SEQF6586.2|AGGI01000176.1	CCTyper	repeat_region	1737	2830	1094	+	.	ID=SEQF6586.2|AGGI01000176.1_1;Genome_ID=SEQF6586.2;Note=Predictor:CCtyper;Start:1737;End:2830;Consensus_Repeat:CCTCGTAAGGGGACGGAAACTTG;Number_of_Repeats:16;Repeat_Length:23;Average_Spacer_Length:48.4;Repeat_Identity:85.2;Spacer_Identity:54.7;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.989;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	1737	1759	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT1;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	1760	1808	49	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER1;Parent=SEQF6586.2|AGGI01000176.1_1;Note=TGGGCTGTATAACGTTCGTATAACGGTAGGCTTATTGAATGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	1809	1831	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT2;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	1832	1879	48	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER2;Parent=SEQF6586.2|AGGI01000176.1_1;Note=ACTGCTGAAAACAGTTCGGTGTTTTTCATTTCATTGAATGCCCCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	1880	1902	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT3;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTTGTAAGGGGACGGAAACGCG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	1903	1949	47	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER3;Parent=SEQF6586.2|AGGI01000176.1_1;Note=TCATCGTTAGGTTTAACCTTTGTATGAGACAATTGAATGCCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	1950	1972	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT4;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	1973	2019	47	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER4;Parent=SEQF6586.2|AGGI01000176.1_1;Note=TCAGTGTCCGGGTCATAGATTTTTCCGTCAAATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2020	2042	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT5;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CTTCGTAAGGGGACGGAAACAGT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2043	2090	48	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER5;Parent=SEQF6586.2|AGGI01000176.1_1;Note=AATTCTTCATGGTCTTTATCACTCATCTCATGATTGAATGCCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2091	2113	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT6;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2114	2161	48	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER6;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCAACAAACGTTCCATGTTCTGTCATACCTTTATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2162	2184	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT7;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACCCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2185	2233	49	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER7;Parent=SEQF6586.2|AGGI01000176.1_1;Note=TGCCAGCCTTTTGACTGGCTCCTTTCTTTATCTATTGAATGCCCCGTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2234	2256	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT8;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACCAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2257	2305	49	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER8;Parent=SEQF6586.2|AGGI01000176.1_1;Note=ATAGTTCATCATGTAAGGGACTCGTCTTAGACCATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2306	2328	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT9;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACGCT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2329	2376	48	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER9;Parent=SEQF6586.2|AGGI01000176.1_1;Note=TTGATGTAGGTTGCGATTGGTGAGATGTAGCGATTGAAAGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2377	2399	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT10;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACGTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2400	2448	49	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER10;Parent=SEQF6586.2|AGGI01000176.1_1;Note=AAGGCTTTTTTGTGGTCCTCAACAGCTTCTAGGATTGAATACCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2449	2471	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT11;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTTT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2472	2520	49	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER11;Parent=SEQF6586.2|AGGI01000176.1_1;Note=ACCTTGGCCAATCTTATGTTAGCCCCTTTCCTTATTGAATACCCCATAG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2521	2543	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT12;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2544	2592	49	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER12;Parent=SEQF6586.2|AGGI01000176.1_1;Note=ATTAAAGATAGCCGTCACTTCTTCGGTTTGTTTATTGAATGCCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2593	2615	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT13;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTTG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2616	2663	48	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER13;Parent=SEQF6586.2|AGGI01000176.1_1;Note=TCATTCATAGGTTGACCGTTCGTTAGTCGTTGATTGAATGTCCCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2664	2686	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT14;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGGCGGAAACATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2687	2734	48	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER14;Parent=SEQF6586.2|AGGI01000176.1_1;Note=AAAACTTCGCCTCGTCGGTCAACTAGTTCATCATTGAAATCCTCATAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2735	2757	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT15;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACGGAAACTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	binding_site	2758	2807	50	+	.	ID=SEQF6586.2|AGGI01000176.1_1_SPACER15;Parent=SEQF6586.2|AGGI01000176.1_1;Note=AGAGTTAAGGCCTTGTCGCCTCTACGAACCAAGAATTGAATGCCCCATAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000176.1	CCTyper	direct_repeat	2808	2830	23	+	.	ID=SEQF6586.2|AGGI01000176.1_1_REPEAT16;Parent=SEQF6586.2|AGGI01000176.1_1;Note=CCTCGTAAGGGGACAGAAATTAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6586.2|AGGI01000090.1	CCTyper	OPERON	25	6583	6559	+	.	ID=SEQF6586.2|AGGI01000090.1@1;Genome_ID=SEQF6586.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=15.0;Genes=Cas10_1_CAS-III,Csm2gr11_7_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm5gr7_0_CAS-III-A-III-D,Csm6_1_CAS-III;Positions=1,2,3,4,5,6;E-values=1.80e-186,3.60e-23,3.70e-72,2.60e-36,1.90e-31,4.90e-77;CoverageSeq=0.819,0.911,0.923,0.983,0.808,0.834;CoverageHMM=0.997,0.982,0.986,0.975,0.792,0.956;Strand_Interference=1;Strand_Adaptation=NA
SEQF6586.2|AGGI01000090.1	CCTyper	CDS	25	2340	772	+	.	ID=SEQF6586.2|AGGI01000090.1_1_cas;Genome_ID=SEQF6586.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=+;E-value=1.8000000000000001e-186;Score=618.5;Coverage_Seq=0.8186528497409327;Coverage_Hmm=0.9969418960244648
SEQF6586.2|AGGI01000090.1	CCTyper	CDS	2321	2689	123	+	.	ID=SEQF6586.2|AGGI01000090.1_2_cas;Genome_ID=SEQF6586.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=+;E-value=3.6e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6586.2|AGGI01000090.1	CCTyper	CDS	2686	3351	222	+	.	ID=SEQF6586.2|AGGI01000090.1_3_cas;Genome_ID=SEQF6586.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=+;E-value=3.7e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6586.2|AGGI01000090.1	CCTyper	CDS	3353	4252	300	+	.	ID=SEQF6586.2|AGGI01000090.1_4_cas;Genome_ID=SEQF6586.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=+;E-value=2.6e-36;Score=122.4;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6586.2|AGGI01000090.1	CCTyper	CDS	4254	5300	349	+	.	ID=SEQF6586.2|AGGI01000090.1_5_cas;Genome_ID=SEQF6586.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=+;E-value=1.9e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6586.2|AGGI01000090.1	CCTyper	CDS	5297	6583	429	+	.	ID=SEQF6586.2|AGGI01000090.1_6_cas;Genome_ID=SEQF6586.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=+;E-value=4.9e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556