1;Feature_type=CDS;Product=Cas Prediction : Cas9_1_II;coding_strand=+;E-value=0.0;Score=1117.8;Coverage_Seq=0.994256999282125;Coverage_Hmm=0.9982142857142857
SEQF6579.1|RJME01000010.1	CCTyper	CDS	22709	23371	221	+	.	ID=SEQF6579.1|RJME01000010.1_19_cas;Genome_ID=SEQF6579.1;Feature_type=CDS;Product=Cas Prediction : Csn2_1_CAS-II-A;coding_strand=+;E-value=1.1e-99;Score=329.3;Coverage_Seq=0.9819004524886877;Coverage_Hmm=0.9954128440366973