SEQF6588.2|AGGG01000002.1	CCTyper	repeat_region	39955	41133	1179	+	.	ID=SEQF6588.2|AGGG01000002.1_1;Genome_ID=SEQF6588.2;Note=Predictor:CCtyper;Start:39955;End:41133;Consensus_Repeat:GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Number_of_Repeats:17;Repeat_Length:36;Average_Spacer_Length:35.4;Repeat_Identity:88.6;Spacer_Identity:44.2;Spacer_Length_Sem:0.2;Trusted:True;Cas_Type_Prediction: III-A;Cas_Subtype_Prediction:III-A;Subtype_Probability:0.971;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	39955	39990	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT1;Parent=SEQF6588.2|AGGG01000002.1_1;Note=ATTTCTGTCCCCTTACGAGGATATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	39991	40027	37	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER1;Parent=SEQF6588.2|AGGG01000002.1_1;Note=TCTTGGTTCGTAGAGGCGACAAGGCCTTAACTCTATA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40028	40063	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT2;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGAGGATTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40064	40098	35	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER2;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GATGAACTAGTTGACCGACGAGGCGAAGTTTTAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40099	40134	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT3;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGCCCCCTTACGAGGGTATGGGACATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40135	40169	35	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER3;Parent=SEQF6588.2|AGGG01000002.1_1;Note=CAACGACTAACGAACGGTCAACCTATGAATGACAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40170	40205	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT4;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40206	40241	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER4;Parent=SEQF6588.2|AGGG01000002.1_1;Note=AAACAAACCGAAGAAGTGACGGCTATCTTTAATCAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40242	40277	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT5;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGTATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40278	40313	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER5;Parent=SEQF6588.2|AGGG01000002.1_1;Note=AAGGAAAGGGGCTAACATAAGATTGGCCAAGGTAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40314	40349	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT6;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGTATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40350	40385	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER6;Parent=SEQF6588.2|AGGG01000002.1_1;Note=CCTAGAAGCTGTTGAGGACCACAAAAAAGCCTTCAC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40386	40421	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT7;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40422	40456	35	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER7;Parent=SEQF6588.2|AGGG01000002.1_1;Note=CGCTACATCTCACCAATCGCAACCTACATCAAAGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40457	40492	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT8;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40493	40528	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER8;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GGTCTAAGACGAGTCCCTTACATGATGAACTATATG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40529	40564	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT9;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGATACGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40565	40600	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER9;Parent=SEQF6588.2|AGGG01000002.1_1;Note=AGATAAAGAAAGGAGCCAGTCAAAAGGCTGGCAAGG;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40601	40636	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT10;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40637	40671	35	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER10;Parent=SEQF6588.2|AGGG01000002.1_1;Note=AAAGGTATGACAGAACATGGAACGTTTGTTGGATT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40672	40707	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT11;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40708	40742	35	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER11;Parent=SEQF6588.2|AGGG01000002.1_1;Note=CATGAGATGAGTGATAAAGACCATGAAGAATTACT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40743	40778	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT12;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAAGGTATGGGGCTTTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40779	40812	34	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER12;Parent=SEQF6588.2|AGGG01000002.1_1;Note=TTGACGGAAAAATCTATGACCCGGACACTGAACA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40813	40848	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT13;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGCTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40849	40882	34	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER13;Parent=SEQF6588.2|AGGG01000002.1_1;Note=TGTCTCATACAAAGGTTAAACCTAACGATGACGC;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40883	40918	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT14;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACAAGGATATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40919	40953	35	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER14;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GAAATGAAAAACACCGAACTGTTTTCAGCAGTTAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	40954	40989	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT15;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	40990	41025	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER15;Parent=SEQF6588.2|AGGG01000002.1_1;Note=AAGCCTACCGTTATACGAACGTTATACAGCCCACTA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	41026	41061	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT16;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	binding_site	41062	41097	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_SPACER16;Parent=SEQF6588.2|AGGG01000002.1_1;Note=TTTGACCAGAGTAAACTATAATAGACAAGAGACAAA;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	direct_repeat	41098	41133	36	+	.	ID=SEQF6588.2|AGGG01000002.1_1_REPEAT17;Parent=SEQF6588.2|AGGG01000002.1_1;Note=GTTTCCGTCCCCTTACGAGGGTATGGGGCATTCAAT;Dbxref=SO:0001459;Ontology_term=CRISPR
SEQF6588.2|AGGG01000002.1	CCTyper	OPERON	32461	42570	10110	-	.	ID=SEQF6588.2|AGGG01000002.1@2;Genome_ID=SEQF6588.2;Product=Cas Operon;Feature_type=OPERON;Note=Cas Prediction: Type III-A;Complete_Interference=100%;Complete_Adaptation=NA;Best_type=III-A;Best_score=18.0;Genes=Csm6_1_CAS-III,Csm5gr7_0_CAS-III-A-III-D,Csm4gr5_1_CAS-III-A,Csm3gr7_1_CAS-III-A-III-D,Csm2gr11_7_CAS-III-A,Cas10_1_CAS-III,Cas6_0_CAS-I-II-III-IV-V-VI,Cas2_2_CAS-I-II-III-IV-V-VI,Cas1_0_CAS-I-II-III-IV-V-VI;Positions=29,30,31,32,33,34,35,36,37;E-values=4.80e-77,1.90e-31,2.50e-36,3.60e-72,3.50e-23,1.80e-186,6.60e-27,8.80e-21,1.50e-80;CoverageSeq=0.834,0.808,0.983,0.923,0.911,0.819,0.751,0.636,0.949;CoverageHMM=0.956,0.792,0.975,0.986,0.982,0.997,0.856,0.873,0.994;Strand_Interference=-1;Strand_Adaptation=NA
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	36704	39019	772	-	.	ID=SEQF6588.2|AGGG01000002.1_34_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Cas10_1_CAS-III;coding_strand=-;E-value=1.8000000000000001e-186;Score=618.5;Coverage_Seq=0.8186528497409327;Coverage_Hmm=0.9969418960244648
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	41566	42570	335	-	.	ID=SEQF6588.2|AGGG01000002.1_37_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Cas1_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=1.5e-80;Score=267.6;Coverage_Seq=0.9492537313432836;Coverage_Hmm=0.9936908517350158
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	41232	41561	110	-	.	ID=SEQF6588.2|AGGG01000002.1_36_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Cas2_2_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=8.8e-21;Score=70.9;Coverage_Seq=0.6363636363636364;Coverage_Hmm=0.8734177215189873
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	39012	39734	241	-	.	ID=SEQF6588.2|AGGG01000002.1_35_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Cas6_0_CAS-I-II-III-IV-V-VI;coding_strand=-;E-value=6.6e-27;Score=92.1;Coverage_Seq=0.7510373443983402;Coverage_Hmm=0.8556701030927835
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	36355	36723	123	-	.	ID=SEQF6588.2|AGGG01000002.1_33_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Csm2gr11_7_CAS-III-A;coding_strand=-;E-value=3.5e-23;Score=79.7;Coverage_Seq=0.9105691056910569;Coverage_Hmm=0.9818181818181818
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	35693	36358	222	-	.	ID=SEQF6588.2|AGGG01000002.1_32_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Csm3gr7_1_CAS-III-A-III-D;coding_strand=-;E-value=3.6e-72;Score=239.6;Coverage_Seq=0.9234234234234234;Coverage_Hmm=0.986046511627907
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	34792	35691	300	-	.	ID=SEQF6588.2|AGGG01000002.1_31_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Csm4gr5_1_CAS-III-A;coding_strand=-;E-value=2.5e-36;Score=122.4;Coverage_Seq=0.9833333333333333;Coverage_Hmm=0.9746031746031746
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	33744	34790	349	-	.	ID=SEQF6588.2|AGGG01000002.1_30_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Csm5gr7_0_CAS-III-A-III-D;coding_strand=-;E-value=1.9e-31;Score=106.6;Coverage_Seq=0.8080229226361032;Coverage_Hmm=0.7917808219178082
SEQF6588.2|AGGG01000002.1	CCTyper	CDS	32461	33747	429	-	.	ID=SEQF6588.2|AGGG01000002.1_29_cas;Genome_ID=SEQF6588.2;Feature_type=CDS;Product=Cas Prediction : Csm6_1_CAS-III;coding_strand=-;E-value=4.8e-77;Score=256.2;Coverage_Seq=0.8344988344988346;Coverage_Hmm=0.9555555555555556